EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMPUG00000006545 (Gene tree)
Gene ID: 101677818
Gene Symbol: SND1
Alias: TDRD11|p100
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Mustela_putorius_furo
Status: putative
Strand: Minus strand
Length: 411971 bases
Position: chrGL896904.1:11540630-11952600
Accession: 101677818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMPUP00000006489	TUDOR	PF00567.24	4.3e-28	1	1
ENSMPUP00000006489	SNase	PF00565.17	3.5e-69	1	5
ENSMPUP00000006489	SNase	PF00565.17	3.5e-69	2	5
ENSMPUP00000006489	SNase	PF00565.17	3.5e-69	3	5
ENSMPUP00000006489	SNase	PF00565.17	3.5e-69	4	5
ENSMPUP00000006489	SNase	PF00565.17	3.5e-69	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMPUT00000006601	SND1-201	3142	-	ENSMPUP00000006489	909 (aa)	XP_004741894	M3Y588

Gene Model

Click here to download ENSMPUG00000006545's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMPUG00000006545's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMPUG00000006545	SND1	100	98.352	ENSG00000197157	SND1	100	98.352	Homo_sapiens
ENSMPUG00000006545	SND1	100	83.333	ENSAPOG00000017599	snd1	100	83.772	Acanthochromis_polyacanthus
ENSMPUG00000006545	SND1	100	98.465	ENSAMEG00000004664	SND1	94	98.465	Ailuropoda_melanoleuca
ENSMPUG00000006545	SND1	98	81.971	ENSACIG00000003551	snd1	100	81.010	Amphilophus_citrinellus
ENSMPUG00000006545	SND1	100	83.114	ENSAOCG00000014166	snd1	100	83.553	Amphiprion_ocellaris
ENSMPUG00000006545	SND1	100	83.114	ENSAPEG00000007067	snd1	100	83.553	Amphiprion_percula
ENSMPUG00000006545	SND1	98	82.905	ENSATEG00000018475	snd1	89	82.905	Anabas_testudineus
ENSMPUG00000006545	SND1	100	98.571	ENSANAG00000034463	SND1	100	98.571	Aotus_nancymaae
ENSMPUG00000006545	SND1	100	83.333	ENSACLG00000022897	snd1	100	83.333	Astatotilapia_calliptera
ENSMPUG00000006545	SND1	99	84.158	ENSAMXG00000016318	snd1	99	84.158	Astyanax_mexicanus
ENSMPUG00000006545	SND1	100	98.352	ENSBTAG00000010692	SND1	100	98.352	Bos_taurus
ENSMPUG00000006545	SND1	98	47.091	WBGene00006626	tsn-1	98	47.091	Caenorhabditis_elegans
ENSMPUG00000006545	SND1	100	98.352	ENSCJAG00000017668	SND1	100	98.352	Callithrix_jacchus
ENSMPUG00000006545	SND1	100	98.791	ENSCAFG00000001700	SND1	100	98.791	Canis_familiaris
ENSMPUG00000006545	SND1	100	98.791	ENSCAFG00020021639	SND1	100	98.791	Canis_lupus_dingo
ENSMPUG00000006545	SND1	100	98.681	ENSCHIG00000023390	SND1	100	98.681	Capra_hircus
ENSMPUG00000006545	SND1	73	99.120	ENSTSYG00000004979	SND1	96	99.120	Carlito_syrichta
ENSMPUG00000006545	SND1	98	84.693	ENSCAPG00000010677	SND1	98	84.693	Cavia_aperea
ENSMPUG00000006545	SND1	100	97.692	ENSCPOG00000006251	SND1	100	97.692	Cavia_porcellus
ENSMPUG00000006545	SND1	100	98.681	ENSCCAG00000036847	SND1	100	98.681	Cebus_capucinus
ENSMPUG00000006545	SND1	100	98.571	ENSCATG00000035214	SND1	100	98.571	Cercocebus_atys
ENSMPUG00000006545	SND1	100	97.912	ENSCLAG00000011796	SND1	100	97.912	Chinchilla_lanigera
ENSMPUG00000006545	SND1	100	98.571	ENSCSAG00000010182	SND1	100	98.571	Chlorocebus_sabaeus
ENSMPUG00000006545	SND1	78	91.176	ENSCHOG00000002218	SND1	86	91.176	Choloepus_hoffmanni
ENSMPUG00000006545	SND1	100	91.209	ENSCPBG00000018094	SND1	100	91.978	Chrysemys_picta_bellii
ENSMPUG00000006545	SND1	98	57.095	ENSCING00000000524	-	98	57.095	Ciona_intestinalis
ENSMPUG00000006545	SND1	99	57.877	ENSCSAVG00000008807	-	99	57.877	Ciona_savignyi
ENSMPUG00000006545	SND1	100	98.571	ENSCANG00000035119	SND1	100	98.571	Colobus_angolensis_palliatus
ENSMPUG00000006545	SND1	100	97.253	ENSCGRG00001022514	Snd1	100	97.253	Cricetulus_griseus_chok1gshd
ENSMPUG00000006545	SND1	97	97.398	ENSCGRG00000012277	Snd1	99	97.398	Cricetulus_griseus_crigri
ENSMPUG00000006545	SND1	100	82.675	ENSCSEG00000008661	snd1	100	83.114	Cynoglossus_semilaevis
ENSMPUG00000006545	SND1	100	84.101	ENSCVAG00000010316	snd1	100	84.101	Cyprinodon_variegatus
ENSMPUG00000006545	SND1	100	84.337	ENSDARG00000006766	snd1	99	85.965	Danio_rerio
ENSMPUG00000006545	SND1	97	95.716	ENSDNOG00000006795	SND1	100	95.716	Dasypus_novemcinctus
ENSMPUG00000006545	SND1	100	98.352	ENSDORG00000000336	Snd1	100	98.352	Dipodomys_ordii
ENSMPUG00000006545	SND1	98	50.595	FBgn0035121	Tudor-SN	99	50.106	Drosophila_melanogaster
ENSMPUG00000006545	SND1	90	100.000	ENSETEG00000000375	SND1	92	100.000	Echinops_telfairi
ENSMPUG00000006545	SND1	60	67.838	ENSEBUG00000014201	-	84	76.503	Eptatretus_burgeri
ENSMPUG00000006545	SND1	100	96.976	ENSEASG00005008513	SND1	100	96.976	Equus_asinus_asinus
ENSMPUG00000006545	SND1	100	98.571	ENSECAG00000011451	SND1	100	98.571	Equus_caballus
ENSMPUG00000006545	SND1	100	86.593	ENSEEUG00000014737	SND1	100	86.593	Erinaceus_europaeus
ENSMPUG00000006545	SND1	99	81.469	ENSELUG00000001805	snd1	96	81.908	Esox_lucius
ENSMPUG00000006545	SND1	100	98.901	ENSFCAG00000008289	SND1	100	98.901	Felis_catus
ENSMPUG00000006545	SND1	100	97.912	ENSFDAG00000015881	SND1	100	97.912	Fukomys_damarensis
ENSMPUG00000006545	SND1	99	81.985	ENSFHEG00000004093	snd1	99	83.697	Fundulus_heteroclitus
ENSMPUG00000006545	SND1	64	74.011	ENSGMOG00000018932	snd1	66	74.011	Gadus_morhua
ENSMPUG00000006545	SND1	100	83.882	ENSGAFG00000008421	snd1	100	84.320	Gambusia_affinis
ENSMPUG00000006545	SND1	100	53.780	ENSGACG00000019793	snd1	100	53.780	Gasterosteus_aculeatus
ENSMPUG00000006545	SND1	100	98.571	ENSGGOG00000009614	SND1	100	98.571	Gorilla_gorilla
ENSMPUG00000006545	SND1	99	83.370	ENSHBUG00000019135	snd1	99	83.370	Haplochromis_burtoni
ENSMPUG00000006545	SND1	100	97.582	ENSHGLG00000003618	SND1	100	97.582	Heterocephalus_glaber_female
ENSMPUG00000006545	SND1	99	97.127	ENSHGLG00100012449	SND1	100	97.127	Heterocephalus_glaber_male
ENSMPUG00000006545	SND1	100	82.675	ENSHCOG00000005266	snd1	100	82.675	Hippocampus_comes
ENSMPUG00000006545	SND1	100	82.604	ENSIPUG00000013279	snd1	100	82.604	Ictalurus_punctatus
ENSMPUG00000006545	SND1	100	98.571	ENSSTOG00000002140	SND1	100	98.571	Ictidomys_tridecemlineatus
ENSMPUG00000006545	SND1	100	98.791	ENSJJAG00000009561	Snd1	100	98.791	Jaculus_jaculus
ENSMPUG00000006545	SND1	100	83.443	ENSKMAG00000016997	snd1	100	83.882	Kryptolebias_marmoratus
ENSMPUG00000006545	SND1	100	84.732	ENSLBEG00000013563	snd1	100	82.456	Labrus_bergylta
ENSMPUG00000006545	SND1	99	85.226	ENSLOCG00000015537	snd1	100	84.473	Lepisosteus_oculatus
ENSMPUG00000006545	SND1	100	97.582	ENSLAFG00000009696	SND1	100	97.582	Loxodonta_africana
ENSMPUG00000006545	SND1	100	98.571	ENSMFAG00000038114	SND1	100	98.571	Macaca_fascicularis
ENSMPUG00000006545	SND1	100	98.571	ENSMMUG00000015432	SND1	100	98.571	Macaca_mulatta
ENSMPUG00000006545	SND1	100	98.571	ENSMNEG00000039808	SND1	100	98.757	Macaca_nemestrina
ENSMPUG00000006545	SND1	100	98.462	ENSMLEG00000029040	SND1	100	98.644	Mandrillus_leucophaeus
ENSMPUG00000006545	SND1	100	83.461	ENSMAMG00000011739	snd1	100	83.461	Mastacembelus_armatus
ENSMPUG00000006545	SND1	100	83.333	ENSMZEG00005005681	snd1	100	83.333	Maylandia_zebra
ENSMPUG00000006545	SND1	100	98.352	ENSMICG00000000097	SND1	100	98.352	Microcebus_murinus
ENSMPUG00000006545	SND1	100	97.912	ENSMOCG00000005040	Snd1	100	97.912	Microtus_ochrogaster
ENSMPUG00000006545	SND1	100	82.895	ENSMMOG00000001795	snd1	100	83.333	Mola_mola
ENSMPUG00000006545	SND1	99	95.429	ENSMODG00000015182	SND1	100	95.275	Monodelphis_domestica
ENSMPUG00000006545	SND1	100	83.224	ENSMALG00000012071	snd1	100	83.224	Monopterus_albus
ENSMPUG00000006545	SND1	100	97.582	MGP_CAROLIEiJ_G0028159	Snd1	100	97.582	Mus_caroli
ENSMPUG00000006545	SND1	100	97.363	ENSMUSG00000001424	Snd1	100	97.363	Mus_musculus
ENSMPUG00000006545	SND1	100	97.582	MGP_PahariEiJ_G0021917	Snd1	100	97.808	Mus_pahari
ENSMPUG00000006545	SND1	100	97.582	MGP_SPRETEiJ_G0029159	Snd1	100	97.582	Mus_spretus
ENSMPUG00000006545	SND1	97	96.872	ENSMLUG00000017130	SND1	99	96.872	Myotis_lucifugus
ENSMPUG00000006545	SND1	100	97.912	ENSNGAG00000011186	Snd1	100	97.912	Nannospalax_galili
ENSMPUG00000006545	SND1	100	83.224	ENSNBRG00000006681	snd1	100	83.224	Neolamprologus_brichardi
ENSMPUG00000006545	SND1	100	98.462	ENSNLEG00000012263	SND1	100	98.757	Nomascus_leucogenys
ENSMPUG00000006545	SND1	91	100.000	ENSOPRG00000013405	SND1	92	100.000	Ochotona_princeps
ENSMPUG00000006545	SND1	100	97.912	ENSODEG00000011502	SND1	100	97.912	Octodon_degus
ENSMPUG00000006545	SND1	100	83.224	ENSONIG00000011481	snd1	97	83.224	Oreochromis_niloticus
ENSMPUG00000006545	SND1	98	93.581	ENSOANG00000000817	SND1	99	93.062	Ornithorhynchus_anatinus
ENSMPUG00000006545	SND1	100	97.033	ENSOCUG00000001620	SND1	100	97.033	Oryctolagus_cuniculus
ENSMPUG00000006545	SND1	98	83.799	ENSORLG00000015201	snd1	100	82.785	Oryzias_latipes
ENSMPUG00000006545	SND1	98	83.911	ENSORLG00020013991	snd1	100	82.895	Oryzias_latipes_hni
ENSMPUG00000006545	SND1	98	83.911	ENSORLG00015012436	snd1	100	82.895	Oryzias_latipes_hsok
ENSMPUG00000006545	SND1	100	83.114	ENSOMEG00000006406	snd1	100	83.114	Oryzias_melastigma
ENSMPUG00000006545	SND1	100	98.136	ENSOGAG00000013356	SND1	94	98.136	Otolemur_garnettii
ENSMPUG00000006545	SND1	97	96.045	ENSOARG00000002149	SND1	100	96.045	Ovis_aries
ENSMPUG00000006545	SND1	100	98.462	ENSPPAG00000042947	SND1	100	98.462	Pan_paniscus
ENSMPUG00000006545	SND1	100	98.901	ENSPPRG00000004494	SND1	100	98.901	Panthera_pardus
ENSMPUG00000006545	SND1	100	98.791	ENSPTIG00000014214	SND1	100	98.791	Panthera_tigris_altaica
ENSMPUG00000006545	SND1	100	98.462	ENSPTRG00000023911	SND1	100	98.462	Pan_troglodytes
ENSMPUG00000006545	SND1	97	98.756	ENSPANG00000011997	SND1	99	98.756	Papio_anubis
ENSMPUG00000006545	SND1	98	81.798	ENSPKIG00000023494	snd1	100	80.740	Paramormyrops_kingsleyae
ENSMPUG00000006545	SND1	92	82.874	ENSPMGG00000003629	snd1	100	82.874	Periophthalmus_magnuspinnatus
ENSMPUG00000006545	SND1	100	97.912	ENSPEMG00000010240	Snd1	100	97.912	Peromyscus_maniculatus_bairdii
ENSMPUG00000006545	SND1	97	73.785	ENSPMAG00000007915	-	99	73.785	Petromyzon_marinus
ENSMPUG00000006545	SND1	99	95.875	ENSPCIG00000011561	SND1	100	95.714	Phascolarctos_cinereus
ENSMPUG00000006545	SND1	100	83.333	ENSPFOG00000001557	snd1	100	83.772	Poecilia_formosa
ENSMPUG00000006545	SND1	100	83.443	ENSPLAG00000018459	snd1	97	83.882	Poecilia_latipinna
ENSMPUG00000006545	SND1	100	83.772	ENSPMEG00000006803	snd1	100	84.211	Poecilia_mexicana
ENSMPUG00000006545	SND1	100	83.662	ENSPREG00000002189	snd1	100	84.101	Poecilia_reticulata
ENSMPUG00000006545	SND1	93	98.263	ENSPPYG00000017972	SND1	100	98.263	Pongo_abelii
ENSMPUG00000006545	SND1	100	85.385	ENSPCAG00000011305	SND1	100	85.934	Procavia_capensis
ENSMPUG00000006545	SND1	100	98.352	ENSPCOG00000026791	SND1	100	98.531	Propithecus_coquereli
ENSMPUG00000006545	SND1	100	96.484	ENSPVAG00000013945	SND1	100	96.484	Pteropus_vampyrus
ENSMPUG00000006545	SND1	100	83.333	ENSPNYG00000000932	snd1	100	83.333	Pundamilia_nyererei
ENSMPUG00000006545	SND1	100	83.589	ENSPNAG00000001206	snd1	100	83.589	Pygocentrus_nattereri
ENSMPUG00000006545	SND1	99	97.247	ENSRNOG00000031173	Snd1	100	96.271	Rattus_norvegicus
ENSMPUG00000006545	SND1	76	95.691	ENSRBIG00000027782	-	93	99.430	Rhinopithecus_bieti
ENSMPUG00000006545	SND1	100	98.571	ENSRROG00000033020	SND1	100	98.571	Rhinopithecus_roxellana
ENSMPUG00000006545	SND1	100	98.571	ENSSBOG00000032461	SND1	100	98.571	Saimiri_boliviensis_boliviensis
ENSMPUG00000006545	SND1	98	92.680	ENSSHAG00000015359	SND1	100	92.680	Sarcophilus_harrisii
ENSMPUG00000006545	SND1	100	82.372	ENSSFOG00015001103	snd1	100	82.372	Scleropages_formosus
ENSMPUG00000006545	SND1	98	83.669	ENSSMAG00000001932	snd1	95	82.566	Scophthalmus_maximus
ENSMPUG00000006545	SND1	100	83.553	ENSSDUG00000002699	snd1	94	83.553	Seriola_dumerili
ENSMPUG00000006545	SND1	100	76.425	ENSSLDG00000001950	snd1	100	76.425	Seriola_lalandi_dorsalis
ENSMPUG00000006545	SND1	86	99.057	ENSSARG00000004877	SND1	92	99.057	Sorex_araneus
ENSMPUG00000006545	SND1	73	88.000	ENSSPUG00000017586	SND1	96	88.000	Sphenodon_punctatus
ENSMPUG00000006545	SND1	73	84.941	ENSSPAG00000021398	snd1	99	84.941	Stegastes_partitus
ENSMPUG00000006545	SND1	100	98.352	ENSSSCG00000016590	SND1	100	98.352	Sus_scrofa
ENSMPUG00000006545	SND1	100	82.456	ENSTRUG00000014067	snd1	100	82.456	Takifugu_rubripes
ENSMPUG00000006545	SND1	100	83.114	ENSTNIG00000011019	snd1	98	85.595	Tetraodon_nigroviridis
ENSMPUG00000006545	SND1	93	93.042	ENSTBEG00000003999	SND1	100	93.042	Tupaia_belangeri
ENSMPUG00000006545	SND1	100	93.956	ENSTTRG00000006059	SND1	100	93.956	Tursiops_truncatus
ENSMPUG00000006545	SND1	71	89.870	ENSUAMG00000002820	-	90	89.870	Ursus_americanus
ENSMPUG00000006545	SND1	91	98.669	ENSUAMG00000005604	-	93	98.669	Ursus_americanus
ENSMPUG00000006545	SND1	100	98.681	ENSUMAG00000005960	SND1	100	98.681	Ursus_maritimus
ENSMPUG00000006545	SND1	77	100.000	ENSVPAG00000008302	SND1	74	100.000	Vicugna_pacos
ENSMPUG00000006545	SND1	100	98.571	ENSVVUG00000007226	SND1	100	98.571	Vulpes_vulpes
ENSMPUG00000006545	SND1	97	84.181	ENSXETG00000023043	snd1	100	84.783	Xenopus_tropicalis
ENSMPUG00000006545	SND1	92	80.879	ENSXCOG00000013629	snd1	99	81.354	Xiphophorus_couchianus
ENSMPUG00000006545	SND1	100	83.882	ENSXMAG00000011469	snd1	100	84.320	Xiphophorus_maculatus