EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMPUG00000004747 (Gene tree)
Gene ID: 101670050
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Mustela_putorius_furo
Status: putative
Strand: Minus strand
Length: 42955 bases
Position: chrGL896982.1:2766402-2809356
Accession: 101670050
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMPUP00000004709	zf-CCCH	PF00642.24	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMPUT00000004791	RC3H1-201	6734	-	ENSMPUP00000004709	1131 (aa)	XP_004761999	M3Y058

Gene Model

Click here to download ENSMPUG00000004747's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMPUG00000004747's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMPUG00000004747	RC3H1	92	54.463	ENSMPUG00000014141	RC3H2	87	53.973

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMPUG00000004747	RC3H1	100	96.649	ENSG00000135870	RC3H1	100	96.649	Homo_sapiens
ENSMPUG00000004747	RC3H1	100	98.147	ENSAMEG00000015657	RC3H1	100	98.147	Ailuropoda_melanoleuca
ENSMPUG00000004747	RC3H1	100	88.210	ENSAPLG00000005341	RC3H1	100	87.675	Anas_platyrhynchos
ENSMPUG00000004747	RC3H1	100	84.991	ENSACAG00000015271	RC3H1	100	84.878	Anolis_carolinensis
ENSMPUG00000004747	RC3H1	100	97.090	ENSANAG00000036716	RC3H1	100	97.090	Aotus_nancymaae
ENSMPUG00000004747	RC3H1	100	94.881	ENSBTAG00000052708	RC3H1	100	95.238	Bos_taurus
ENSMPUG00000004747	RC3H1	100	96.737	ENSCJAG00000009106	RC3H1	100	96.737	Callithrix_jacchus
ENSMPUG00000004747	RC3H1	100	98.058	ENSCAFG00000014434	RC3H1	100	98.058	Canis_familiaris
ENSMPUG00000004747	RC3H1	100	97.972	ENSCAFG00020017112	RC3H1	100	97.972	Canis_lupus_dingo
ENSMPUG00000004747	RC3H1	100	95.318	ENSCHIG00000002873	RC3H1	100	95.675	Capra_hircus
ENSMPUG00000004747	RC3H1	99	94.788	ENSTSYG00000003913	RC3H1	99	95.146	Carlito_syrichta
ENSMPUG00000004747	RC3H1	100	90.917	ENSCPOG00000004349	RC3H1	100	90.917	Cavia_porcellus
ENSMPUG00000004747	RC3H1	100	94.175	ENSCCAG00000025652	RC3H1	100	94.621	Cebus_capucinus
ENSMPUG00000004747	RC3H1	100	96.825	ENSCATG00000033497	RC3H1	100	96.825	Cercocebus_atys
ENSMPUG00000004747	RC3H1	100	94.175	ENSCLAG00000011267	RC3H1	100	94.444	Chinchilla_lanigera
ENSMPUG00000004747	RC3H1	96	96.964	ENSCSAG00000011823	RC3H1	85	96.964	Chlorocebus_sabaeus
ENSMPUG00000004747	RC3H1	100	89.377	ENSCPBG00000014670	RC3H1	100	88.938	Chrysemys_picta_bellii
ENSMPUG00000004747	RC3H1	100	96.828	ENSCANG00000032120	RC3H1	100	96.828	Colobus_angolensis_palliatus
ENSMPUG00000004747	RC3H1	100	94.170	ENSCGRG00001020812	Rc3h1	100	94.170	Cricetulus_griseus_chok1gshd
ENSMPUG00000004747	RC3H1	100	94.170	ENSCGRG00000011952	Rc3h1	100	94.170	Cricetulus_griseus_crigri
ENSMPUG00000004747	RC3H1	55	93.408	ENSDNOG00000011494	RC3H1	99	94.061	Dasypus_novemcinctus
ENSMPUG00000004747	RC3H1	100	95.146	ENSDORG00000004855	Rc3h1	100	95.146	Dipodomys_ordii
ENSMPUG00000004747	RC3H1	82	95.808	ENSETEG00000012064	RC3H1	87	95.808	Echinops_telfairi
ENSMPUG00000004747	RC3H1	100	95.410	ENSEASG00005017000	RC3H1	100	95.410	Equus_asinus_asinus
ENSMPUG00000004747	RC3H1	100	95.234	ENSECAG00000021208	RC3H1	100	95.234	Equus_caballus
ENSMPUG00000004747	RC3H1	89	82.746	ENSEEUG00000014861	RC3H1	89	86.986	Erinaceus_europaeus
ENSMPUG00000004747	RC3H1	100	97.795	ENSFCAG00000014924	RC3H1	100	97.795	Felis_catus
ENSMPUG00000004747	RC3H1	100	87.139	ENSFALG00000002947	RC3H1	100	86.515	Ficedula_albicollis
ENSMPUG00000004747	RC3H1	100	94.351	ENSFDAG00000013303	RC3H1	100	94.533	Fukomys_damarensis
ENSMPUG00000004747	RC3H1	100	87.357	ENSGALG00000004587	RC3H1	100	86.655	Gallus_gallus
ENSMPUG00000004747	RC3H1	100	87.621	ENSGAGG00000018194	RC3H1	100	87.533	Gopherus_agassizii
ENSMPUG00000004747	RC3H1	100	89.807	ENSGGOG00000005735	RC3H1	100	89.807	Gorilla_gorilla
ENSMPUG00000004747	RC3H1	88	88.363	ENSHGLG00000004183	-	100	88.363	Heterocephalus_glaber_female
ENSMPUG00000004747	RC3H1	100	93.557	ENSHGLG00100008577	RC3H1	100	93.827	Heterocephalus_glaber_male
ENSMPUG00000004747	RC3H1	100	96.201	ENSSTOG00000016033	RC3H1	100	96.201	Ictidomys_tridecemlineatus
ENSMPUG00000004747	RC3H1	100	94.616	ENSJJAG00000018915	Rc3h1	100	94.704	Jaculus_jaculus
ENSMPUG00000004747	RC3H1	100	75.000	ENSLACG00000016186	RC3H1	100	77.859	Latimeria_chalumnae
ENSMPUG00000004747	RC3H1	97	96.721	ENSLAFG00000004367	RC3H1	100	96.721	Loxodonta_africana
ENSMPUG00000004747	RC3H1	100	96.737	ENSMFAG00000033725	RC3H1	100	96.737	Macaca_fascicularis
ENSMPUG00000004747	RC3H1	100	96.649	ENSMMUG00000000630	RC3H1	100	96.649	Macaca_mulatta
ENSMPUG00000004747	RC3H1	100	96.825	ENSMNEG00000035968	RC3H1	100	96.825	Macaca_nemestrina
ENSMPUG00000004747	RC3H1	100	96.737	ENSMLEG00000037455	RC3H1	100	96.737	Mandrillus_leucophaeus
ENSMPUG00000004747	RC3H1	97	93.952	ENSMAUG00000020864	Rc3h1	93	93.952	Mesocricetus_auratus
ENSMPUG00000004747	RC3H1	100	96.558	ENSMICG00000003000	RC3H1	100	96.558	Microcebus_murinus
ENSMPUG00000004747	RC3H1	93	92.986	ENSMOCG00000016587	Rc3h1	98	92.986	Microtus_ochrogaster
ENSMPUG00000004747	RC3H1	100	91.799	ENSMODG00000004289	RC3H1	100	91.887	Monodelphis_domestica
ENSMPUG00000004747	RC3H1	100	93.375	MGP_CAROLIEiJ_G0014756	Rc3h1	100	93.551	Mus_caroli
ENSMPUG00000004747	RC3H1	100	93.375	ENSMUSG00000040423	Rc3h1	100	93.375	Mus_musculus
ENSMPUG00000004747	RC3H1	100	93.198	MGP_PahariEiJ_G0027992	Rc3h1	100	93.198	Mus_pahari
ENSMPUG00000004747	RC3H1	100	93.198	MGP_SPRETEiJ_G0015563	Rc3h1	100	93.198	Mus_spretus
ENSMPUG00000004747	RC3H1	100	94.783	ENSMLUG00000011127	RC3H1	100	94.788	Myotis_lucifugus
ENSMPUG00000004747	RC3H1	100	95.495	ENSNGAG00000011135	Rc3h1	100	95.495	Nannospalax_galili
ENSMPUG00000004747	RC3H1	100	96.561	ENSNLEG00000015327	RC3H1	100	96.561	Nomascus_leucogenys
ENSMPUG00000004747	RC3H1	99	82.478	ENSOPRG00000013068	RC3H1	99	82.847	Ochotona_princeps
ENSMPUG00000004747	RC3H1	100	94.268	ENSODEG00000014185	RC3H1	100	94.268	Octodon_degus
ENSMPUG00000004747	RC3H1	100	91.266	ENSOANG00000000924	RC3H1	100	91.354	Ornithorhynchus_anatinus
ENSMPUG00000004747	RC3H1	99	95.699	ENSOCUG00000004930	RC3H1	98	96.061	Oryctolagus_cuniculus
ENSMPUG00000004747	RC3H1	100	88.987	ENSOGAG00000004044	RC3H1	100	88.987	Otolemur_garnettii
ENSMPUG00000004747	RC3H1	100	95.793	ENSOARG00000013011	RC3H1	100	95.793	Ovis_aries
ENSMPUG00000004747	RC3H1	100	96.652	ENSPPAG00000039253	RC3H1	100	96.652	Pan_paniscus
ENSMPUG00000004747	RC3H1	100	97.264	ENSPPRG00000009007	RC3H1	100	97.264	Panthera_pardus
ENSMPUG00000004747	RC3H1	100	97.540	ENSPTIG00000015326	RC3H1	100	97.540	Panthera_tigris_altaica
ENSMPUG00000004747	RC3H1	100	96.652	ENSPTRG00000001702	RC3H1	100	96.652	Pan_troglodytes
ENSMPUG00000004747	RC3H1	100	96.737	ENSPANG00000008886	RC3H1	100	96.737	Papio_anubis
ENSMPUG00000004747	RC3H1	100	88.860	ENSPSIG00000016181	RC3H1	100	88.947	Pelodiscus_sinensis
ENSMPUG00000004747	RC3H1	100	94.081	ENSPEMG00000011966	Rc3h1	100	93.993	Peromyscus_maniculatus_bairdii
ENSMPUG00000004747	RC3H1	70	93.924	ENSPCIG00000002058	RC3H1	95	98.206	Phascolarctos_cinereus
ENSMPUG00000004747	RC3H1	100	93.210	ENSPPYG00000000490	RC3H1	98	95.698	Pongo_abelii
ENSMPUG00000004747	RC3H1	81	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSMPUG00000004747	RC3H1	83	95.401	ENSPCOG00000021795	RC3H1	96	95.406	Propithecus_coquereli
ENSMPUG00000004747	RC3H1	100	87.544	ENSPVAG00000007593	RC3H1	100	87.555	Pteropus_vampyrus
ENSMPUG00000004747	RC3H1	97	61.498	ENSPNAG00000023439	rc3h1a	95	90.766	Pygocentrus_nattereri
ENSMPUG00000004747	RC3H1	100	96.740	ENSRBIG00000037743	RC3H1	100	96.740	Rhinopithecus_bieti
ENSMPUG00000004747	RC3H1	100	96.649	ENSRROG00000036546	RC3H1	100	96.649	Rhinopithecus_roxellana
ENSMPUG00000004747	RC3H1	93	86.919	ENSSBOG00000010664	RC3H1	100	90.539	Saimiri_boliviensis_boliviensis
ENSMPUG00000004747	RC3H1	100	90.749	ENSSHAG00000007589	RC3H1	100	90.837	Sarcophilus_harrisii
ENSMPUG00000004747	RC3H1	87	86.486	ENSSARG00000004660	RC3H1	86	86.486	Sorex_araneus
ENSMPUG00000004747	RC3H1	100	83.786	ENSSPUG00000018472	RC3H1	100	83.947	Sphenodon_punctatus
ENSMPUG00000004747	RC3H1	100	96.734	ENSSSCG00000015498	RC3H1	100	96.734	Sus_scrofa
ENSMPUG00000004747	RC3H1	100	87.786	ENSTGUG00000004090	RC3H1	100	87.071	Taeniopygia_guttata
ENSMPUG00000004747	RC3H1	88	96.858	ENSTBEG00000005015	RC3H1	88	96.858	Tupaia_belangeri
ENSMPUG00000004747	RC3H1	100	96.127	ENSTTRG00000008572	RC3H1	100	96.127	Tursiops_truncatus
ENSMPUG00000004747	RC3H1	100	97.529	ENSUAMG00000019525	RC3H1	100	97.529	Ursus_americanus
ENSMPUG00000004747	RC3H1	100	98.060	ENSUMAG00000020087	RC3H1	100	98.060	Ursus_maritimus
ENSMPUG00000004747	RC3H1	91	98.423	ENSVPAG00000002591	RC3H1	92	98.423	Vicugna_pacos
ENSMPUG00000004747	RC3H1	100	97.713	ENSVVUG00000014201	RC3H1	100	97.713	Vulpes_vulpes
ENSMPUG00000004747	RC3H1	100	78.049	ENSXETG00000020030	rc3h1	100	77.787	Xenopus_tropicalis