EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMPUG00000003556 (Gene tree)
Gene ID: 101676986
Gene Symbol: TRUB1
Alias: PUS4
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Mustela_putorius_furo
Status: putative
Strand: Minus strand
Length: 44840 bases
Position: chrGL896929.1:14648913-14693752
Accession: 101676986
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMPUP00000003526	TruB_N	PF01509.18	2.1e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMPUT00000003593	TRUB1-201	5557	-	ENSMPUP00000003526	350 (aa)	XP_004751926	M3XWS6

Gene Model

Click here to download ENSMPUG00000003556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMPUG00000003556's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMPUG00000003556	TRUB1	99	93.983	ENSG00000165832	TRUB1	96	94.345	Homo_sapiens
ENSMPUG00000003556	TRUB1	70	68.980	ENSAPOG00000020565	trub1	89	68.699	Acanthochromis_polyacanthus
ENSMPUG00000003556	TRUB1	100	96.307	ENSAMEG00000014931	TRUB1	100	96.307	Ailuropoda_melanoleuca
ENSMPUG00000003556	TRUB1	70	63.415	ENSACIG00000003060	trub1	82	63.415	Amphilophus_citrinellus
ENSMPUG00000003556	TRUB1	70	68.980	ENSAOCG00000017188	trub1	89	68.699	Amphiprion_ocellaris
ENSMPUG00000003556	TRUB1	70	68.293	ENSAPEG00000015209	trub1	89	68.293	Amphiprion_percula
ENSMPUG00000003556	TRUB1	69	69.295	ENSATEG00000023291	trub1	86	69.295	Anabas_testudineus
ENSMPUG00000003556	TRUB1	79	76.364	ENSAPLG00000006808	TRUB1	99	76.364	Anas_platyrhynchos
ENSMPUG00000003556	TRUB1	77	71.747	ENSACAG00000009282	TRUB1	97	71.747	Anolis_carolinensis
ENSMPUG00000003556	TRUB1	95	96.108	ENSANAG00000022870	TRUB1	95	96.119	Aotus_nancymaae
ENSMPUG00000003556	TRUB1	72	67.460	ENSACLG00000000823	trub1	91	67.460	Astatotilapia_calliptera
ENSMPUG00000003556	TRUB1	77	65.926	ENSAMXG00000015845	trub1	90	65.926	Astyanax_mexicanus
ENSMPUG00000003556	TRUB1	98	94.152	ENSBTAG00000012955	TRUB1	95	94.643	Bos_taurus
ENSMPUG00000003556	TRUB1	99	95.143	ENSCJAG00000047815	TRUB1	96	95.833	Callithrix_jacchus
ENSMPUG00000003556	TRUB1	99	97.135	ENSCAFG00000011688	TRUB1	99	97.135	Canis_familiaris
ENSMPUG00000003556	TRUB1	99	97.421	ENSCAFG00020013237	TRUB1	99	97.421	Canis_lupus_dingo
ENSMPUG00000003556	TRUB1	98	94.152	ENSCHIG00000020884	TRUB1	94	95.770	Capra_hircus
ENSMPUG00000003556	TRUB1	99	92.571	ENSTSYG00000000446	TRUB1	86	96.346	Carlito_syrichta
ENSMPUG00000003556	TRUB1	72	85.771	ENSCAPG00000017088	TRUB1	99	85.771	Cavia_aperea
ENSMPUG00000003556	TRUB1	71	80.645	ENSCPOG00000030129	-	76	93.846	Cavia_porcellus
ENSMPUG00000003556	TRUB1	70	86.122	ENSCPOG00000040236	-	81	93.909	Cavia_porcellus
ENSMPUG00000003556	TRUB1	96	95.238	ENSCCAG00000028842	TRUB1	96	95.238	Cebus_capucinus
ENSMPUG00000003556	TRUB1	99	94.842	ENSCATG00000033431	TRUB1	86	97.674	Cercocebus_atys
ENSMPUG00000003556	TRUB1	70	89.388	ENSCLAG00000008664	TRUB1	95	90.517	Chinchilla_lanigera
ENSMPUG00000003556	TRUB1	99	95.129	ENSCSAG00000004891	TRUB1	86	98.007	Chlorocebus_sabaeus
ENSMPUG00000003556	TRUB1	99	79.480	ENSCHOG00000011931	TRUB1	95	79.880	Choloepus_hoffmanni
ENSMPUG00000003556	TRUB1	78	80.147	ENSCPBG00000003051	TRUB1	94	80.147	Chrysemys_picta_bellii
ENSMPUG00000003556	TRUB1	99	95.129	ENSCANG00000029445	TRUB1	86	98.007	Colobus_angolensis_palliatus
ENSMPUG00000003556	TRUB1	73	88.583	ENSCGRG00001016772	-	90	80.135	Cricetulus_griseus_chok1gshd
ENSMPUG00000003556	TRUB1	80	80.714	ENSCGRG00001010322	-	79	80.612	Cricetulus_griseus_chok1gshd
ENSMPUG00000003556	TRUB1	80	89.643	ENSCGRG00000010806	Trub1	91	88.889	Cricetulus_griseus_crigri
ENSMPUG00000003556	TRUB1	73	62.891	ENSCSEG00000011261	trub1	98	57.285	Cynoglossus_semilaevis
ENSMPUG00000003556	TRUB1	70	68.571	ENSCVAG00000008791	trub1	78	67.059	Cyprinodon_variegatus
ENSMPUG00000003556	TRUB1	80	64.643	ENSDARG00000053805	trub1	93	64.643	Danio_rerio
ENSMPUG00000003556	TRUB1	97	88.235	ENSDNOG00000001069	TRUB1	95	88.657	Dasypus_novemcinctus
ENSMPUG00000003556	TRUB1	99	89.398	ENSDORG00000010431	Trub1	87	95.681	Dipodomys_ordii
ENSMPUG00000003556	TRUB1	81	78.922	ENSETEG00000009183	TRUB1	66	87.248	Echinops_telfairi
ENSMPUG00000003556	TRUB1	96	95.536	ENSEASG00005014739	TRUB1	96	95.536	Equus_asinus_asinus
ENSMPUG00000003556	TRUB1	96	95.536	ENSECAG00000007177	TRUB1	96	95.536	Equus_caballus
ENSMPUG00000003556	TRUB1	99	77.095	ENSEEUG00000013993	TRUB1	96	78.779	Erinaceus_europaeus
ENSMPUG00000003556	TRUB1	70	70.204	ENSELUG00000000502	trub1	86	70.204	Esox_lucius
ENSMPUG00000003556	TRUB1	96	95.252	ENSFCAG00000031927	TRUB1	97	95.252	Felis_catus
ENSMPUG00000003556	TRUB1	69	77.083	ENSFALG00000002232	TRUB1	92	77.083	Ficedula_albicollis
ENSMPUG00000003556	TRUB1	70	87.755	ENSFDAG00000008140	TRUB1	95	90.086	Fukomys_damarensis
ENSMPUG00000003556	TRUB1	70	66.939	ENSFHEG00000004016	trub1	84	66.939	Fundulus_heteroclitus
ENSMPUG00000003556	TRUB1	78	75.000	ENSGALG00000009091	TRUB1	97	74.057	Gallus_gallus
ENSMPUG00000003556	TRUB1	68	65.417	ENSGAFG00000009193	trub1	86	64.754	Gambusia_affinis
ENSMPUG00000003556	TRUB1	56	68.718	ENSGACG00000015387	trub1	96	68.718	Gasterosteus_aculeatus
ENSMPUG00000003556	TRUB1	88	74.110	ENSGAGG00000009758	TRUB1	81	78.873	Gopherus_agassizii
ENSMPUG00000003556	TRUB1	99	94.556	ENSGGOG00000004583	TRUB1	96	94.940	Gorilla_gorilla
ENSMPUG00000003556	TRUB1	72	67.460	ENSHBUG00000016787	trub1	91	67.460	Haplochromis_burtoni
ENSMPUG00000003556	TRUB1	99	87.679	ENSHGLG00000015314	TRUB1	96	88.690	Heterocephalus_glaber_female
ENSMPUG00000003556	TRUB1	70	87.347	ENSHGLG00100009183	TRUB1	83	95.431	Heterocephalus_glaber_male
ENSMPUG00000003556	TRUB1	70	68.571	ENSHCOG00000017877	trub1	89	68.571	Hippocampus_comes
ENSMPUG00000003556	TRUB1	79	66.304	ENSIPUG00000017559	trub1	97	66.304	Ictalurus_punctatus
ENSMPUG00000003556	TRUB1	90	94.268	ENSSTOG00000003641	TRUB1	90	95.349	Ictidomys_tridecemlineatus
ENSMPUG00000003556	TRUB1	99	84.241	ENSJJAG00000011800	Trub1	88	91.639	Jaculus_jaculus
ENSMPUG00000003556	TRUB1	72	66.148	ENSKMAG00000006232	trub1	92	66.148	Kryptolebias_marmoratus
ENSMPUG00000003556	TRUB1	76	64.286	ENSLBEG00000026722	trub1	92	64.286	Labrus_bergylta
ENSMPUG00000003556	TRUB1	79	73.913	ENSLACG00000014885	TRUB1	92	73.913	Latimeria_chalumnae
ENSMPUG00000003556	TRUB1	78	71.062	ENSLOCG00000012979	trub1	93	71.062	Lepisosteus_oculatus
ENSMPUG00000003556	TRUB1	99	80.112	ENSLAFG00000015452	TRUB1	86	85.667	Loxodonta_africana
ENSMPUG00000003556	TRUB1	99	94.842	ENSMFAG00000031767	TRUB1	86	97.674	Macaca_fascicularis
ENSMPUG00000003556	TRUB1	99	95.129	ENSMMUG00000001902	TRUB1	86	98.007	Macaca_mulatta
ENSMPUG00000003556	TRUB1	99	90.831	ENSMNEG00000044646	TRUB1	86	93.023	Macaca_nemestrina
ENSMPUG00000003556	TRUB1	99	94.842	ENSMLEG00000042655	TRUB1	86	98.007	Mandrillus_leucophaeus
ENSMPUG00000003556	TRUB1	72	67.460	ENSMZEG00005024095	trub1	91	67.460	Maylandia_zebra
ENSMPUG00000003556	TRUB1	78	74.265	ENSMGAG00000011135	TRUB1	93	74.265	Meleagris_gallopavo
ENSMPUG00000003556	TRUB1	85	85.906	ENSMAUG00000011101	Trub1	89	86.000	Mesocricetus_auratus
ENSMPUG00000003556	TRUB1	99	94.842	ENSMICG00000016324	TRUB1	96	95.238	Microcebus_murinus
ENSMPUG00000003556	TRUB1	91	84.000	ENSMOCG00000017759	Trub1	91	88.040	Microtus_ochrogaster
ENSMPUG00000003556	TRUB1	82	84.669	ENSMODG00000009676	TRUB1	82	82.828	Monodelphis_domestica
ENSMPUG00000003556	TRUB1	99	81.662	MGP_CAROLIEiJ_G0023100	Trub1	89	87.375	Mus_caroli
ENSMPUG00000003556	TRUB1	99	80.516	ENSMUSG00000025086	Trub1	89	86.379	Mus_musculus
ENSMPUG00000003556	TRUB1	99	82.521	MGP_PahariEiJ_G0014588	Trub1	89	87.708	Mus_pahari
ENSMPUG00000003556	TRUB1	99	80.802	MGP_SPRETEiJ_G0024021	Trub1	89	86.711	Mus_spretus
ENSMPUG00000003556	TRUB1	95	91.018	ENSMLUG00000017686	TRUB1	96	89.286	Myotis_lucifugus
ENSMPUG00000003556	TRUB1	99	86.246	ENSNGAG00000018682	Trub1	86	92.027	Nannospalax_galili
ENSMPUG00000003556	TRUB1	70	68.699	ENSNBRG00000023393	trub1	88	68.699	Neolamprologus_brichardi
ENSMPUG00000003556	TRUB1	96	94.643	ENSNLEG00000016345	TRUB1	86	97.342	Nomascus_leucogenys
ENSMPUG00000003556	TRUB1	57	91.542	ENSMEUG00000006603	TRUB1	78	88.626	Notamacropus_eugenii
ENSMPUG00000003556	TRUB1	86	87.043	ENSOPRG00000009371	TRUB1	88	87.043	Ochotona_princeps
ENSMPUG00000003556	TRUB1	99	85.100	ENSODEG00000010854	TRUB1	96	86.012	Octodon_degus
ENSMPUG00000003556	TRUB1	70	68.293	ENSONIG00000007249	trub1	89	68.293	Oreochromis_niloticus
ENSMPUG00000003556	TRUB1	78	81.387	ENSOANG00000001556	TRUB1	93	79.152	Ornithorhynchus_anatinus
ENSMPUG00000003556	TRUB1	99	85.100	ENSOCUG00000009456	TRUB1	96	87.988	Oryctolagus_cuniculus
ENSMPUG00000003556	TRUB1	69	69.710	ENSORLG00000029719	trub1	86	69.710	Oryzias_latipes
ENSMPUG00000003556	TRUB1	69	69.295	ENSORLG00020016767	trub1	85	69.295	Oryzias_latipes_hni
ENSMPUG00000003556	TRUB1	69	69.295	ENSORLG00015014728	trub1	86	69.295	Oryzias_latipes_hsok
ENSMPUG00000003556	TRUB1	74	66.795	ENSOMEG00000014556	trub1	90	66.926	Oryzias_melastigma
ENSMPUG00000003556	TRUB1	99	94.269	ENSOGAG00000015895	TRUB1	96	95.833	Otolemur_garnettii
ENSMPUG00000003556	TRUB1	84	94.702	ENSOARG00000015591	TRUB1	87	94.444	Ovis_aries
ENSMPUG00000003556	TRUB1	99	94.556	ENSPPAG00000043645	TRUB1	96	94.940	Pan_paniscus
ENSMPUG00000003556	TRUB1	96	94.659	ENSPPRG00000007096	TRUB1	97	94.659	Panthera_pardus
ENSMPUG00000003556	TRUB1	96	94.955	ENSPTIG00000006378	TRUB1	97	94.955	Panthera_tigris_altaica
ENSMPUG00000003556	TRUB1	99	94.556	ENSPTRG00000002964	TRUB1	96	94.940	Pan_troglodytes
ENSMPUG00000003556	TRUB1	99	95.129	ENSPANG00000020712	TRUB1	86	98.007	Papio_anubis
ENSMPUG00000003556	TRUB1	78	77.574	ENSPSIG00000012877	TRUB1	93	77.574	Pelodiscus_sinensis
ENSMPUG00000003556	TRUB1	70	65.714	ENSPMGG00000000075	trub1	88	65.714	Periophthalmus_magnuspinnatus
ENSMPUG00000003556	TRUB1	86	86.333	ENSPEMG00000011156	Trub1	88	86.333	Peromyscus_maniculatus_bairdii
ENSMPUG00000003556	TRUB1	82	83.972	ENSPCIG00000009729	TRUB1	80	82.935	Phascolarctos_cinereus
ENSMPUG00000003556	TRUB1	70	66.531	ENSPFOG00000009950	trub1	90	66.531	Poecilia_formosa
ENSMPUG00000003556	TRUB1	70	66.531	ENSPLAG00000013855	trub1	86	66.531	Poecilia_latipinna
ENSMPUG00000003556	TRUB1	70	66.531	ENSPMEG00000009064	trub1	88	66.531	Poecilia_mexicana
ENSMPUG00000003556	TRUB1	70	67.347	ENSPREG00000003343	trub1	88	67.347	Poecilia_reticulata
ENSMPUG00000003556	TRUB1	96	94.345	ENSPPYG00000002676	TRUB1	96	94.345	Pongo_abelii
ENSMPUG00000003556	TRUB1	99	76.705	ENSPCAG00000008427	TRUB1	85	79.667	Procavia_capensis
ENSMPUG00000003556	TRUB1	99	89.398	ENSPCOG00000024360	TRUB1	85	92.027	Propithecus_coquereli
ENSMPUG00000003556	TRUB1	75	95.833	ENSPVAG00000007575	TRUB1	95	96.414	Pteropus_vampyrus
ENSMPUG00000003556	TRUB1	72	67.460	ENSPNYG00000018614	trub1	91	67.460	Pundamilia_nyererei
ENSMPUG00000003556	TRUB1	78	58.456	ENSPNAG00000006881	trub1	88	58.456	Pygocentrus_nattereri
ENSMPUG00000003556	TRUB1	99	82.235	ENSRNOG00000017321	Trub1	88	87.708	Rattus_norvegicus
ENSMPUG00000003556	TRUB1	99	84.814	ENSRBIG00000033423	TRUB1	85	86.711	Rhinopithecus_bieti
ENSMPUG00000003556	TRUB1	99	94.556	ENSRROG00000033902	TRUB1	86	98.007	Rhinopithecus_roxellana
ENSMPUG00000003556	TRUB1	96	95.536	ENSSBOG00000024237	TRUB1	86	97.674	Saimiri_boliviensis_boliviensis
ENSMPUG00000003556	TRUB1	73	82.879	ENSSHAG00000009346	TRUB1	86	82.879	Sarcophilus_harrisii
ENSMPUG00000003556	TRUB1	69	70.370	ENSSFOG00015022124	trub1	83	70.370	Scleropages_formosus
ENSMPUG00000003556	TRUB1	70	69.106	ENSSMAG00000001020	trub1	88	69.106	Scophthalmus_maximus
ENSMPUG00000003556	TRUB1	69	69.583	ENSSDUG00000016414	trub1	88	69.512	Seriola_dumerili
ENSMPUG00000003556	TRUB1	69	70.000	ENSSLDG00000015486	trub1	88	69.919	Seriola_lalandi_dorsalis
ENSMPUG00000003556	TRUB1	80	77.857	ENSSPUG00000001642	TRUB1	96	77.857	Sphenodon_punctatus
ENSMPUG00000003556	TRUB1	75	66.540	ENSSPAG00000001217	trub1	94	66.540	Stegastes_partitus
ENSMPUG00000003556	TRUB1	99	89.398	ENSSSCG00000010653	TRUB1	96	89.881	Sus_scrofa
ENSMPUG00000003556	TRUB1	77	76.667	ENSTGUG00000010971	TRUB1	97	76.471	Taeniopygia_guttata
ENSMPUG00000003556	TRUB1	73	77.953	ENSTBEG00000002880	TRUB1	100	77.953	Tupaia_belangeri
ENSMPUG00000003556	TRUB1	62	98.148	ENSTTRG00000005767	TRUB1	82	98.148	Tursiops_truncatus
ENSMPUG00000003556	TRUB1	100	98.000	ENSUAMG00000024876	TRUB1	100	98.000	Ursus_americanus
ENSMPUG00000003556	TRUB1	100	94.286	ENSUMAG00000002411	TRUB1	100	94.286	Ursus_maritimus
ENSMPUG00000003556	TRUB1	99	94.269	ENSVPAG00000005507	TRUB1	96	94.345	Vicugna_pacos
ENSMPUG00000003556	TRUB1	99	96.848	ENSVVUG00000010085	TRUB1	83	96.848	Vulpes_vulpes
ENSMPUG00000003556	TRUB1	78	66.912	ENSXETG00000023828	trub1	98	66.912	Xenopus_tropicalis
ENSMPUG00000003556	TRUB1	69	65.432	ENSXCOG00000017847	trub1	86	65.432	Xiphophorus_couchianus
ENSMPUG00000003556	TRUB1	70	65.714	ENSXMAG00000014701	trub1	88	65.714	Xiphophorus_maculatus