EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMPUG00000004546 (Gene tree)
Gene ID: 101681345
Gene Symbol: SMG5
Alias: EST1B|KIAA1089|LPTS-RP1|LPTSRP1|RP11-54H19.7|SMG-5
Full Name: SMG5%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Mustela_putorius_furo
Status: putative
Strand: Plus strand
Length: 19394 bases
Position: chrGL897177.1:787491-806884
Accession: 24644
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMPUP00000004510	EST1	PF10374.9	1.1e-23	1	1
ENSMPUP00000004510	EST1_DNA_bind	PF10373.9	1e-38	1	1
ENSMPUP00000004510	PIN_4	PF13638.6	1.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMPUT00000004589	SMG5-201	2863	-	ENSMPUP00000004510	945 (aa)	-	M3XZK9

Gene Model

Click here to download ENSMPUG00000004546's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMPUG00000004546's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMPUG00000004546	SMG5	100	92.526	ENSG00000198952	SMG5	94	92.947	Homo_sapiens
ENSMPUG00000004546	SMG5	100	65.579	ENSAPOG00000019690	smg5	87	75.890	Acanthochromis_polyacanthus
ENSMPUG00000004546	SMG5	100	94.532	ENSAMEG00000014458	SMG5	96	94.532	Ailuropoda_melanoleuca
ENSMPUG00000004546	SMG5	100	63.571	ENSACIG00000001353	smg5	94	65.057	Amphilophus_citrinellus
ENSMPUG00000004546	SMG5	93	74.468	ENSAOCG00000019483	smg5	89	64.984	Amphiprion_ocellaris
ENSMPUG00000004546	SMG5	93	74.734	ENSAPEG00000022949	smg5	94	64.651	Amphiprion_percula
ENSMPUG00000004546	SMG5	100	64.426	ENSATEG00000005348	smg5	94	65.428	Anabas_testudineus
ENSMPUG00000004546	SMG5	100	75.687	ENSAPLG00000010263	SMG5	96	75.788	Anas_platyrhynchos
ENSMPUG00000004546	SMG5	100	91.789	ENSANAG00000032899	SMG5	94	92.526	Aotus_nancymaae
ENSMPUG00000004546	SMG5	100	63.460	ENSACLG00000009311	smg5	93	64.330	Astatotilapia_calliptera
ENSMPUG00000004546	SMG5	54	59.410	ENSAMXG00000024616	smg5	94	61.278	Astyanax_mexicanus
ENSMPUG00000004546	SMG5	100	91.789	ENSBTAG00000009435	SMG5	94	93.053	Bos_taurus
ENSMPUG00000004546	SMG5	99	43.319	ENSBTAG00000021747	-	93	43.111	Bos_taurus
ENSMPUG00000004546	SMG5	100	92.105	ENSCJAG00000005684	SMG5	94	92.842	Callithrix_jacchus
ENSMPUG00000004546	SMG5	100	95.026	ENSCAFG00000016839	SMG5	93	95.026	Canis_familiaris
ENSMPUG00000004546	SMG5	100	95.026	ENSCAFG00020006061	SMG5	93	95.026	Canis_lupus_dingo
ENSMPUG00000004546	SMG5	99	43.928	ENSCHIG00000006323	-	94	43.823	Capra_hircus
ENSMPUG00000004546	SMG5	100	92.842	ENSCHIG00000007709	SMG5	94	92.842	Capra_hircus
ENSMPUG00000004546	SMG5	100	92.744	ENSTSYG00000004099	SMG5	94	92.744	Carlito_syrichta
ENSMPUG00000004546	SMG5	100	72.059	ENSCAPG00000003631	SMG5	99	72.147	Cavia_aperea
ENSMPUG00000004546	SMG5	100	91.387	ENSCPOG00000015696	SMG5	94	91.702	Cavia_porcellus
ENSMPUG00000004546	SMG5	100	92.105	ENSCCAG00000027409	SMG5	94	92.842	Cebus_capucinus
ENSMPUG00000004546	SMG5	100	92.316	ENSCATG00000030539	SMG5	94	92.947	Cercocebus_atys
ENSMPUG00000004546	SMG5	100	92.227	ENSCLAG00000003983	SMG5	94	92.752	Chinchilla_lanigera
ENSMPUG00000004546	SMG5	100	92.211	ENSCSAG00000002120	SMG5	94	92.842	Chlorocebus_sabaeus
ENSMPUG00000004546	SMG5	54	87.956	ENSCHOG00000008741	-	52	87.956	Choloepus_hoffmanni
ENSMPUG00000004546	SMG5	100	74.544	ENSCPBG00000025848	SMG5	100	76.065	Chrysemys_picta_bellii
ENSMPUG00000004546	SMG5	94	34.168	ENSCING00000008706	-	93	34.528	Ciona_intestinalis
ENSMPUG00000004546	SMG5	100	88.316	ENSCANG00000029208	SMG5	93	89.158	Colobus_angolensis_palliatus
ENSMPUG00000004546	SMG5	100	88.749	ENSCGRG00001006336	Smg5	94	88.328	Cricetulus_griseus_chok1gshd
ENSMPUG00000004546	SMG5	100	88.749	ENSCGRG00000005111	Smg5	96	88.328	Cricetulus_griseus_crigri
ENSMPUG00000004546	SMG5	92	75.833	ENSCSEG00000014220	smg5	93	63.836	Cynoglossus_semilaevis
ENSMPUG00000004546	SMG5	100	58.498	ENSCVAG00000000529	smg5	93	59.417	Cyprinodon_variegatus
ENSMPUG00000004546	SMG5	93	78.592	ENSDARG00000041481	smg5	94	60.383	Danio_rerio
ENSMPUG00000004546	SMG5	96	36.848	ENSDNOG00000039862	-	97	35.173	Dasypus_novemcinctus
ENSMPUG00000004546	SMG5	100	88.421	ENSDNOG00000000051	SMG5	93	88.936	Dasypus_novemcinctus
ENSMPUG00000004546	SMG5	100	90.346	ENSDORG00000010382	Smg5	94	90.221	Dipodomys_ordii
ENSMPUG00000004546	SMG5	67	36.129	FBgn0019890	Smg5	58	36.129	Drosophila_melanogaster
ENSMPUG00000004546	SMG5	81	96.117	ENSETEG00000010336	SMG5	84	96.117	Echinops_telfairi
ENSMPUG00000004546	SMG5	92	46.704	ENSEBUG00000003739	smg5	93	46.300	Eptatretus_burgeri
ENSMPUG00000004546	SMG5	100	93.158	ENSEASG00005019122	SMG5	94	93.158	Equus_asinus_asinus
ENSMPUG00000004546	SMG5	100	93.158	ENSECAG00000001389	SMG5	94	93.158	Equus_caballus
ENSMPUG00000004546	SMG5	73	94.771	ENSEEUG00000012690	SMG5	69	94.771	Erinaceus_europaeus
ENSMPUG00000004546	SMG5	100	64.249	ENSELUG00000012585	smg5	93	64.663	Esox_lucius
ENSMPUG00000004546	SMG5	100	95.455	ENSFCAG00000011783	SMG5	93	95.455	Felis_catus
ENSMPUG00000004546	SMG5	58	78.995	ENSFALG00000001166	-	99	75.862	Ficedula_albicollis
ENSMPUG00000004546	SMG5	100	90.431	ENSFDAG00000017388	SMG5	96	90.326	Fukomys_damarensis
ENSMPUG00000004546	SMG5	100	62.044	ENSFHEG00000013939	smg5	91	68.284	Fundulus_heteroclitus
ENSMPUG00000004546	SMG5	100	60.000	ENSGMOG00000007310	smg5	87	75.538	Gadus_morhua
ENSMPUG00000004546	SMG5	100	74.671	ENSGALG00000029918	-	94	74.367	Gallus_gallus
ENSMPUG00000004546	SMG5	85	73.475	ENSGAFG00000021691	smg5	90	65.815	Gambusia_affinis
ENSMPUG00000004546	SMG5	100	75.963	ENSGAGG00000016131	SMG5	94	76.369	Gopherus_agassizii
ENSMPUG00000004546	SMG5	100	92.105	ENSGGOG00000010932	SMG5	94	92.842	Gorilla_gorilla
ENSMPUG00000004546	SMG5	100	63.367	ENSHBUG00000008654	smg5	94	63.544	Haplochromis_burtoni
ENSMPUG00000004546	SMG5	100	89.286	ENSHGLG00000019152	SMG5	94	90.336	Heterocephalus_glaber_female
ENSMPUG00000004546	SMG5	90	89.215	ENSHGLG00100015948	SMG5	93	90.387	Heterocephalus_glaber_male
ENSMPUG00000004546	SMG5	87	72.958	ENSHCOG00000010229	smg5	78	72.958	Hippocampus_comes
ENSMPUG00000004546	SMG5	100	60.000	ENSIPUG00000006624	Smg5	94	60.832	Ictalurus_punctatus
ENSMPUG00000004546	SMG5	100	92.632	ENSSTOG00000001780	SMG5	94	92.947	Ictidomys_tridecemlineatus
ENSMPUG00000004546	SMG5	100	88.982	ENSJJAG00000022763	Smg5	94	88.562	Jaculus_jaculus
ENSMPUG00000004546	SMG5	54	58.242	ENSKMAG00000014586	smg5	94	59.284	Kryptolebias_marmoratus
ENSMPUG00000004546	SMG5	100	64.330	ENSLBEG00000002145	smg5	93	64.041	Labrus_bergylta
ENSMPUG00000004546	SMG5	100	63.516	ENSLACG00000010521	SMG5	94	63.415	Latimeria_chalumnae
ENSMPUG00000004546	SMG5	96	77.198	ENSLOCG00000008380	smg5	92	60.140	Lepisosteus_oculatus
ENSMPUG00000004546	SMG5	100	91.579	ENSLAFG00000006241	SMG5	94	92.632	Loxodonta_africana
ENSMPUG00000004546	SMG5	100	92.211	ENSMFAG00000045357	SMG5	94	92.842	Macaca_fascicularis
ENSMPUG00000004546	SMG5	100	92.211	ENSMMUG00000000090	SMG5	94	92.842	Macaca_mulatta
ENSMPUG00000004546	SMG5	100	92.105	ENSMNEG00000044425	SMG5	94	92.737	Macaca_nemestrina
ENSMPUG00000004546	SMG5	99	87.831	ENSMLEG00000041192	SMG5	95	88.466	Mandrillus_leucophaeus
ENSMPUG00000004546	SMG5	100	58.790	ENSMAMG00000010683	smg5	92	77.222	Mastacembelus_armatus
ENSMPUG00000004546	SMG5	67	57.640	ENSMZEG00005016543	smg5	100	58.359	Maylandia_zebra
ENSMPUG00000004546	SMG5	100	61.523	ENSMZEG00005015815	smg5	93	62.705	Maylandia_zebra
ENSMPUG00000004546	SMG5	54	43.182	ENSMAUG00000000043	-	88	43.667	Mesocricetus_auratus
ENSMPUG00000004546	SMG5	100	88.223	ENSMAUG00000010381	Smg5	94	87.802	Mesocricetus_auratus
ENSMPUG00000004546	SMG5	100	92.105	ENSMICG00000002257	SMG5	93	92.842	Microcebus_murinus
ENSMPUG00000004546	SMG5	100	87.723	ENSMOCG00000016590	Smg5	94	87.513	Microtus_ochrogaster
ENSMPUG00000004546	SMG5	100	56.654	ENSMMOG00000017199	smg5	94	58.286	Mola_mola
ENSMPUG00000004546	SMG5	86	85.401	ENSMODG00000016901	SMG5	91	86.740	Monodelphis_domestica
ENSMPUG00000004546	SMG5	79	38.416	ENSMODG00000004532	-	77	38.416	Monodelphis_domestica
ENSMPUG00000004546	SMG5	78	37.783	ENSMODG00000010675	-	79	37.931	Monodelphis_domestica
ENSMPUG00000004546	SMG5	77	39.633	ENSMODG00000004735	-	82	39.733	Monodelphis_domestica
ENSMPUG00000004546	SMG5	100	57.750	ENSMALG00000010375	smg5	94	57.318	Monopterus_albus
ENSMPUG00000004546	SMG5	100	88.538	MGP_CAROLIEiJ_G0025163	Smg5	96	96.491	Mus_caroli
ENSMPUG00000004546	SMG5	100	88.854	ENSMUSG00000001415	Smg5	95	96.491	Mus_musculus
ENSMPUG00000004546	SMG5	100	88.353	MGP_PahariEiJ_G0026606	Smg5	96	96.491	Mus_pahari
ENSMPUG00000004546	SMG5	100	88.749	MGP_SPRETEiJ_G0026104	Smg5	96	96.491	Mus_spretus
ENSMPUG00000004546	SMG5	100	91.597	ENSMLUG00000008518	SMG5	94	90.861	Myotis_lucifugus
ENSMPUG00000004546	SMG5	100	89.590	ENSNGAG00000020706	Smg5	94	90.116	Nannospalax_galili
ENSMPUG00000004546	SMG5	100	43.277	ENSNGAG00000012101	-	93	43.809	Nannospalax_galili
ENSMPUG00000004546	SMG5	97	61.736	ENSNBRG00000004332	smg5	91	63.011	Neolamprologus_brichardi
ENSMPUG00000004546	SMG5	100	91.895	ENSNLEG00000012439	SMG5	94	92.632	Nomascus_leucogenys
ENSMPUG00000004546	SMG5	100	84.017	ENSMEUG00000012834	SMG5	94	83.912	Notamacropus_eugenii
ENSMPUG00000004546	SMG5	100	90.316	ENSOPRG00000009152	SMG5	94	90.632	Ochotona_princeps
ENSMPUG00000004546	SMG5	100	90.947	ENSODEG00000012237	SMG5	93	91.684	Octodon_degus
ENSMPUG00000004546	SMG5	100	58.255	ENSONIG00000008632	smg5	87	76.731	Oreochromis_niloticus
ENSMPUG00000004546	SMG5	100	91.895	ENSOCUG00000012886	SMG5	96	92.526	Oryctolagus_cuniculus
ENSMPUG00000004546	SMG5	90	41.121	ENSOCUG00000023338	-	92	40.771	Oryctolagus_cuniculus
ENSMPUG00000004546	SMG5	54	58.379	ENSORLG00000016239	smg5	94	60.229	Oryzias_latipes
ENSMPUG00000004546	SMG5	100	63.816	ENSORLG00020013127	smg5	93	64.442	Oryzias_latipes_hni
ENSMPUG00000004546	SMG5	100	63.617	ENSORLG00015019014	smg5	93	64.345	Oryzias_latipes_hsok
ENSMPUG00000004546	SMG5	100	92.000	ENSOGAG00000004966	SMG5	94	92.632	Otolemur_garnettii
ENSMPUG00000004546	SMG5	100	92.947	ENSOARG00000005778	SMG5	94	92.947	Ovis_aries
ENSMPUG00000004546	SMG5	99	43.750	ENSOARG00000011963	-	94	43.483	Ovis_aries
ENSMPUG00000004546	SMG5	100	92.000	ENSPPAG00000011996	SMG5	94	92.737	Pan_paniscus
ENSMPUG00000004546	SMG5	100	95.450	ENSPPRG00000011901	SMG5	96	95.450	Panthera_pardus
ENSMPUG00000004546	SMG5	99	88.021	ENSPTIG00000007892	SMG5	92	88.659	Panthera_tigris_altaica
ENSMPUG00000004546	SMG5	100	92.211	ENSPTRG00000023925	SMG5	94	92.947	Pan_troglodytes
ENSMPUG00000004546	SMG5	100	92.211	ENSPTRG00000049282	-	94	92.947	Pan_troglodytes
ENSMPUG00000004546	SMG5	100	92.316	ENSPANG00000011201	SMG5	94	92.947	Papio_anubis
ENSMPUG00000004546	SMG5	100	64.724	ENSPKIG00000009402	smg5	93	65.308	Paramormyrops_kingsleyae
ENSMPUG00000004546	SMG5	100	77.306	ENSPSIG00000015198	SMG5	96	77.090	Pelodiscus_sinensis
ENSMPUG00000004546	SMG5	100	59.274	ENSPMGG00000010465	smg5	94	57.910	Periophthalmus_magnuspinnatus
ENSMPUG00000004546	SMG5	100	88.854	ENSPEMG00000001819	Smg5	94	88.433	Peromyscus_maniculatus_bairdii
ENSMPUG00000004546	SMG5	55	46.065	ENSPEMG00000010022	-	87	44.090	Peromyscus_maniculatus_bairdii
ENSMPUG00000004546	SMG5	100	49.082	ENSPMAG00000000410	smg5	94	49.142	Petromyzon_marinus
ENSMPUG00000004546	SMG5	100	85.819	ENSPCIG00000018938	SMG5	94	84.874	Phascolarctos_cinereus
ENSMPUG00000004546	SMG5	93	73.740	ENSPFOG00000010191	smg5	94	60.436	Poecilia_formosa
ENSMPUG00000004546	SMG5	93	73.740	ENSPLAG00000009332	smg5	94	60.247	Poecilia_latipinna
ENSMPUG00000004546	SMG5	93	73.740	ENSPMEG00000014105	smg5	94	64.424	Poecilia_mexicana
ENSMPUG00000004546	SMG5	93	73.740	ENSPREG00000017713	smg5	94	60.114	Poecilia_reticulata
ENSMPUG00000004546	SMG5	100	92.316	ENSPPYG00000000723	SMG5	94	93.053	Pongo_abelii
ENSMPUG00000004546	SMG5	74	97.076	ENSPCAG00000008412	SMG5	74	97.076	Procavia_capensis
ENSMPUG00000004546	SMG5	100	92.211	ENSPCOG00000004741	SMG5	94	92.947	Propithecus_coquereli
ENSMPUG00000004546	SMG5	100	84.000	ENSPVAG00000016748	SMG5	94	84.000	Pteropus_vampyrus
ENSMPUG00000004546	SMG5	100	57.528	ENSPNYG00000013397	smg5	97	57.598	Pundamilia_nyererei
ENSMPUG00000004546	SMG5	100	60.769	ENSPNAG00000028363	smg5	94	60.853	Pygocentrus_nattereri
ENSMPUG00000004546	SMG5	100	89.169	ENSRNOG00000019590	Smg5	94	88.959	Rattus_norvegicus
ENSMPUG00000004546	SMG5	100	92.316	ENSRBIG00000027428	SMG5	94	92.947	Rhinopithecus_bieti
ENSMPUG00000004546	SMG5	100	92.211	ENSRROG00000030035	SMG5	94	92.842	Rhinopithecus_roxellana
ENSMPUG00000004546	SMG5	100	92.105	ENSSBOG00000033339	SMG5	94	92.842	Saimiri_boliviensis_boliviensis
ENSMPUG00000004546	SMG5	87	39.633	ENSSHAG00000000561	-	81	40.169	Sarcophilus_harrisii
ENSMPUG00000004546	SMG5	100	34.062	ENSSHAG00000009572	-	72	44.838	Sarcophilus_harrisii
ENSMPUG00000004546	SMG5	100	84.744	ENSSHAG00000014163	SMG5	96	85.893	Sarcophilus_harrisii
ENSMPUG00000004546	SMG5	63	40.120	ENSSHAG00000000935	-	73	40.994	Sarcophilus_harrisii
ENSMPUG00000004546	SMG5	96	75.833	ENSSFOG00015024175	smg5	93	64.865	Scleropages_formosus
ENSMPUG00000004546	SMG5	93	74.731	ENSSMAG00000013059	smg5	87	76.731	Scophthalmus_maximus
ENSMPUG00000004546	SMG5	100	57.717	ENSSDUG00000007122	smg5	94	59.775	Seriola_dumerili
ENSMPUG00000004546	SMG5	97	62.751	ENSSLDG00000011418	smg5	93	63.685	Seriola_lalandi_dorsalis
ENSMPUG00000004546	SMG5	90	78.026	ENSSARG00000012484	SMG5	93	78.026	Sorex_araneus
ENSMPUG00000004546	SMG5	100	75.076	ENSSPUG00000002260	SMG5	100	74.569	Sphenodon_punctatus
ENSMPUG00000004546	SMG5	100	64.499	ENSSPAG00000014266	smg5	93	64.153	Stegastes_partitus
ENSMPUG00000004546	SMG5	100	93.895	ENSSSCG00000006490	-	100	93.895	Sus_scrofa
ENSMPUG00000004546	SMG5	100	72.593	ENSSSCG00000039308	-	94	72.804	Sus_scrofa
ENSMPUG00000004546	SMG5	100	77.116	ENSTGUG00000003748	-	93	77.116	Taeniopygia_guttata
ENSMPUG00000004546	SMG5	100	61.837	ENSTRUG00000012580	smg5	87	74.387	Takifugu_rubripes
ENSMPUG00000004546	SMG5	100	63.223	ENSTNIG00000010303	smg5	87	73.118	Tetraodon_nigroviridis
ENSMPUG00000004546	SMG5	62	98.522	ENSTBEG00000002777	SMG5	57	98.522	Tupaia_belangeri
ENSMPUG00000004546	SMG5	100	91.368	ENSTTRG00000001401	SMG5	93	91.368	Tursiops_truncatus
ENSMPUG00000004546	SMG5	100	95.556	ENSUAMG00000013721	SMG5	93	95.556	Ursus_americanus
ENSMPUG00000004546	SMG5	100	90.295	ENSUMAG00000018041	SMG5	93	90.295	Ursus_maritimus
ENSMPUG00000004546	SMG5	97	87.677	ENSVPAG00000009446	SMG5	92	87.677	Vicugna_pacos
ENSMPUG00000004546	SMG5	100	95.026	ENSVVUG00000005887	SMG5	93	95.026	Vulpes_vulpes
ENSMPUG00000004546	SMG5	82	65.322	ENSXETG00000033791	SMG5	99	64.565	Xenopus_tropicalis
ENSMPUG00000004546	SMG5	67	75.487	ENSXCOG00000004379	smg5	89	67.582	Xiphophorus_couchianus
ENSMPUG00000004546	SMG5	93	72.944	ENSXMAG00000013499	smg5	93	64.264	Xiphophorus_maculatus