EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMPUG00000002412 (Gene tree)
Gene ID: 101676787
Gene Symbol: R3HDM1
Alias: KIAA0029|R3HDM
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Mustela_putorius_furo
Status: putative
Strand: Minus strand
Length: 196743 bases
Position: chrGL897092.1:1994185-2190927
Accession: 101676787
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMPUP00000002386	R3H	PF01424.22	1.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMPUT00000002435	R3HDM1-201	3743	-	ENSMPUP00000002386	1100 (aa)	XP_004774313	M3XTI6

Gene Model

Click here to download ENSMPUG00000002412's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMPUG00000002412's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMPUG00000002412	R3HDM1	67	49.015	ENSMPUG00000002971	ARPP21	52	58.901
ENSMPUG00000002412	R3HDM1	98	46.841	ENSMPUG00000001818	R3HDM2	97	47.542

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMPUG00000002412	R3HDM1	100	94.832	ENSG00000048991	R3HDM1	100	94.651	Homo_sapiens
ENSMPUG00000002412	R3HDM1	92	47.227	ENSAPOG00000020850	r3hdm1	99	46.883	Acanthochromis_polyacanthus
ENSMPUG00000002412	R3HDM1	100	98.640	ENSAMEG00000014886	R3HDM1	100	98.640	Ailuropoda_melanoleuca
ENSMPUG00000002412	R3HDM1	89	47.097	ENSAOCG00000005192	r3hdm1	99	46.753	Amphiprion_ocellaris
ENSMPUG00000002412	R3HDM1	89	46.845	ENSAPEG00000016108	r3hdm1	99	46.866	Amphiprion_percula
ENSMPUG00000002412	R3HDM1	89	45.627	ENSATEG00000000232	r3hdm1	99	46.266	Anabas_testudineus
ENSMPUG00000002412	R3HDM1	100	79.566	ENSAPLG00000015231	R3HDM1	100	79.656	Anas_platyrhynchos
ENSMPUG00000002412	R3HDM1	100	76.795	ENSACAG00000001676	R3HDM1	100	77.758	Anolis_carolinensis
ENSMPUG00000002412	R3HDM1	100	95.290	ENSANAG00000035334	R3HDM1	100	95.290	Aotus_nancymaae
ENSMPUG00000002412	R3HDM1	79	50.270	ENSACLG00000027282	r3hdm1	94	50.162	Astatotilapia_calliptera
ENSMPUG00000002412	R3HDM1	93	62.731	ENSAMXG00000003536	r3hdm1	100	62.791	Astyanax_mexicanus
ENSMPUG00000002412	R3HDM1	93	72.902	ENSAMXG00000012861	R3HDM1	100	61.140	Astyanax_mexicanus
ENSMPUG00000002412	R3HDM1	100	93.392	ENSBTAG00000013302	R3HDM1	100	93.216	Bos_taurus
ENSMPUG00000002412	R3HDM1	100	95.372	ENSCJAG00000011718	R3HDM1	100	95.372	Callithrix_jacchus
ENSMPUG00000002412	R3HDM1	100	98.731	ENSCAFG00000005075	R3HDM1	100	98.731	Canis_familiaris
ENSMPUG00000002412	R3HDM1	100	98.640	ENSCAFG00020016119	R3HDM1	100	98.640	Canis_lupus_dingo
ENSMPUG00000002412	R3HDM1	100	96.094	ENSCHIG00000020851	R3HDM1	100	96.094	Capra_hircus
ENSMPUG00000002412	R3HDM1	100	89.895	ENSCPOG00000012784	R3HDM1	100	89.807	Cavia_porcellus
ENSMPUG00000002412	R3HDM1	100	94.923	ENSCCAG00000027199	R3HDM1	100	94.923	Cebus_capucinus
ENSMPUG00000002412	R3HDM1	100	94.651	ENSCATG00000023642	R3HDM1	100	94.470	Cercocebus_atys
ENSMPUG00000002412	R3HDM1	100	89.710	ENSCLAG00000007962	R3HDM1	100	90.033	Chinchilla_lanigera
ENSMPUG00000002412	R3HDM1	100	91.243	ENSCSAG00000016356	R3HDM1	100	91.645	Chlorocebus_sabaeus
ENSMPUG00000002412	R3HDM1	87	84.615	ENSCHOG00000013638	R3HDM1	91	84.615	Choloepus_hoffmanni
ENSMPUG00000002412	R3HDM1	88	80.556	ENSCPBG00000009645	R3HDM1	100	91.144	Chrysemys_picta_bellii
ENSMPUG00000002412	R3HDM1	100	94.475	ENSCANG00000034748	R3HDM1	100	94.293	Colobus_angolensis_palliatus
ENSMPUG00000002412	R3HDM1	99	89.144	ENSCGRG00001012357	R3hdm1	97	89.056	Cricetulus_griseus_chok1gshd
ENSMPUG00000002412	R3HDM1	99	91.727	ENSCGRG00000012080	R3hdm1	100	91.362	Cricetulus_griseus_crigri
ENSMPUG00000002412	R3HDM1	89	43.195	ENSCSEG00000008944	r3hdm1	93	53.558	Cynoglossus_semilaevis
ENSMPUG00000002412	R3HDM1	89	48.596	ENSCVAG00000007582	r3hdm1	99	48.299	Cyprinodon_variegatus
ENSMPUG00000002412	R3HDM1	64	36.388	ENSDARG00000061081	arpp21	88	36.240	Danio_rerio
ENSMPUG00000002412	R3HDM1	100	91.877	ENSDNOG00000000771	R3HDM1	100	91.877	Dasypus_novemcinctus
ENSMPUG00000002412	R3HDM1	100	84.029	ENSETEG00000013606	R3HDM1	100	84.392	Echinops_telfairi
ENSMPUG00000002412	R3HDM1	66	41.293	ENSEBUG00000014746	arpp21	97	42.489	Eptatretus_burgeri
ENSMPUG00000002412	R3HDM1	100	97.094	ENSEASG00005007392	R3HDM1	100	97.094	Equus_asinus_asinus
ENSMPUG00000002412	R3HDM1	100	97.366	ENSECAG00000019114	R3HDM1	100	97.366	Equus_caballus
ENSMPUG00000002412	R3HDM1	91	87.823	ENSEEUG00000012589	R3HDM1	91	87.454	Erinaceus_europaeus
ENSMPUG00000002412	R3HDM1	93	50.901	ENSELUG00000014413	r3hdm1	100	51.982	Esox_lucius
ENSMPUG00000002412	R3HDM1	94	55.288	ENSELUG00000004909	R3HDM1	99	55.192	Esox_lucius
ENSMPUG00000002412	R3HDM1	100	98.456	ENSFCAG00000027113	R3HDM1	100	98.456	Felis_catus
ENSMPUG00000002412	R3HDM1	75	72.579	ENSFALG00000013731	R3HDM1	72	72.929	Ficedula_albicollis
ENSMPUG00000002412	R3HDM1	100	89.367	ENSFDAG00000016478	R3HDM1	99	95.203	Fukomys_damarensis
ENSMPUG00000002412	R3HDM1	89	47.186	ENSFHEG00000018713	r3hdm1	100	47.271	Fundulus_heteroclitus
ENSMPUG00000002412	R3HDM1	57	64.783	ENSGMOG00000006042	-	74	64.783	Gadus_morhua
ENSMPUG00000002412	R3HDM1	100	55.632	ENSGALG00000012246	R3HDM1	99	85.902	Gallus_gallus
ENSMPUG00000002412	R3HDM1	79	49.516	ENSGAFG00000006203	r3hdm1	94	50.109	Gambusia_affinis
ENSMPUG00000002412	R3HDM1	87	47.913	ENSGACG00000014925	r3hdm1	99	47.669	Gasterosteus_aculeatus
ENSMPUG00000002412	R3HDM1	100	78.552	ENSGAGG00000007840	R3HDM1	100	78.009	Gopherus_agassizii
ENSMPUG00000002412	R3HDM1	100	94.560	ENSGGOG00000008156	R3HDM1	100	94.379	Gorilla_gorilla
ENSMPUG00000002412	R3HDM1	100	90.300	ENSHGLG00000015718	R3HDM1	99	95.387	Heterocephalus_glaber_female
ENSMPUG00000002412	R3HDM1	100	90.035	ENSHGLG00100003184	-	100	90.035	Heterocephalus_glaber_male
ENSMPUG00000002412	R3HDM1	100	70.182	ENSHGLG00100015374	-	100	70.182	Heterocephalus_glaber_male
ENSMPUG00000002412	R3HDM1	79	45.154	ENSHCOG00000013366	r3hdm1	88	59.750	Hippocampus_comes
ENSMPUG00000002412	R3HDM1	81	66.587	ENSIPUG00000001676	R3HDM1	99	66.507	Ictalurus_punctatus
ENSMPUG00000002412	R3HDM1	85	67.771	ENSIPUG00000013629	r3hdm1	95	69.375	Ictalurus_punctatus
ENSMPUG00000002412	R3HDM1	100	95.104	ENSSTOG00000007572	R3HDM1	99	97.232	Ictidomys_tridecemlineatus
ENSMPUG00000002412	R3HDM1	95	71.274	ENSLACG00000005334	R3HDM1	100	71.480	Latimeria_chalumnae
ENSMPUG00000002412	R3HDM1	100	66.637	ENSLOCG00000001641	r3hdm1	100	66.103	Lepisosteus_oculatus
ENSMPUG00000002412	R3HDM1	100	92.423	ENSLAFG00000009065	R3HDM1	100	92.423	Loxodonta_africana
ENSMPUG00000002412	R3HDM1	100	94.832	ENSMFAG00000030331	R3HDM1	100	97.783	Macaca_fascicularis
ENSMPUG00000002412	R3HDM1	100	94.651	ENSMMUG00000009844	R3HDM1	100	94.470	Macaca_mulatta
ENSMPUG00000002412	R3HDM1	100	94.651	ENSMNEG00000027793	R3HDM1	100	97.783	Macaca_nemestrina
ENSMPUG00000002412	R3HDM1	100	94.923	ENSMLEG00000043189	R3HDM1	100	94.742	Mandrillus_leucophaeus
ENSMPUG00000002412	R3HDM1	89	49.136	ENSMAMG00000004532	r3hdm1	93	58.621	Mastacembelus_armatus
ENSMPUG00000002412	R3HDM1	89	49.128	ENSMZEG00005003157	r3hdm1	93	57.824	Maylandia_zebra
ENSMPUG00000002412	R3HDM1	100	79.005	ENSMGAG00000012461	R3HDM1	100	78.914	Meleagris_gallopavo
ENSMPUG00000002412	R3HDM1	100	88.772	ENSMAUG00000010315	R3hdm1	100	91.694	Mesocricetus_auratus
ENSMPUG00000002412	R3HDM1	96	69.953	ENSMICG00000042655	-	100	89.204	Microcebus_murinus
ENSMPUG00000002412	R3HDM1	100	94.389	ENSMICG00000005900	-	100	94.389	Microcebus_murinus
ENSMPUG00000002412	R3HDM1	89	79.119	ENSMODG00000000923	R3HDM1	96	79.023	Monodelphis_domestica
ENSMPUG00000002412	R3HDM1	99	46.413	ENSMALG00000009000	r3hdm1	100	46.221	Monopterus_albus
ENSMPUG00000002412	R3HDM1	100	88.370	MGP_CAROLIEiJ_G0014543	R3hdm1	99	93.727	Mus_caroli
ENSMPUG00000002412	R3HDM1	100	88.458	ENSMUSG00000056211	R3hdm1	99	93.727	Mus_musculus
ENSMPUG00000002412	R3HDM1	100	88.282	MGP_PahariEiJ_G0027779	R3hdm1	99	93.173	Mus_pahari
ENSMPUG00000002412	R3HDM1	100	88.634	MGP_SPRETEiJ_G0015350	R3hdm1	99	93.911	Mus_spretus
ENSMPUG00000002412	R3HDM1	100	95.298	ENSMLUG00000013824	R3HDM1	100	95.298	Myotis_lucifugus
ENSMPUG00000002412	R3HDM1	100	94.651	ENSNLEG00000008622	R3HDM1	100	94.470	Nomascus_leucogenys
ENSMPUG00000002412	R3HDM1	89	73.802	ENSMEUG00000011784	R3HDM1	100	73.700	Notamacropus_eugenii
ENSMPUG00000002412	R3HDM1	100	89.261	ENSODEG00000008607	R3HDM1	100	91.362	Octodon_degus
ENSMPUG00000002412	R3HDM1	95	48.235	ENSONIG00000012017	r3hdm1	98	48.015	Oreochromis_niloticus
ENSMPUG00000002412	R3HDM1	100	82.204	ENSOANG00000007987	R3HDM1	100	82.204	Ornithorhynchus_anatinus
ENSMPUG00000002412	R3HDM1	89	93.902	ENSOCUG00000017366	R3HDM1	98	93.801	Oryctolagus_cuniculus
ENSMPUG00000002412	R3HDM1	89	44.229	ENSORLG00000004297	r3hdm1	94	47.432	Oryzias_latipes
ENSMPUG00000002412	R3HDM1	89	45.969	ENSORLG00015017355	r3hdm1	99	46.634	Oryzias_latipes_hsok
ENSMPUG00000002412	R3HDM1	100	95.005	ENSOGAG00000003136	R3HDM1	100	95.005	Otolemur_garnettii
ENSMPUG00000002412	R3HDM1	100	95.822	ENSOARG00000010788	R3HDM1	100	95.822	Ovis_aries
ENSMPUG00000002412	R3HDM1	100	94.751	ENSPPAG00000027858	R3HDM1	100	94.480	Pan_paniscus
ENSMPUG00000002412	R3HDM1	100	98.183	ENSPPRG00000002626	R3HDM1	100	98.183	Panthera_pardus
ENSMPUG00000002412	R3HDM1	100	98.183	ENSPTIG00000016581	R3HDM1	100	98.183	Panthera_tigris_altaica
ENSMPUG00000002412	R3HDM1	100	94.661	ENSPTRG00000012494	R3HDM1	100	94.389	Pan_troglodytes
ENSMPUG00000002412	R3HDM1	100	94.832	ENSPANG00000026448	R3HDM1	100	94.651	Papio_anubis
ENSMPUG00000002412	R3HDM1	84	76.266	ENSPKIG00000004328	r3hdm1	91	76.508	Paramormyrops_kingsleyae
ENSMPUG00000002412	R3HDM1	100	78.804	ENSPSIG00000012915	R3HDM1	100	78.714	Pelodiscus_sinensis
ENSMPUG00000002412	R3HDM1	100	89.251	ENSPEMG00000015187	R3hdm1	100	91.362	Peromyscus_maniculatus_bairdii
ENSMPUG00000002412	R3HDM1	88	41.187	ENSPMAG00000003369	-	98	40.628	Petromyzon_marinus
ENSMPUG00000002412	R3HDM1	100	85.289	ENSPCIG00000002491	R3HDM1	100	85.199	Phascolarctos_cinereus
ENSMPUG00000002412	R3HDM1	89	46.568	ENSPFOG00000015036	r3hdm1	99	46.692	Poecilia_formosa
ENSMPUG00000002412	R3HDM1	80	49.894	ENSPLAG00000018042	r3hdm1	95	49.517	Poecilia_latipinna
ENSMPUG00000002412	R3HDM1	80	50.266	ENSPMEG00000023947	r3hdm1	95	50.322	Poecilia_mexicana
ENSMPUG00000002412	R3HDM1	89	48.604	ENSPREG00000007902	r3hdm1	88	62.233	Poecilia_reticulata
ENSMPUG00000002412	R3HDM1	100	93.931	ENSPPYG00000012815	R3HDM1	100	93.931	Pongo_abelii
ENSMPUG00000002412	R3HDM1	100	82.561	ENSPCAG00000006208	R3HDM1	100	82.198	Procavia_capensis
ENSMPUG00000002412	R3HDM1	100	92.398	ENSPCOG00000012698	R3HDM1	100	93.160	Propithecus_coquereli
ENSMPUG00000002412	R3HDM1	100	87.511	ENSPVAG00000006098	R3HDM1	100	87.421	Pteropus_vampyrus
ENSMPUG00000002412	R3HDM1	67	38.410	ENSPNAG00000004162	arpp21	52	48.889	Pygocentrus_nattereri
ENSMPUG00000002412	R3HDM1	93	63.551	ENSPNAG00000013952	r3hdm1	100	63.466	Pygocentrus_nattereri
ENSMPUG00000002412	R3HDM1	100	88.018	ENSRNOG00000004099	R3hdm1	100	87.566	Rattus_norvegicus
ENSMPUG00000002412	R3HDM1	100	93.937	ENSRBIG00000033317	R3HDM1	100	98.893	Rhinopithecus_bieti
ENSMPUG00000002412	R3HDM1	100	94.565	ENSRROG00000034534	R3HDM1	100	94.384	Rhinopithecus_roxellana
ENSMPUG00000002412	R3HDM1	100	94.832	ENSSBOG00000020389	R3HDM1	100	94.832	Saimiri_boliviensis_boliviensis
ENSMPUG00000002412	R3HDM1	100	85.585	ENSSHAG00000016999	R3HDM1	100	85.494	Sarcophilus_harrisii
ENSMPUG00000002412	R3HDM1	100	56.584	ENSSFOG00015019851	-	99	57.357	Scleropages_formosus
ENSMPUG00000002412	R3HDM1	93	70.944	ENSSFOG00015014134	r3hdm1	100	70.874	Scleropages_formosus
ENSMPUG00000002412	R3HDM1	99	45.150	ENSSMAG00000001669	r3hdm1	99	44.905	Scophthalmus_maximus
ENSMPUG00000002412	R3HDM1	89	47.669	ENSSDUG00000010749	r3hdm1	99	47.992	Seriola_dumerili
ENSMPUG00000002412	R3HDM1	99	47.491	ENSSLDG00000004499	r3hdm1	99	47.524	Seriola_lalandi_dorsalis
ENSMPUG00000002412	R3HDM1	64	95.798	ENSSARG00000000352	-	64	95.798	Sorex_araneus
ENSMPUG00000002412	R3HDM1	100	80.543	ENSSPUG00000004167	R3HDM1	100	80.271	Sphenodon_punctatus
ENSMPUG00000002412	R3HDM1	89	49.714	ENSSPAG00000004648	r3hdm1	99	49.408	Stegastes_partitus
ENSMPUG00000002412	R3HDM1	100	97.366	ENSSSCG00000015692	R3HDM1	100	97.366	Sus_scrofa
ENSMPUG00000002412	R3HDM1	100	73.736	ENSTGUG00000011750	R3HDM1	100	73.827	Taeniopygia_guttata
ENSMPUG00000002412	R3HDM1	79	47.532	ENSTRUG00000011654	r3hdm1	93	47.249	Takifugu_rubripes
ENSMPUG00000002412	R3HDM1	83	47.225	ENSTNIG00000010362	r3hdm1	94	47.290	Tetraodon_nigroviridis
ENSMPUG00000002412	R3HDM1	100	89.373	ENSTTRG00000003935	R3HDM1	100	89.373	Tursiops_truncatus
ENSMPUG00000002412	R3HDM1	70	98.710	ENSUAMG00000024806	R3HDM1	99	97.048	Ursus_americanus
ENSMPUG00000002412	R3HDM1	100	94.005	ENSUMAG00000005552	R3HDM1	100	96.242	Ursus_maritimus
ENSMPUG00000002412	R3HDM1	93	100.000	ENSVPAG00000007333	R3HDM1	93	100.000	Vicugna_pacos
ENSMPUG00000002412	R3HDM1	100	95.771	ENSVVUG00000006457	R3HDM1	100	95.771	Vulpes_vulpes
ENSMPUG00000002412	R3HDM1	89	67.339	ENSXETG00000019330	r3hdm1	100	67.137	Xenopus_tropicalis
ENSMPUG00000002412	R3HDM1	67	50.897	ENSXCOG00000017448	r3hdm1	94	50.064	Xiphophorus_couchianus
ENSMPUG00000002412	R3HDM1	89	46.729	ENSXMAG00000007885	r3hdm1	99	45.744	Xiphophorus_maculatus