EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMPUG00000006518 (Gene tree)
Gene ID: 101684261
Gene Symbol: RBM38
Alias: HSRNASEB|RNPC1|SEB4D|dJ800J21.2|seb4B
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Mustela_putorius_furo
Status: putative
Strand: Plus strand
Length: 14198 bases
Position: chrGL896972.1:3712671-3726868
Accession: 15818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMPUP00000006463	RRM_1	PF00076.22	2.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMPUT00000006574	RBM38-201	699	-	ENSMPUP00000006463	202 (aa)	-	M3Y562

Gene Model

Click here to download ENSMPUG00000006518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMPUG00000006518's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMPUG00000006518	RBM38	93	97.861	ENSG00000132819	RBM38	94	99.138	Homo_sapiens
ENSMPUG00000006518	RBM38	98	63.415	ENSAPOG00000003301	rbm38	74	65.426	Acanthochromis_polyacanthus
ENSMPUG00000006518	RBM38	96	71.066	ENSAPOG00000009939	-	83	73.404	Acanthochromis_polyacanthus
ENSMPUG00000006518	RBM38	97	61.576	ENSACIG00000000010	rbm38	74	63.830	Amphilophus_citrinellus
ENSMPUG00000006518	RBM38	92	73.936	ENSACIG00000012502	-	100	88.034	Amphilophus_citrinellus
ENSMPUG00000006518	RBM38	96	70.558	ENSAOCG00000012559	RBM38	79	73.404	Amphiprion_ocellaris
ENSMPUG00000006518	RBM38	98	63.415	ENSAOCG00000013497	-	74	65.426	Amphiprion_ocellaris
ENSMPUG00000006518	RBM38	91	72.340	ENSAPEG00000023581	-	75	73.404	Amphiprion_percula
ENSMPUG00000006518	RBM38	98	63.415	ENSAPEG00000013137	rbm38	80	65.426	Amphiprion_percula
ENSMPUG00000006518	RBM38	89	75.275	ENSATEG00000016710	-	72	75.275	Anabas_testudineus
ENSMPUG00000006518	RBM38	98	62.621	ENSATEG00000016366	rbm38	75	68.362	Anabas_testudineus
ENSMPUG00000006518	RBM38	93	80.749	ENSACAG00000016238	RBM38	75	81.522	Anolis_carolinensis
ENSMPUG00000006518	RBM38	93	96.257	ENSANAG00000031959	RBM38	86	96.216	Aotus_nancymaae
ENSMPUG00000006518	RBM38	92	75.000	ENSACLG00000019514	-	72	76.374	Astatotilapia_calliptera
ENSMPUG00000006518	RBM38	94	73.958	ENSAMXG00000015601	-	76	75.269	Astyanax_mexicanus
ENSMPUG00000006518	RBM38	94	62.632	ENSAMXG00000038120	rbm38	74	65.746	Astyanax_mexicanus
ENSMPUG00000006518	RBM38	93	97.326	ENSBTAG00000008105	RBM38	77	97.297	Bos_taurus
ENSMPUG00000006518	RBM38	68	60.870	WBGene00006321	sup-12	59	84.270	Caenorhabditis_elegans
ENSMPUG00000006518	RBM38	93	96.257	ENSCJAG00000019139	RBM38	81	98.980	Callithrix_jacchus
ENSMPUG00000006518	RBM38	93	98.930	ENSCAFG00020021943	RBM38	78	98.930	Canis_lupus_dingo
ENSMPUG00000006518	RBM38	93	97.326	ENSCHIG00000002609	RBM38	77	97.297	Capra_hircus
ENSMPUG00000006518	RBM38	93	96.791	ENSCPOG00000012781	RBM38	77	96.757	Cavia_porcellus
ENSMPUG00000006518	RBM38	93	96.257	ENSCCAG00000036872	RBM38	81	98.980	Cebus_capucinus
ENSMPUG00000006518	RBM38	93	97.861	ENSCATG00000032133	RBM38	81	98.980	Cercocebus_atys
ENSMPUG00000006518	RBM38	93	96.791	ENSCLAG00000005906	RBM38	80	96.757	Chinchilla_lanigera
ENSMPUG00000006518	RBM38	93	97.861	ENSCSAG00000015503	RBM38	78	97.838	Chlorocebus_sabaeus
ENSMPUG00000006518	RBM38	93	85.027	ENSCPBG00000024059	RBM38	84	85.870	Chrysemys_picta_bellii
ENSMPUG00000006518	RBM38	52	79.245	ENSCSAVG00000001132	-	59	62.658	Ciona_savignyi
ENSMPUG00000006518	RBM38	95	70.681	ENSCANG00000030105	-	67	71.351	Colobus_angolensis_palliatus
ENSMPUG00000006518	RBM38	91	92.935	ENSCGRG00001012928	Rbm38	78	92.973	Cricetulus_griseus_chok1gshd
ENSMPUG00000006518	RBM38	73	67.333	ENSCSEG00000020943	rbm38	60	60.326	Cynoglossus_semilaevis
ENSMPUG00000006518	RBM38	89	74.586	ENSCSEG00000004701	-	78	74.725	Cynoglossus_semilaevis
ENSMPUG00000006518	RBM38	93	75.132	ENSCVAG00000005472	-	72	77.473	Cyprinodon_variegatus
ENSMPUG00000006518	RBM38	89	65.934	ENSCVAG00000015952	rbm38	72	65.934	Cyprinodon_variegatus
ENSMPUG00000006518	RBM38	94	70.370	ENSDARG00000058818	rbm38	74	72.928	Danio_rerio
ENSMPUG00000006518	RBM38	100	87.624	ENSDNOG00000032004	RBM38	93	87.624	Dasypus_novemcinctus
ENSMPUG00000006518	RBM38	68	67.883	ENSEBUG00000015164	rbm38	83	67.883	Eptatretus_burgeri
ENSMPUG00000006518	RBM38	98	93.000	ENSECAG00000007700	RBM38	77	96.757	Equus_caballus
ENSMPUG00000006518	RBM38	98	92.000	ENSEEUG00000013489	RBM38	78	97.312	Erinaceus_europaeus
ENSMPUG00000006518	RBM38	94	71.066	ENSELUG00000005849	-	76	72.251	Esox_lucius
ENSMPUG00000006518	RBM38	99	63.107	ENSELUG00000000585	-	80	67.568	Esox_lucius
ENSMPUG00000006518	RBM38	93	100.000	ENSFCAG00000042916	RBM38	81	100.000	Felis_catus
ENSMPUG00000006518	RBM38	86	83.815	ENSFALG00000010805	RBM38	90	83.815	Ficedula_albicollis
ENSMPUG00000006518	RBM38	93	75.263	ENSFHEG00000006160	-	79	77.473	Fundulus_heteroclitus
ENSMPUG00000006518	RBM38	89	64.481	ENSFHEG00000017748	rbm38	72	64.481	Fundulus_heteroclitus
ENSMPUG00000006518	RBM38	89	74.176	ENSGMOG00000016655	-	96	75.275	Gadus_morhua
ENSMPUG00000006518	RBM38	93	82.979	ENSGALG00000026081	RBM38	84	84.239	Gallus_gallus
ENSMPUG00000006518	RBM38	96	64.767	ENSGACG00000015224	rbm38	85	66.667	Gasterosteus_aculeatus
ENSMPUG00000006518	RBM38	91	71.809	ENSGACG00000009873	-	84	71.809	Gasterosteus_aculeatus
ENSMPUG00000006518	RBM38	93	85.561	ENSGAGG00000001187	RBM38	84	86.413	Gopherus_agassizii
ENSMPUG00000006518	RBM38	91	64.362	ENSHBUG00000012058	rbm38	73	67.045	Haplochromis_burtoni
ENSMPUG00000006518	RBM38	92	75.000	ENSHBUG00000011778	-	76	76.374	Haplochromis_burtoni
ENSMPUG00000006518	RBM38	93	93.048	ENSHGLG00000015077	RBM38	77	92.973	Heterocephalus_glaber_female
ENSMPUG00000006518	RBM38	93	73.016	ENSHCOG00000005622	-	51	75.275	Hippocampus_comes
ENSMPUG00000006518	RBM38	74	66.225	ENSHCOG00000019040	rbm38	65	66.225	Hippocampus_comes
ENSMPUG00000006518	RBM38	91	73.656	ENSIPUG00000019349	-	75	73.656	Ictalurus_punctatus
ENSMPUG00000006518	RBM38	95	56.796	ENSKMAG00000012402	rbm38	79	59.574	Kryptolebias_marmoratus
ENSMPUG00000006518	RBM38	89	73.626	ENSLBEG00000016163	RBM38	76	74.725	Labrus_bergylta
ENSMPUG00000006518	RBM38	95	63.265	ENSLBEG00000018878	rbm38	74	64.894	Labrus_bergylta
ENSMPUG00000006518	RBM38	97	74.372	ENSLOCG00000003456	rbm38	78	77.419	Lepisosteus_oculatus
ENSMPUG00000006518	RBM38	93	97.861	ENSMFAG00000043808	RBM38	81	98.980	Macaca_fascicularis
ENSMPUG00000006518	RBM38	93	97.861	ENSMMUG00000031391	RBM38	81	98.980	Macaca_mulatta
ENSMPUG00000006518	RBM38	93	97.861	ENSMNEG00000034683	RBM38	81	98.980	Macaca_nemestrina
ENSMPUG00000006518	RBM38	54	83.486	ENSMLEG00000043261	-	88	83.486	Mandrillus_leucophaeus
ENSMPUG00000006518	RBM38	91	65.426	ENSMAMG00000024135	rbm38	74	65.426	Mastacembelus_armatus
ENSMPUG00000006518	RBM38	91	74.468	ENSMAMG00000020499	RBM38	75	74.468	Mastacembelus_armatus
ENSMPUG00000006518	RBM38	91	64.362	ENSMZEG00005026036	rbm38	74	64.362	Maylandia_zebra
ENSMPUG00000006518	RBM38	92	75.000	ENSMZEG00005000849	-	76	76.374	Maylandia_zebra
ENSMPUG00000006518	RBM38	91	94.022	ENSMAUG00000021211	Rbm38	78	94.054	Mesocricetus_auratus
ENSMPUG00000006518	RBM38	93	97.861	ENSMICG00000038011	RBM38	86	98.378	Microcebus_murinus
ENSMPUG00000006518	RBM38	91	94.565	ENSMOCG00000008715	Rbm38	78	94.595	Microtus_ochrogaster
ENSMPUG00000006518	RBM38	94	72.917	ENSMMOG00000020051	-	78	75.275	Mola_mola
ENSMPUG00000006518	RBM38	94	83.684	ENSMODG00000016458	RBM38	77	85.326	Monodelphis_domestica
ENSMPUG00000006518	RBM38	89	75.275	ENSMALG00000004680	RBM38	67	75.275	Monopterus_albus
ENSMPUG00000006518	RBM38	76	69.231	ENSMALG00000022327	rbm38	67	69.677	Monopterus_albus
ENSMPUG00000006518	RBM38	95	93.194	MGP_CAROLIEiJ_G0024745	Rbm38	78	94.595	Mus_caroli
ENSMPUG00000006518	RBM38	95	93.717	ENSMUSG00000027510	Rbm38	78	95.135	Mus_musculus
ENSMPUG00000006518	RBM38	95	92.670	MGP_PahariEiJ_G0026186	Rbm38	78	94.054	Mus_pahari
ENSMPUG00000006518	RBM38	95	93.194	MGP_SPRETEiJ_G0025665	Rbm38	78	94.595	Mus_spretus
ENSMPUG00000006518	RBM38	93	93.583	ENSMLUG00000011140	RBM38	86	93.514	Myotis_lucifugus
ENSMPUG00000006518	RBM38	92	75.000	ENSNBRG00000022545	-	72	76.374	Neolamprologus_brichardi
ENSMPUG00000006518	RBM38	98	61.951	ENSNBRG00000022685	rbm38	75	65.761	Neolamprologus_brichardi
ENSMPUG00000006518	RBM38	57	84.348	ENSMEUG00000005475	-	86	84.348	Notamacropus_eugenii
ENSMPUG00000006518	RBM38	93	96.257	ENSODEG00000007980	RBM38	77	96.216	Octodon_degus
ENSMPUG00000006518	RBM38	92	75.000	ENSONIG00000020324	-	72	76.374	Oreochromis_niloticus
ENSMPUG00000006518	RBM38	91	64.894	ENSONIG00000017073	rbm38	76	64.894	Oreochromis_niloticus
ENSMPUG00000006518	RBM38	93	82.353	ENSOANG00000009259	RBM38	71	84.239	Ornithorhynchus_anatinus
ENSMPUG00000006518	RBM38	89	74.176	ENSORLG00000027180	-	72	75.275	Oryzias_latipes
ENSMPUG00000006518	RBM38	91	62.234	ENSORLG00000012154	rbm38	74	62.234	Oryzias_latipes
ENSMPUG00000006518	RBM38	89	74.176	ENSORLG00020020751	-	72	75.275	Oryzias_latipes_hni
ENSMPUG00000006518	RBM38	91	63.298	ENSORLG00020017871	rbm38	74	63.298	Oryzias_latipes_hni
ENSMPUG00000006518	RBM38	89	74.176	ENSORLG00015017040	-	72	75.275	Oryzias_latipes_hsok
ENSMPUG00000006518	RBM38	98	60.488	ENSORLG00015012606	rbm38	77	62.703	Oryzias_latipes_hsok
ENSMPUG00000006518	RBM38	98	60.976	ENSOMEG00000006805	rbm38	74	63.298	Oryzias_melastigma
ENSMPUG00000006518	RBM38	89	73.077	ENSOMEG00000023912	-	72	74.176	Oryzias_melastigma
ENSMPUG00000006518	RBM38	93	97.326	ENSOGAG00000029136	RBM38	77	97.297	Otolemur_garnettii
ENSMPUG00000006518	RBM38	93	100.000	ENSPPRG00000009507	RBM38	81	100.000	Panthera_pardus
ENSMPUG00000006518	RBM38	93	97.861	ENSPTRG00000013661	RBM38	89	97.838	Pan_troglodytes
ENSMPUG00000006518	RBM38	61	99.194	ENSPTRG00000045845	-	68	99.194	Pan_troglodytes
ENSMPUG00000006518	RBM38	93	97.861	ENSPANG00000020919	-	81	98.980	Papio_anubis
ENSMPUG00000006518	RBM38	90	78.022	ENSPANG00000033127	-	78	76.503	Papio_anubis
ENSMPUG00000006518	RBM38	89	72.283	ENSPKIG00000025417	rbm38	74	72.283	Paramormyrops_kingsleyae
ENSMPUG00000006518	RBM38	89	74.176	ENSPKIG00000018122	-	100	87.179	Paramormyrops_kingsleyae
ENSMPUG00000006518	RBM38	91	85.870	ENSPSIG00000011649	RBM38	78	85.870	Pelodiscus_sinensis
ENSMPUG00000006518	RBM38	97	61.000	ENSPMGG00000011343	rbm38	74	64.706	Periophthalmus_magnuspinnatus
ENSMPUG00000006518	RBM38	89	71.739	ENSPMGG00000017094	-	72	72.283	Periophthalmus_magnuspinnatus
ENSMPUG00000006518	RBM38	98	81.407	ENSPCIG00000013648	RBM38	77	84.783	Phascolarctos_cinereus
ENSMPUG00000006518	RBM38	89	62.500	ENSPFOG00000011658	rbm38	72	65.217	Poecilia_formosa
ENSMPUG00000006518	RBM38	93	75.648	ENSPLAG00000002500	-	72	77.838	Poecilia_latipinna
ENSMPUG00000006518	RBM38	89	63.587	ENSPLAG00000005218	rbm38	72	65.217	Poecilia_latipinna
ENSMPUG00000006518	RBM38	89	62.500	ENSPMEG00000015770	rbm38	72	65.217	Poecilia_mexicana
ENSMPUG00000006518	RBM38	89	63.043	ENSPREG00000007398	rbm38	72	65.761	Poecilia_reticulata
ENSMPUG00000006518	RBM38	93	97.326	ENSPCOG00000026201	RBM38	80	98.980	Propithecus_coquereli
ENSMPUG00000006518	RBM38	91	62.500	ENSPVAG00000006457	RBM38	77	62.500	Pteropus_vampyrus
ENSMPUG00000006518	RBM38	98	60.976	ENSPNYG00000021373	rbm38	76	65.385	Pundamilia_nyererei
ENSMPUG00000006518	RBM38	92	75.000	ENSPNYG00000019727	-	100	88.889	Pundamilia_nyererei
ENSMPUG00000006518	RBM38	93	73.016	ENSPNAG00000015123	-	96	77.273	Pygocentrus_nattereri
ENSMPUG00000006518	RBM38	92	71.351	ENSPNAG00000010596	rbm38	75	71.585	Pygocentrus_nattereri
ENSMPUG00000006518	RBM38	93	95.722	ENSRNOG00000006420	Rbm38	78	95.676	Rattus_norvegicus
ENSMPUG00000006518	RBM38	95	75.916	ENSRROG00000036388	-	76	76.757	Rhinopithecus_roxellana
ENSMPUG00000006518	RBM38	93	95.722	ENSSBOG00000031053	RBM38	92	98.980	Saimiri_boliviensis_boliviensis
ENSMPUG00000006518	RBM38	95	69.948	ENSSFOG00015004453	rbm38	76	75.824	Scleropages_formosus
ENSMPUG00000006518	RBM38	98	64.390	ENSSDUG00000022611	rbm38	74	66.489	Seriola_dumerili
ENSMPUG00000006518	RBM38	89	75.275	ENSSDUG00000021082	RBM38	72	75.275	Seriola_dumerili
ENSMPUG00000006518	RBM38	89	75.275	ENSSLDG00000011778	RBM38	72	75.275	Seriola_lalandi_dorsalis
ENSMPUG00000006518	RBM38	98	64.390	ENSSLDG00000010845	rbm38	81	66.489	Seriola_lalandi_dorsalis
ENSMPUG00000006518	RBM38	98	63.415	ENSSPAG00000011113	rbm38	74	65.426	Stegastes_partitus
ENSMPUG00000006518	RBM38	89	73.626	ENSSPAG00000020989	RBM38	80	74.176	Stegastes_partitus
ENSMPUG00000006518	RBM38	93	98.930	ENSSSCG00000007504	RBM38	78	98.930	Sus_scrofa
ENSMPUG00000006518	RBM38	89	63.388	ENSTRUG00000024954	rbm38	73	63.388	Takifugu_rubripes
ENSMPUG00000006518	RBM38	89	75.691	ENSTRUG00000019869	-	72	75.824	Takifugu_rubripes
ENSMPUG00000006518	RBM38	94	73.158	ENSTNIG00000007093	-	80	75.824	Tetraodon_nigroviridis
ENSMPUG00000006518	RBM38	93	100.000	ENSUAMG00000019780	RBM38	78	100.000	Ursus_americanus
ENSMPUG00000006518	RBM38	93	98.930	ENSVVUG00000017246	RBM38	78	98.930	Vulpes_vulpes
ENSMPUG00000006518	RBM38	93	78.191	ENSXETG00000011268	rbm38	82	79.348	Xenopus_tropicalis
ENSMPUG00000006518	RBM38	55	86.325	ENSXCOG00000017324	-	53	86.325	Xiphophorus_couchianus
ENSMPUG00000006518	RBM38	89	65.574	ENSXMAG00000023662	rbm38	72	65.574	Xiphophorus_maculatus