EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMPUG00000001064 (Gene tree)
Gene ID: 101681145
Gene Symbol: UPF2
Alias: DKFZP434D222|KIAA1408|RENT2|smg-3
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Mustela_putorius_furo
Status: putative
Strand: Plus strand
Length: 110286 bases
Position: chrGL897101.1:3112271-3222556
Accession: 101681145
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMPUP00000001056	Upf2	PF04050.14	3.8e-33	1	1
ENSMPUP00000001056	MIF4G	PF02854.19	3.5e-76	1	3
ENSMPUP00000001056	MIF4G	PF02854.19	3.5e-76	2	3
ENSMPUP00000001056	MIF4G	PF02854.19	3.5e-76	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMPUT00000001077	UPF2-201	5845	-	ENSMPUP00000001056	1271 (aa)	XP_012902484	M3XPQ6

Gene Model

Click here to download ENSMPUG00000001064's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMPUG00000001064's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMPUG00000001064	UPF2	100	97.720	ENSG00000151461	UPF2	100	97.720	Homo_sapiens
ENSMPUG00000001064	UPF2	99	78.857	ENSAPOG00000015837	UPF2	100	78.700	Acanthochromis_polyacanthus
ENSMPUG00000001064	UPF2	100	99.528	ENSAMEG00000004586	UPF2	100	99.528	Ailuropoda_melanoleuca
ENSMPUG00000001064	UPF2	99	82.812	ENSACIG00000018078	UPF2	100	82.734	Amphilophus_citrinellus
ENSMPUG00000001064	UPF2	100	82.995	ENSAOCG00000016766	UPF2	100	83.073	Amphiprion_ocellaris
ENSMPUG00000001064	UPF2	100	83.073	ENSAPEG00000019084	UPF2	100	83.151	Amphiprion_percula
ENSMPUG00000001064	UPF2	100	82.893	ENSATEG00000021677	UPF2	99	82.944	Anabas_testudineus
ENSMPUG00000001064	UPF2	100	87.186	ENSAPLG00000010287	UPF2	90	91.573	Anas_platyrhynchos
ENSMPUG00000001064	UPF2	100	92.526	ENSACAG00000009259	UPF2	100	92.526	Anolis_carolinensis
ENSMPUG00000001064	UPF2	99	87.736	ENSANAG00000028451	UPF2	99	86.478	Aotus_nancymaae
ENSMPUG00000001064	UPF2	100	81.357	ENSACLG00000012696	UPF2	100	82.995	Astatotilapia_calliptera
ENSMPUG00000001064	UPF2	99	83.490	ENSAMXG00000013700	UPF2	99	83.881	Astyanax_mexicanus
ENSMPUG00000001064	UPF2	100	98.820	ENSBTAG00000000288	UPF2	100	98.820	Bos_taurus
ENSMPUG00000001064	UPF2	100	97.720	ENSCJAG00000020685	UPF2	100	97.720	Callithrix_jacchus
ENSMPUG00000001064	UPF2	100	99.371	ENSCAFG00000004839	UPF2	100	99.371	Canis_familiaris
ENSMPUG00000001064	UPF2	99	96.927	ENSCAFG00020005882	UPF2	98	99.110	Canis_lupus_dingo
ENSMPUG00000001064	UPF2	100	98.899	ENSCHIG00000020359	UPF2	100	98.899	Capra_hircus
ENSMPUG00000001064	UPF2	100	97.640	ENSTSYG00000000935	UPF2	100	97.640	Carlito_syrichta
ENSMPUG00000001064	UPF2	91	87.522	ENSCAPG00000016658	UPF2	94	87.058	Cavia_aperea
ENSMPUG00000001064	UPF2	99	95.956	ENSCPOG00000008809	UPF2	99	95.956	Cavia_porcellus
ENSMPUG00000001064	UPF2	100	91.424	ENSCCAG00000035991	UPF2	100	91.424	Cebus_capucinus
ENSMPUG00000001064	UPF2	100	97.877	ENSCATG00000032679	UPF2	100	97.877	Cercocebus_atys
ENSMPUG00000001064	UPF2	100	97.718	ENSCLAG00000011434	UPF2	100	97.718	Chinchilla_lanigera
ENSMPUG00000001064	UPF2	100	97.956	ENSCSAG00000013372	UPF2	100	97.956	Chlorocebus_sabaeus
ENSMPUG00000001064	UPF2	87	98.884	ENSCHOG00000000422	UPF2	89	98.884	Choloepus_hoffmanni
ENSMPUG00000001064	UPF2	99	92.356	ENSCPBG00000027823	UPF2	100	93.065	Chrysemys_picta_bellii
ENSMPUG00000001064	UPF2	79	48.963	ENSCSAVG00000007772	-	79	50.318	Ciona_savignyi
ENSMPUG00000001064	UPF2	99	91.484	ENSCANG00000040396	UPF2	100	92.132	Colobus_angolensis_palliatus
ENSMPUG00000001064	UPF2	100	98.269	ENSCGRG00001019347	Upf2	100	98.269	Cricetulus_griseus_chok1gshd
ENSMPUG00000001064	UPF2	100	98.269	ENSCGRG00000017993	Upf2	100	98.269	Cricetulus_griseus_crigri
ENSMPUG00000001064	UPF2	91	81.121	ENSCSEG00000003520	UPF2	91	80.567	Cynoglossus_semilaevis
ENSMPUG00000001064	UPF2	99	82.875	ENSCVAG00000006167	UPF2	100	82.325	Cyprinodon_variegatus
ENSMPUG00000001064	UPF2	100	98.741	ENSDNOG00000018160	UPF2	100	98.741	Dasypus_novemcinctus
ENSMPUG00000001064	UPF2	100	97.482	ENSDORG00000002478	Upf2	100	97.482	Dipodomys_ordii
ENSMPUG00000001064	UPF2	89	36.469	FBgn0029992	Upf2	82	43.860	Drosophila_melanogaster
ENSMPUG00000001064	UPF2	72	100.000	ENSETEG00000011583	-	66	100.000	Echinops_telfairi
ENSMPUG00000001064	UPF2	69	68.507	ENSEBUG00000012448	-	87	72.483	Eptatretus_burgeri
ENSMPUG00000001064	UPF2	100	98.820	ENSEASG00005019274	UPF2	100	99.383	Equus_asinus_asinus
ENSMPUG00000001064	UPF2	100	98.899	ENSECAG00000017022	UPF2	100	98.899	Equus_caballus
ENSMPUG00000001064	UPF2	82	95.208	ENSEEUG00000007819	UPF2	82	95.208	Erinaceus_europaeus
ENSMPUG00000001064	UPF2	99	81.704	ENSELUG00000012014	UPF2	100	82.037	Esox_lucius
ENSMPUG00000001064	UPF2	100	99.448	ENSFCAG00000005785	UPF2	100	99.213	Felis_catus
ENSMPUG00000001064	UPF2	100	94.020	ENSFALG00000001889	UPF2	98	94.020	Ficedula_albicollis
ENSMPUG00000001064	UPF2	100	97.404	ENSFDAG00000014348	UPF2	100	97.404	Fukomys_damarensis
ENSMPUG00000001064	UPF2	99	83.478	ENSFHEG00000009826	UPF2	99	83.056	Fundulus_heteroclitus
ENSMPUG00000001064	UPF2	91	83.851	ENSGMOG00000005557	UPF2	91	83.549	Gadus_morhua
ENSMPUG00000001064	UPF2	100	94.182	ENSGALG00000033772	UPF2	100	94.182	Gallus_gallus
ENSMPUG00000001064	UPF2	100	80.109	ENSGAFG00000020867	UPF2	100	81.981	Gambusia_affinis
ENSMPUG00000001064	UPF2	90	84.469	ENSGACG00000001080	UPF2	100	82.578	Gasterosteus_aculeatus
ENSMPUG00000001064	UPF2	100	93.548	ENSGAGG00000002700	UPF2	100	93.548	Gopherus_agassizii
ENSMPUG00000001064	UPF2	100	97.720	ENSGGOG00000001479	UPF2	100	97.720	Gorilla_gorilla
ENSMPUG00000001064	UPF2	100	81.201	ENSHBUG00000004249	UPF2	100	82.969	Haplochromis_burtoni
ENSMPUG00000001064	UPF2	99	86.299	ENSHGLG00000003822	-	99	85.197	Heterocephalus_glaber_female
ENSMPUG00000001064	UPF2	100	97.718	ENSHGLG00000015176	-	100	97.718	Heterocephalus_glaber_female
ENSMPUG00000001064	UPF2	99	94.484	ENSHGLG00100010036	UPF2	89	98.383	Heterocephalus_glaber_male
ENSMPUG00000001064	UPF2	100	80.808	ENSHCOG00000004025	UPF2	99	80.808	Hippocampus_comes
ENSMPUG00000001064	UPF2	100	82.137	ENSIPUG00000015524	UPF2	100	82.436	Ictalurus_punctatus
ENSMPUG00000001064	UPF2	100	98.033	ENSSTOG00000013075	UPF2	100	98.033	Ictidomys_tridecemlineatus
ENSMPUG00000001064	UPF2	100	96.696	ENSJJAG00000004913	Upf2	100	96.696	Jaculus_jaculus
ENSMPUG00000001064	UPF2	92	84.936	ENSKMAG00000001071	UPF2	99	82.884	Kryptolebias_marmoratus
ENSMPUG00000001064	UPF2	100	83.450	ENSLBEG00000016394	-	99	83.502	Labrus_bergylta
ENSMPUG00000001064	UPF2	80	83.104	ENSLBEG00000000728	-	93	83.202	Labrus_bergylta
ENSMPUG00000001064	UPF2	99	79.702	ENSLACG00000015945	UPF2	100	79.937	Latimeria_chalumnae
ENSMPUG00000001064	UPF2	99	86.446	ENSLOCG00000015698	UPF2	100	86.367	Lepisosteus_oculatus
ENSMPUG00000001064	UPF2	100	97.799	ENSMFAG00000043865	UPF2	100	97.799	Macaca_fascicularis
ENSMPUG00000001064	UPF2	100	97.799	ENSMMUG00000008241	UPF2	100	97.799	Macaca_mulatta
ENSMPUG00000001064	UPF2	81	96.976	ENSMNEG00000008062	UPF2	100	96.976	Macaca_nemestrina
ENSMPUG00000001064	UPF2	95	100.000	ENSMLEG00000036120	UPF2	100	100.000	Mandrillus_leucophaeus
ENSMPUG00000001064	UPF2	100	82.504	ENSMAMG00000018276	UPF2	100	82.632	Mastacembelus_armatus
ENSMPUG00000001064	UPF2	100	81.357	ENSMZEG00005021595	UPF2	100	82.995	Maylandia_zebra
ENSMPUG00000001064	UPF2	99	93.470	ENSMGAG00000004573	UPF2	99	93.470	Meleagris_gallopavo
ENSMPUG00000001064	UPF2	100	95.909	ENSMAUG00000016512	Upf2	100	95.909	Mesocricetus_auratus
ENSMPUG00000001064	UPF2	95	99.490	ENSMICG00000001716	UPF2	99	99.482	Microcebus_murinus
ENSMPUG00000001064	UPF2	100	97.168	ENSMOCG00000008263	Upf2	100	97.168	Microtus_ochrogaster
ENSMPUG00000001064	UPF2	90	83.203	ENSMMOG00000006528	UPF2	100	79.437	Mola_mola
ENSMPUG00000001064	UPF2	100	96.381	ENSMODG00000016794	UPF2	100	96.381	Monodelphis_domestica
ENSMPUG00000001064	UPF2	99	82.799	ENSMALG00000002663	UPF2	100	82.694	Monopterus_albus
ENSMPUG00000001064	UPF2	100	97.404	MGP_CAROLIEiJ_G0023157	Upf2	100	98.476	Mus_caroli
ENSMPUG00000001064	UPF2	100	97.404	ENSMUSG00000043241	Upf2	100	97.404	Mus_musculus
ENSMPUG00000001064	UPF2	100	97.168	MGP_PahariEiJ_G0019217	Upf2	100	97.524	Mus_pahari
ENSMPUG00000001064	UPF2	100	97.640	MGP_SPRETEiJ_G0024075	Upf2	100	97.905	Mus_spretus
ENSMPUG00000001064	UPF2	99	98.272	ENSMLUG00000000228	UPF2	100	98.272	Myotis_lucifugus
ENSMPUG00000001064	UPF2	100	81.357	ENSNBRG00000013629	UPF2	100	82.995	Neolamprologus_brichardi
ENSMPUG00000001064	UPF2	100	97.720	ENSNLEG00000012058	UPF2	100	97.720	Nomascus_leucogenys
ENSMPUG00000001064	UPF2	56	97.927	ENSMEUG00000002180	-	54	97.927	Notamacropus_eugenii
ENSMPUG00000001064	UPF2	82	100.000	ENSOPRG00000006801	-	77	100.000	Ochotona_princeps
ENSMPUG00000001064	UPF2	100	97.246	ENSODEG00000001290	UPF2	100	97.246	Octodon_degus
ENSMPUG00000001064	UPF2	100	81.435	ENSONIG00000017991	UPF2	100	83.073	Oreochromis_niloticus
ENSMPUG00000001064	UPF2	99	97.414	ENSOCUG00000006230	UPF2	100	97.414	Oryctolagus_cuniculus
ENSMPUG00000001064	UPF2	100	81.634	ENSORLG00000017189	UPF2	100	81.825	Oryzias_latipes
ENSMPUG00000001064	UPF2	100	81.634	ENSORLG00020005969	UPF2	100	81.825	Oryzias_latipes_hni
ENSMPUG00000001064	UPF2	100	81.634	ENSORLG00015005713	UPF2	100	81.825	Oryzias_latipes_hsok
ENSMPUG00000001064	UPF2	99	78.237	ENSOMEG00000023420	UPF2	98	79.124	Oryzias_melastigma
ENSMPUG00000001064	UPF2	100	97.640	ENSOGAG00000005796	UPF2	100	97.640	Otolemur_garnettii
ENSMPUG00000001064	UPF2	100	98.743	ENSOARG00000014587	UPF2	100	98.743	Ovis_aries
ENSMPUG00000001064	UPF2	99	93.745	ENSPPAG00000037953	UPF2	100	94.488	Pan_paniscus
ENSMPUG00000001064	UPF2	100	99.213	ENSPPRG00000000690	UPF2	100	99.213	Panthera_pardus
ENSMPUG00000001064	UPF2	100	99.213	ENSPTIG00000008867	UPF2	100	99.213	Panthera_tigris_altaica
ENSMPUG00000001064	UPF2	100	97.720	ENSPTRG00000002291	UPF2	100	97.720	Pan_troglodytes
ENSMPUG00000001064	UPF2	100	97.877	ENSPANG00000023399	UPF2	100	97.877	Papio_anubis
ENSMPUG00000001064	UPF2	100	81.981	ENSPKIG00000025502	UPF2	100	81.123	Paramormyrops_kingsleyae
ENSMPUG00000001064	UPF2	59	92.297	ENSPSIG00000015158	UPF2	95	92.297	Pelodiscus_sinensis
ENSMPUG00000001064	UPF2	99	80.361	ENSPMGG00000005259	UPF2	100	81.618	Periophthalmus_magnuspinnatus
ENSMPUG00000001064	UPF2	93	95.918	ENSPEMG00000015731	Upf2	99	95.918	Peromyscus_maniculatus_bairdii
ENSMPUG00000001064	UPF2	100	96.066	ENSPCIG00000006656	UPF2	100	96.066	Phascolarctos_cinereus
ENSMPUG00000001064	UPF2	100	80.265	ENSPFOG00000017118	UPF2	100	82.293	Poecilia_formosa
ENSMPUG00000001064	UPF2	100	80.265	ENSPLAG00000005094	UPF2	100	82.293	Poecilia_latipinna
ENSMPUG00000001064	UPF2	100	80.265	ENSPMEG00000017009	UPF2	100	82.293	Poecilia_mexicana
ENSMPUG00000001064	UPF2	99	80.188	ENSPREG00000021880	UPF2	100	82.381	Poecilia_reticulata
ENSMPUG00000001064	UPF2	66	99.282	ENSPPYG00000002089	-	100	99.282	Pongo_abelii
ENSMPUG00000001064	UPF2	100	84.264	ENSPCAG00000000684	UPF2	100	84.264	Procavia_capensis
ENSMPUG00000001064	UPF2	99	95.035	ENSPCOG00000021656	UPF2	100	95.114	Propithecus_coquereli
ENSMPUG00000001064	UPF2	100	91.195	ENSPVAG00000017286	UPF2	100	91.195	Pteropus_vampyrus
ENSMPUG00000001064	UPF2	99	78.906	ENSPNYG00000017096	UPF2	100	80.547	Pundamilia_nyererei
ENSMPUG00000001064	UPF2	100	83.463	ENSPNAG00000009357	UPF2	100	84.009	Pygocentrus_nattereri
ENSMPUG00000001064	UPF2	99	91.680	ENSRNOG00000023593	Upf2	100	100.000	Rattus_norvegicus
ENSMPUG00000001064	UPF2	99	96.769	ENSRBIG00000037780	UPF2	100	96.769	Rhinopithecus_bieti
ENSMPUG00000001064	UPF2	100	97.720	ENSRROG00000043547	UPF2	100	97.720	Rhinopithecus_roxellana
ENSMPUG00000001064	UPF2	100	97.484	ENSSBOG00000020012	UPF2	100	97.484	Saimiri_boliviensis_boliviensis
ENSMPUG00000001064	UPF2	100	81.839	ENSSFOG00015023788	upf2	100	83.087	Scleropages_formosus
ENSMPUG00000001064	UPF2	90	83.088	ENSSMAG00000007637	UPF2	100	79.380	Scophthalmus_maximus
ENSMPUG00000001064	UPF2	100	82.917	ENSSDUG00000017244	UPF2	99	83.073	Seriola_dumerili
ENSMPUG00000001064	UPF2	99	81.206	ENSSLDG00000016866	UPF2	100	81.441	Seriola_lalandi_dorsalis
ENSMPUG00000001064	UPF2	100	96.381	ENSSARG00000008615	UPF2	100	96.381	Sorex_araneus
ENSMPUG00000001064	UPF2	99	90.709	ENSSPUG00000014544	UPF2	99	90.709	Sphenodon_punctatus
ENSMPUG00000001064	UPF2	68	99.194	ENSSSCG00000011117	-	100	99.194	Sus_scrofa
ENSMPUG00000001064	UPF2	99	94.006	ENSTGUG00000002163	-	100	94.006	Taeniopygia_guttata
ENSMPUG00000001064	UPF2	100	82.477	ENSTRUG00000007519	UPF2	99	82.449	Takifugu_rubripes
ENSMPUG00000001064	UPF2	93	90.262	ENSTBEG00000012679	UPF2	93	90.601	Tupaia_belangeri
ENSMPUG00000001064	UPF2	100	98.505	ENSTTRG00000016388	UPF2	100	98.505	Tursiops_truncatus
ENSMPUG00000001064	UPF2	94	100.000	ENSUAMG00000023560	UPF2	100	99.432	Ursus_americanus
ENSMPUG00000001064	UPF2	100	99.528	ENSUMAG00000012953	UPF2	95	99.528	Ursus_maritimus
ENSMPUG00000001064	UPF2	85	96.774	ENSVPAG00000006763	UPF2	85	96.774	Vicugna_pacos
ENSMPUG00000001064	UPF2	100	99.292	ENSVVUG00000006166	UPF2	100	99.292	Vulpes_vulpes
ENSMPUG00000001064	UPF2	100	82.629	ENSXETG00000033103	UPF2	100	81.846	Xenopus_tropicalis
ENSMPUG00000001064	UPF2	92	84.701	ENSXCOG00000011604	UPF2	100	81.953	Xiphophorus_couchianus
ENSMPUG00000001064	UPF2	92	85.068	ENSXMAG00000017209	UPF2	100	81.981	Xiphophorus_maculatus