EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMPUG00000006419 (Gene tree)
Gene ID: 101693308
Gene Symbol: CPSF1
Alias: CPSF160
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Mustela_putorius_furo
Status: putative
Strand: Plus strand
Length: 7737 bases
Position: chrGL897203.1:431900-439636
Accession: 2324
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMPUP00000006363	CPSF_A	PF03178.15	4.7e-92	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMPUT00000006474	CPSF1-201	4412	-	ENSMPUP00000006363	1446 (aa)	-	M3Y4W2

Gene Model

Click here to download ENSMPUG00000006419's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMPUG00000006419's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMPUG00000006419	CPSF1	93	95.707	ENSG00000071894	CPSF1	94	95.707	Homo_sapiens
ENSMPUG00000006419	CPSF1	94	77.966	ENSAPOG00000019621	cpsf1	97	78.371	Acanthochromis_polyacanthus
ENSMPUG00000006419	CPSF1	93	96.000	ENSAMEG00000005557	CPSF1	96	96.000	Ailuropoda_melanoleuca
ENSMPUG00000006419	CPSF1	93	78.756	ENSACIG00000006112	cpsf1	94	78.534	Amphilophus_citrinellus
ENSMPUG00000006419	CPSF1	93	79.706	ENSAOCG00000007120	cpsf1	94	79.559	Amphiprion_ocellaris
ENSMPUG00000006419	CPSF1	93	80.147	ENSAPEG00000005755	cpsf1	94	80.162	Amphiprion_percula
ENSMPUG00000006419	CPSF1	93	78.402	ENSATEG00000011097	cpsf1	96	78.474	Anabas_testudineus
ENSMPUG00000006419	CPSF1	87	81.660	ENSACAG00000009655	CPSF1	94	81.660	Anolis_carolinensis
ENSMPUG00000006419	CPSF1	93	95.778	ENSANAG00000036514	CPSF1	94	95.778	Aotus_nancymaae
ENSMPUG00000006419	CPSF1	95	78.052	ENSACLG00000012231	cpsf1	98	77.841	Astatotilapia_calliptera
ENSMPUG00000006419	CPSF1	93	74.132	ENSAMXG00000008485	cpsf1	93	74.205	Astyanax_mexicanus
ENSMPUG00000006419	CPSF1	93	95.926	ENSBTAG00000008355	CPSF1	98	95.242	Bos_taurus
ENSMPUG00000006419	CPSF1	92	32.744	WBGene00022301	cpsf-1	95	40.653	Caenorhabditis_elegans
ENSMPUG00000006419	CPSF1	93	95.556	ENSCJAG00000021421	CPSF1	94	95.556	Callithrix_jacchus
ENSMPUG00000006419	CPSF1	93	97.480	ENSCAFG00000001600	CPSF1	99	97.255	Canis_familiaris
ENSMPUG00000006419	CPSF1	93	97.480	ENSCAFG00020020821	CPSF1	93	97.480	Canis_lupus_dingo
ENSMPUG00000006419	CPSF1	93	90.667	ENSCHIG00000015833	CPSF1	94	90.667	Capra_hircus
ENSMPUG00000006419	CPSF1	93	95.926	ENSTSYG00000028560	CPSF1	94	95.926	Carlito_syrichta
ENSMPUG00000006419	CPSF1	92	95.281	ENSCAPG00000014921	CPSF1	96	95.281	Cavia_aperea
ENSMPUG00000006419	CPSF1	93	94.647	ENSCPOG00000011448	CPSF1	94	94.647	Cavia_porcellus
ENSMPUG00000006419	CPSF1	93	95.704	ENSCCAG00000037658	CPSF1	94	95.704	Cebus_capucinus
ENSMPUG00000006419	CPSF1	93	95.704	ENSCATG00000037234	CPSF1	94	95.704	Cercocebus_atys
ENSMPUG00000006419	CPSF1	93	96.071	ENSCLAG00000012166	CPSF1	94	96.071	Chinchilla_lanigera
ENSMPUG00000006419	CPSF1	93	95.556	ENSCSAG00000008502	CPSF1	94	95.556	Chlorocebus_sabaeus
ENSMPUG00000006419	CPSF1	97	85.724	ENSCPBG00000018910	CPSF1	95	85.643	Chrysemys_picta_bellii
ENSMPUG00000006419	CPSF1	90	48.058	ENSCING00000000514	-	94	47.982	Ciona_intestinalis
ENSMPUG00000006419	CPSF1	93	48.420	ENSCSAVG00000002293	-	99	46.517	Ciona_savignyi
ENSMPUG00000006419	CPSF1	93	91.790	ENSCANG00000032760	CPSF1	94	91.790	Colobus_angolensis_palliatus
ENSMPUG00000006419	CPSF1	93	95.330	ENSCGRG00001016344	Cpsf1	94	95.330	Cricetulus_griseus_chok1gshd
ENSMPUG00000006419	CPSF1	93	92.809	ENSCGRG00000003118	Cpsf1	93	93.032	Cricetulus_griseus_crigri
ENSMPUG00000006419	CPSF1	93	78.296	ENSCSEG00000013464	cpsf1	99	77.042	Cynoglossus_semilaevis
ENSMPUG00000006419	CPSF1	84	77.115	ENSCVAG00000014059	cpsf1	93	73.267	Cyprinodon_variegatus
ENSMPUG00000006419	CPSF1	93	79.544	ENSDARG00000034178	cpsf1	94	79.617	Danio_rerio
ENSMPUG00000006419	CPSF1	61	96.232	ENSDNOG00000043654	CPSF1	84	96.232	Dasypus_novemcinctus
ENSMPUG00000006419	CPSF1	93	95.701	ENSDORG00000006278	Cpsf1	96	95.701	Dipodomys_ordii
ENSMPUG00000006419	CPSF1	93	45.428	FBgn0024698	Cpsf160	93	45.618	Drosophila_melanogaster
ENSMPUG00000006419	CPSF1	75	97.315	ENSETEG00000006022	CPSF1	77	97.315	Echinops_telfairi
ENSMPUG00000006419	CPSF1	93	97.554	ENSEASG00005010774	CPSF1	93	97.554	Equus_asinus_asinus
ENSMPUG00000006419	CPSF1	93	97.628	ENSECAG00000022209	CPSF1	93	97.628	Equus_caballus
ENSMPUG00000006419	CPSF1	93	95.407	ENSEEUG00000000471	CPSF1	93	95.407	Erinaceus_europaeus
ENSMPUG00000006419	CPSF1	93	78.551	ENSELUG00000012271	cpsf1	99	77.938	Esox_lucius
ENSMPUG00000006419	CPSF1	93	95.997	ENSFDAG00000016060	CPSF1	94	95.997	Fukomys_damarensis
ENSMPUG00000006419	CPSF1	93	77.909	ENSFHEG00000016801	cpsf1	94	77.761	Fundulus_heteroclitus
ENSMPUG00000006419	CPSF1	93	78.335	ENSGMOG00000000796	cpsf1	94	78.335	Gadus_morhua
ENSMPUG00000006419	CPSF1	90	76.400	ENSGAFG00000018890	cpsf1	93	76.240	Gambusia_affinis
ENSMPUG00000006419	CPSF1	93	79.500	ENSGACG00000008703	cpsf1	99	75.355	Gasterosteus_aculeatus
ENSMPUG00000006419	CPSF1	93	83.988	ENSGAGG00000004276	CPSF1	98	87.657	Gopherus_agassizii
ENSMPUG00000006419	CPSF1	93	95.923	ENSGGOG00000016185	CPSF1	94	95.923	Gorilla_gorilla
ENSMPUG00000006419	CPSF1	93	80.015	ENSHBUG00000018900	cpsf1	94	79.793	Haplochromis_burtoni
ENSMPUG00000006419	CPSF1	93	96.071	ENSHGLG00000016139	CPSF1	94	96.071	Heterocephalus_glaber_female
ENSMPUG00000006419	CPSF1	93	95.997	ENSHGLG00100009750	CPSF1	94	95.997	Heterocephalus_glaber_male
ENSMPUG00000006419	CPSF1	93	77.408	ENSHCOG00000018509	cpsf1	94	77.625	Hippocampus_comes
ENSMPUG00000006419	CPSF1	93	76.725	ENSIPUG00000011259	cpsf1	94	76.725	Ictalurus_punctatus
ENSMPUG00000006419	CPSF1	93	95.569	ENSSTOG00000009957	CPSF1	96	95.569	Ictidomys_tridecemlineatus
ENSMPUG00000006419	CPSF1	93	95.775	ENSJJAG00000023002	Cpsf1	94	95.775	Jaculus_jaculus
ENSMPUG00000006419	CPSF1	84	84.590	ENSKMAG00000001940	cpsf1	92	84.590	Kryptolebias_marmoratus
ENSMPUG00000006419	CPSF1	93	77.673	ENSLBEG00000003601	cpsf1	94	78.107	Labrus_bergylta
ENSMPUG00000006419	CPSF1	80	80.929	ENSLACG00000000233	CPSF1	93	69.021	Latimeria_chalumnae
ENSMPUG00000006419	CPSF1	93	78.130	ENSLOCG00000008484	cpsf1	94	78.424	Lepisosteus_oculatus
ENSMPUG00000006419	CPSF1	93	95.478	ENSLAFG00000022601	CPSF1	97	95.478	Loxodonta_africana
ENSMPUG00000006419	CPSF1	93	95.556	ENSMFAG00000037013	CPSF1	94	95.556	Macaca_fascicularis
ENSMPUG00000006419	CPSF1	93	95.630	ENSMMUG00000007380	CPSF1	94	95.630	Macaca_mulatta
ENSMPUG00000006419	CPSF1	93	95.704	ENSMNEG00000043564	CPSF1	97	95.704	Macaca_nemestrina
ENSMPUG00000006419	CPSF1	93	95.630	ENSMLEG00000043010	CPSF1	94	95.630	Mandrillus_leucophaeus
ENSMPUG00000006419	CPSF1	93	78.947	ENSMAMG00000003803	cpsf1	96	78.947	Mastacembelus_armatus
ENSMPUG00000006419	CPSF1	93	78.460	ENSMZEG00005001168	cpsf1	94	78.164	Maylandia_zebra
ENSMPUG00000006419	CPSF1	93	95.552	ENSMAUG00000003601	Cpsf1	94	95.552	Mesocricetus_auratus
ENSMPUG00000006419	CPSF1	93	96.664	ENSMICG00000015767	CPSF1	94	96.664	Microcebus_murinus
ENSMPUG00000006419	CPSF1	93	95.552	ENSMOCG00000022758	Cpsf1	94	95.552	Microtus_ochrogaster
ENSMPUG00000006419	CPSF1	93	79.512	ENSMMOG00000021245	cpsf1	94	79.364	Mola_mola
ENSMPUG00000006419	CPSF1	93	93.427	ENSMODG00000010755	CPSF1	93	93.427	Monodelphis_domestica
ENSMPUG00000006419	CPSF1	96	76.643	ENSMALG00000020545	cpsf1	94	78.484	Monopterus_albus
ENSMPUG00000006419	CPSF1	93	95.997	MGP_CAROLIEiJ_G0019936	Cpsf1	94	95.997	Mus_caroli
ENSMPUG00000006419	CPSF1	93	95.994	ENSMUSG00000034022	Cpsf1	94	95.923	Mus_musculus
ENSMPUG00000006419	CPSF1	93	95.849	MGP_PahariEiJ_G0019946	Cpsf1	94	95.849	Mus_pahari
ENSMPUG00000006419	CPSF1	93	95.923	MGP_SPRETEiJ_G0020839	Cpsf1	94	95.923	Mus_spretus
ENSMPUG00000006419	CPSF1	93	95.775	ENSNGAG00000022460	Cpsf1	94	95.775	Nannospalax_galili
ENSMPUG00000006419	CPSF1	93	75.628	ENSNBRG00000000813	cpsf1	94	75.628	Neolamprologus_brichardi
ENSMPUG00000006419	CPSF1	76	97.452	ENSNLEG00000010633	-	87	97.452	Nomascus_leucogenys
ENSMPUG00000006419	CPSF1	79	96.835	ENSMEUG00000014922	CPSF1	82	96.835	Notamacropus_eugenii
ENSMPUG00000006419	CPSF1	59	96.939	ENSOPRG00000004693	-	70	96.939	Ochotona_princeps
ENSMPUG00000006419	CPSF1	93	96.219	ENSODEG00000013995	CPSF1	94	96.219	Octodon_degus
ENSMPUG00000006419	CPSF1	93	80.399	ENSONIG00000007676	cpsf1	94	80.178	Oreochromis_niloticus
ENSMPUG00000006419	CPSF1	58	92.857	ENSOANG00000010716	CPSF1	88	92.857	Ornithorhynchus_anatinus
ENSMPUG00000006419	CPSF1	96	76.615	ENSORLG00000013544	cpsf1	92	86.420	Oryzias_latipes
ENSMPUG00000006419	CPSF1	96	76.756	ENSORLG00020021693	cpsf1	92	86.420	Oryzias_latipes_hni
ENSMPUG00000006419	CPSF1	93	78.245	ENSORLG00015009979	cpsf1	94	78.173	Oryzias_latipes_hsok
ENSMPUG00000006419	CPSF1	93	78.198	ENSOMEG00000011849	cpsf1	94	78.052	Oryzias_melastigma
ENSMPUG00000006419	CPSF1	93	96.074	ENSOGAG00000000315	CPSF1	94	96.074	Otolemur_garnettii
ENSMPUG00000006419	CPSF1	93	95.926	ENSPPAG00000019280	CPSF1	94	95.926	Pan_paniscus
ENSMPUG00000006419	CPSF1	93	95.926	ENSPTRG00000049288	-	94	95.926	Pan_troglodytes
ENSMPUG00000006419	CPSF1	93	96.003	ENSPTRG00000051253	-	93	95.259	Pan_troglodytes
ENSMPUG00000006419	CPSF1	93	95.556	ENSPANG00000015005	CPSF1	97	95.556	Papio_anubis
ENSMPUG00000006419	CPSF1	93	80.857	ENSPKIG00000002582	cpsf1	99	79.985	Paramormyrops_kingsleyae
ENSMPUG00000006419	CPSF1	94	93.103	ENSPCIG00000009035	CPSF1	94	92.560	Phascolarctos_cinereus
ENSMPUG00000006419	CPSF1	93	76.962	ENSPFOG00000012870	cpsf1	94	77.040	Poecilia_formosa
ENSMPUG00000006419	CPSF1	93	76.984	ENSPREG00000016307	cpsf1	94	76.984	Poecilia_reticulata
ENSMPUG00000006419	CPSF1	93	87.111	ENSPPYG00000018973	CPSF1	93	87.111	Pongo_abelii
ENSMPUG00000006419	CPSF1	88	94.379	ENSPCAG00000011541	CPSF1	91	94.379	Procavia_capensis
ENSMPUG00000006419	CPSF1	93	92.370	ENSPCOG00000020001	CPSF1	94	92.370	Propithecus_coquereli
ENSMPUG00000006419	CPSF1	84	98.551	ENSPVAG00000006761	CPSF1	85	98.551	Pteropus_vampyrus
ENSMPUG00000006419	CPSF1	93	78.989	ENSPNYG00000004906	cpsf1	97	78.773	Pundamilia_nyererei
ENSMPUG00000006419	CPSF1	93	74.963	ENSPNAG00000024395	cpsf1	94	74.963	Pygocentrus_nattereri
ENSMPUG00000006419	CPSF1	93	95.701	ENSRNOG00000030705	Cpsf1	94	95.701	Rattus_norvegicus
ENSMPUG00000006419	CPSF1	93	95.630	ENSRBIG00000044907	CPSF1	94	95.630	Rhinopithecus_bieti
ENSMPUG00000006419	CPSF1	93	95.556	ENSRROG00000044861	CPSF1	94	95.556	Rhinopithecus_roxellana
ENSMPUG00000006419	CPSF1	93	95.778	ENSSBOG00000027177	CPSF1	97	95.778	Saimiri_boliviensis_boliviensis
ENSMPUG00000006419	CPSF1	93	93.279	ENSSHAG00000006500	CPSF1	93	93.279	Sarcophilus_harrisii
ENSMPUG00000006419	CPSF1	93	80.809	ENSSFOG00015004606	cpsf1	99	80.662	Scleropages_formosus
ENSMPUG00000006419	CPSF1	93	78.917	ENSSMAG00000020547	cpsf1	94	78.989	Scophthalmus_maximus
ENSMPUG00000006419	CPSF1	93	80.044	ENSSDUG00000001100	cpsf1	94	79.823	Seriola_dumerili
ENSMPUG00000006419	CPSF1	93	80.104	ENSSLDG00000003619	cpsf1	94	80.178	Seriola_lalandi_dorsalis
ENSMPUG00000006419	CPSF1	85	92.724	ENSSARG00000003643	CPSF1	88	92.724	Sorex_araneus
ENSMPUG00000006419	CPSF1	93	87.361	ENSSPUG00000014396	CPSF1	98	87.361	Sphenodon_punctatus
ENSMPUG00000006419	CPSF1	93	78.283	ENSSPAG00000005349	cpsf1	94	78.644	Stegastes_partitus
ENSMPUG00000006419	CPSF1	93	95.923	ENSSSCG00000005906	CPSF1	93	95.923	Sus_scrofa
ENSMPUG00000006419	CPSF1	93	78.042	ENSTRUG00000013134	cpsf1	97	78.058	Takifugu_rubripes
ENSMPUG00000006419	CPSF1	93	79.544	ENSTNIG00000014027	cpsf1	94	79.017	Tetraodon_nigroviridis
ENSMPUG00000006419	CPSF1	72	92.277	ENSTBEG00000001756	CPSF1	88	92.277	Tupaia_belangeri
ENSMPUG00000006419	CPSF1	83	96.814	ENSTTRG00000001937	CPSF1	83	96.814	Tursiops_truncatus
ENSMPUG00000006419	CPSF1	93	97.776	ENSUAMG00000006476	CPSF1	95	97.776	Ursus_americanus
ENSMPUG00000006419	CPSF1	93	78.550	ENSXCOG00000003608	cpsf1	94	78.550	Xiphophorus_couchianus
ENSMPUG00000006419	CPSF1	93	78.049	ENSXMAG00000005798	cpsf1	94	77.975	Xiphophorus_maculatus