EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMPUG00000006936 (Gene tree)
Gene ID: 101683577
Gene Symbol: LSM6
Alias: YDR378C
Full Name: LSM6 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type: protein_coding
Species: Mustela_putorius_furo
Status: putative
Strand: Plus strand
Length: 5697 bases
Position: chrGL896960.1:1944256-1949952
Accession: 17017
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMPUP00000006881	LSM	PF01423.22	1.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMPUT00000006995	LSM6-201	258	-	ENSMPUP00000006881	86 (aa)	-	G9K8Y3

Gene Model

Click here to download ENSMPUG00000006936's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMPUG00000006936's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMPUG00000006936	LSM6	77	51.515	ENSMPUG00000007176	-	59	51.515

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMPUG00000006936	LSM6	92	100.000	ENSG00000164167	LSM6	99	100.000	Homo_sapiens
ENSMPUG00000006936	LSM6	92	96.203	ENSAPOG00000019832	lsm6	99	96.203	Acanthochromis_polyacanthus
ENSMPUG00000006936	LSM6	92	100.000	ENSAMEG00000016671	LSM6	99	100.000	Ailuropoda_melanoleuca
ENSMPUG00000006936	LSM6	92	96.203	ENSACIG00000016711	lsm6	99	96.203	Amphilophus_citrinellus
ENSMPUG00000006936	LSM6	94	96.296	ENSAOCG00000002110	lsm6	52	96.296	Amphiprion_ocellaris
ENSMPUG00000006936	LSM6	92	96.203	ENSAPEG00000023992	lsm6	99	96.203	Amphiprion_percula
ENSMPUG00000006936	LSM6	92	96.203	ENSATEG00000012610	lsm6	99	96.203	Anabas_testudineus
ENSMPUG00000006936	LSM6	88	100.000	ENSAPLG00000012594	LSM6	97	100.000	Anas_platyrhynchos
ENSMPUG00000006936	LSM6	92	100.000	ENSACAG00000004004	LSM6	99	100.000	Anolis_carolinensis
ENSMPUG00000006936	LSM6	92	100.000	ENSANAG00000030568	-	99	100.000	Aotus_nancymaae
ENSMPUG00000006936	LSM6	92	86.076	ENSANAG00000021839	-	99	86.076	Aotus_nancymaae
ENSMPUG00000006936	LSM6	92	96.203	ENSACLG00000025621	lsm6	99	96.203	Astatotilapia_calliptera
ENSMPUG00000006936	LSM6	95	95.122	ENSAMXG00000038738	lsm6	99	96.203	Astyanax_mexicanus
ENSMPUG00000006936	LSM6	100	97.674	ENSBTAG00000014060	LSM6	99	100.000	Bos_taurus
ENSMPUG00000006936	LSM6	92	93.671	ENSBTAG00000052085	-	99	93.671	Bos_taurus
ENSMPUG00000006936	LSM6	87	81.333	WBGene00003080	lsm-6	97	81.333	Caenorhabditis_elegans
ENSMPUG00000006936	LSM6	92	100.000	ENSCJAG00000002482	LSM6	99	100.000	Callithrix_jacchus
ENSMPUG00000006936	LSM6	92	100.000	ENSCAFG00000007738	LSM6	99	100.000	Canis_familiaris
ENSMPUG00000006936	LSM6	92	100.000	ENSCAFG00020025902	LSM6	99	100.000	Canis_lupus_dingo
ENSMPUG00000006936	LSM6	92	100.000	ENSCHIG00000010334	-	99	100.000	Capra_hircus
ENSMPUG00000006936	LSM6	83	100.000	ENSCHIG00000012864	-	100	100.000	Capra_hircus
ENSMPUG00000006936	LSM6	95	84.146	ENSCHIG00000024198	-	97	84.146	Capra_hircus
ENSMPUG00000006936	LSM6	92	100.000	ENSTSYG00000026972	LSM6	99	100.000	Carlito_syrichta
ENSMPUG00000006936	LSM6	74	92.188	ENSTSYG00000012759	-	84	92.188	Carlito_syrichta
ENSMPUG00000006936	LSM6	92	100.000	ENSCAPG00000008104	LSM6	99	100.000	Cavia_aperea
ENSMPUG00000006936	LSM6	76	96.923	ENSCAPG00000011179	-	100	96.923	Cavia_aperea
ENSMPUG00000006936	LSM6	92	100.000	ENSCPOG00000032655	LSM6	99	100.000	Cavia_porcellus
ENSMPUG00000006936	LSM6	92	100.000	ENSCCAG00000036437	LSM6	99	100.000	Cebus_capucinus
ENSMPUG00000006936	LSM6	92	98.734	ENSCCAG00000020665	-	99	98.734	Cebus_capucinus
ENSMPUG00000006936	LSM6	92	100.000	ENSCATG00000002770	-	99	100.000	Cercocebus_atys
ENSMPUG00000006936	LSM6	92	72.152	ENSCATG00000038799	-	99	72.152	Cercocebus_atys
ENSMPUG00000006936	LSM6	92	100.000	ENSCLAG00000005495	LSM6	99	100.000	Chinchilla_lanigera
ENSMPUG00000006936	LSM6	83	80.282	ENSCLAG00000005685	-	100	80.282	Chinchilla_lanigera
ENSMPUG00000006936	LSM6	92	100.000	ENSCSAG00000003421	LSM6	99	100.000	Chlorocebus_sabaeus
ENSMPUG00000006936	LSM6	92	78.481	ENSCHOG00000003420	LSM6	98	78.481	Choloepus_hoffmanni
ENSMPUG00000006936	LSM6	98	96.429	ENSCPBG00000027472	LSM6	88	96.429	Chrysemys_picta_bellii
ENSMPUG00000006936	LSM6	88	96.053	ENSCING00000019152	-	93	96.053	Ciona_intestinalis
ENSMPUG00000006936	LSM6	88	97.368	ENSCSAVG00000002065	-	93	97.368	Ciona_savignyi
ENSMPUG00000006936	LSM6	92	100.000	ENSCANG00000006849	-	99	100.000	Colobus_angolensis_palliatus
ENSMPUG00000006936	LSM6	92	70.886	ENSCANG00000035214	-	99	70.886	Colobus_angolensis_palliatus
ENSMPUG00000006936	LSM6	92	100.000	ENSCANG00000041263	-	99	100.000	Colobus_angolensis_palliatus
ENSMPUG00000006936	LSM6	92	100.000	ENSCGRG00001017142	Lsm6	99	100.000	Cricetulus_griseus_chok1gshd
ENSMPUG00000006936	LSM6	92	100.000	ENSCGRG00000008320	Lsm6	99	100.000	Cricetulus_griseus_crigri
ENSMPUG00000006936	LSM6	95	93.902	ENSCSEG00000000423	lsm6	99	96.203	Cynoglossus_semilaevis
ENSMPUG00000006936	LSM6	92	96.203	ENSCVAG00000001592	lsm6	99	96.203	Cyprinodon_variegatus
ENSMPUG00000006936	LSM6	92	96.203	ENSDARG00000036995	lsm6	99	96.203	Danio_rerio
ENSMPUG00000006936	LSM6	92	98.734	ENSDNOG00000044848	-	99	98.734	Dasypus_novemcinctus
ENSMPUG00000006936	LSM6	91	90.000	ENSDNOG00000040186	-	86	90.000	Dasypus_novemcinctus
ENSMPUG00000006936	LSM6	92	100.000	ENSDORG00000000933	Lsm6	99	100.000	Dipodomys_ordii
ENSMPUG00000006936	LSM6	88	86.842	FBgn0034564	CG9344	96	86.842	Drosophila_melanogaster
ENSMPUG00000006936	LSM6	55	100.000	ENSETEG00000013098	LSM6	98	100.000	Echinops_telfairi
ENSMPUG00000006936	LSM6	92	100.000	ENSEBUG00000017073	lsm6	99	100.000	Eptatretus_burgeri
ENSMPUG00000006936	LSM6	80	100.000	ENSEASG00005001533	LSM6	72	100.000	Equus_asinus_asinus
ENSMPUG00000006936	LSM6	92	100.000	ENSECAG00000021036	LSM6	99	100.000	Equus_caballus
ENSMPUG00000006936	LSM6	91	71.795	ENSEEUG00000002101	LSM6	99	71.795	Erinaceus_europaeus
ENSMPUG00000006936	LSM6	92	96.203	ENSELUG00000014301	LSM6	99	96.203	Esox_lucius
ENSMPUG00000006936	LSM6	92	100.000	ENSFCAG00000003047	LSM6	99	100.000	Felis_catus
ENSMPUG00000006936	LSM6	94	98.765	ENSFALG00000005509	LSM6	93	98.765	Ficedula_albicollis
ENSMPUG00000006936	LSM6	92	100.000	ENSFDAG00000020913	-	99	100.000	Fukomys_damarensis
ENSMPUG00000006936	LSM6	92	88.608	ENSFDAG00000019073	-	99	88.608	Fukomys_damarensis
ENSMPUG00000006936	LSM6	92	96.203	ENSFHEG00000007948	lsm6	99	96.203	Fundulus_heteroclitus
ENSMPUG00000006936	LSM6	92	96.203	ENSGMOG00000015550	lsm6	99	96.203	Gadus_morhua
ENSMPUG00000006936	LSM6	92	100.000	ENSGALG00000009985	LSM6	99	100.000	Gallus_gallus
ENSMPUG00000006936	LSM6	92	96.203	ENSGAFG00000017763	lsm6	99	96.203	Gambusia_affinis
ENSMPUG00000006936	LSM6	92	96.203	ENSGACG00000017223	lsm6	99	96.203	Gasterosteus_aculeatus
ENSMPUG00000006936	LSM6	92	100.000	ENSGAGG00000020980	LSM6	99	100.000	Gopherus_agassizii
ENSMPUG00000006936	LSM6	92	100.000	ENSGGOG00000001310	LSM6	99	100.000	Gorilla_gorilla
ENSMPUG00000006936	LSM6	92	96.203	ENSHBUG00000008618	lsm6	99	96.203	Haplochromis_burtoni
ENSMPUG00000006936	LSM6	92	100.000	ENSHGLG00000000205	LSM6	99	100.000	Heterocephalus_glaber_female
ENSMPUG00000006936	LSM6	92	100.000	ENSHGLG00100014341	LSM6	99	100.000	Heterocephalus_glaber_male
ENSMPUG00000006936	LSM6	92	96.203	ENSHCOG00000005591	lsm6	99	96.203	Hippocampus_comes
ENSMPUG00000006936	LSM6	92	94.937	ENSIPUG00000004508	lsm6	99	94.937	Ictalurus_punctatus
ENSMPUG00000006936	LSM6	92	100.000	ENSSTOG00000002678	LSM6	99	100.000	Ictidomys_tridecemlineatus
ENSMPUG00000006936	LSM6	92	89.873	ENSJJAG00000011211	-	99	89.873	Jaculus_jaculus
ENSMPUG00000006936	LSM6	92	100.000	ENSJJAG00000013845	-	99	100.000	Jaculus_jaculus
ENSMPUG00000006936	LSM6	88	78.947	ENSJJAG00000016942	-	96	78.947	Jaculus_jaculus
ENSMPUG00000006936	LSM6	92	96.203	ENSKMAG00000004105	lsm6	99	96.203	Kryptolebias_marmoratus
ENSMPUG00000006936	LSM6	92	96.203	ENSLBEG00000018441	lsm6	99	96.203	Labrus_bergylta
ENSMPUG00000006936	LSM6	92	100.000	ENSLACG00000006937	LSM6	99	100.000	Latimeria_chalumnae
ENSMPUG00000006936	LSM6	92	94.937	ENSLOCG00000017683	-	99	94.937	Lepisosteus_oculatus
ENSMPUG00000006936	LSM6	92	96.203	ENSLOCG00000008852	lsm6	99	96.203	Lepisosteus_oculatus
ENSMPUG00000006936	LSM6	92	100.000	ENSLAFG00000001952	LSM6	99	100.000	Loxodonta_africana
ENSMPUG00000006936	LSM6	92	100.000	ENSMFAG00000033073	LSM6	99	100.000	Macaca_fascicularis
ENSMPUG00000006936	LSM6	92	73.418	ENSMNEG00000040412	-	99	73.418	Macaca_nemestrina
ENSMPUG00000006936	LSM6	92	100.000	ENSMNEG00000034820	-	99	100.000	Macaca_nemestrina
ENSMPUG00000006936	LSM6	92	100.000	ENSMLEG00000035153	LSM6	99	100.000	Mandrillus_leucophaeus
ENSMPUG00000006936	LSM6	92	96.203	ENSMAMG00000014029	lsm6	99	96.203	Mastacembelus_armatus
ENSMPUG00000006936	LSM6	92	96.203	ENSMZEG00005009146	lsm6	99	96.203	Maylandia_zebra
ENSMPUG00000006936	LSM6	92	100.000	ENSMGAG00000003802	LSM6	99	100.000	Meleagris_gallopavo
ENSMPUG00000006936	LSM6	92	100.000	ENSMAUG00000014938	Lsm6	99	100.000	Mesocricetus_auratus
ENSMPUG00000006936	LSM6	92	100.000	ENSMICG00000042599	LSM6	99	100.000	Microcebus_murinus
ENSMPUG00000006936	LSM6	91	91.026	ENSMICG00000047411	-	92	91.026	Microcebus_murinus
ENSMPUG00000006936	LSM6	92	100.000	ENSMOCG00000020049	Lsm6	99	100.000	Microtus_ochrogaster
ENSMPUG00000006936	LSM6	92	89.873	ENSMMOG00000007379	-	99	89.873	Mola_mola
ENSMPUG00000006936	LSM6	92	96.203	ENSMMOG00000005470	lsm6	99	96.203	Mola_mola
ENSMPUG00000006936	LSM6	92	100.000	ENSMODG00000000526	LSM6	99	100.000	Monodelphis_domestica
ENSMPUG00000006936	LSM6	92	96.203	ENSMALG00000002419	lsm6	99	96.203	Monopterus_albus
ENSMPUG00000006936	LSM6	92	100.000	MGP_CAROLIEiJ_G0031245	Lsm6	99	100.000	Mus_caroli
ENSMPUG00000006936	LSM6	92	100.000	ENSMUSG00000031683	Lsm6	99	100.000	Mus_musculus
ENSMPUG00000006936	LSM6	92	100.000	MGP_PahariEiJ_G0022851	Lsm6	99	100.000	Mus_pahari
ENSMPUG00000006936	LSM6	92	100.000	MGP_SPRETEiJ_G0032365	Lsm6	99	100.000	Mus_spretus
ENSMPUG00000006936	LSM6	92	100.000	ENSMLUG00000026355	LSM6	99	100.000	Myotis_lucifugus
ENSMPUG00000006936	LSM6	92	100.000	ENSNGAG00000019116	Lsm6	99	100.000	Nannospalax_galili
ENSMPUG00000006936	LSM6	92	96.203	ENSNBRG00000004887	lsm6	99	96.203	Neolamprologus_brichardi
ENSMPUG00000006936	LSM6	92	100.000	ENSNLEG00000005584	LSM6	99	100.000	Nomascus_leucogenys
ENSMPUG00000006936	LSM6	92	98.734	ENSOPRG00000011199	LSM6	99	98.734	Ochotona_princeps
ENSMPUG00000006936	LSM6	92	96.203	ENSODEG00000019419	-	99	96.203	Octodon_degus
ENSMPUG00000006936	LSM6	92	98.734	ENSODEG00000002307	-	99	98.734	Octodon_degus
ENSMPUG00000006936	LSM6	92	97.468	ENSODEG00000020420	-	99	97.468	Octodon_degus
ENSMPUG00000006936	LSM6	90	88.312	ENSODEG00000018684	-	100	88.312	Octodon_degus
ENSMPUG00000006936	LSM6	92	96.203	ENSONIG00000010005	lsm6	99	96.203	Oreochromis_niloticus
ENSMPUG00000006936	LSM6	90	74.026	ENSOANG00000006895	-	99	74.026	Ornithorhynchus_anatinus
ENSMPUG00000006936	LSM6	90	74.026	ENSOANG00000006894	-	99	74.026	Ornithorhynchus_anatinus
ENSMPUG00000006936	LSM6	92	94.937	ENSORLG00000024158	lsm6	99	94.937	Oryzias_latipes
ENSMPUG00000006936	LSM6	92	94.937	ENSORLG00020017383	lsm6	99	94.937	Oryzias_latipes_hni
ENSMPUG00000006936	LSM6	92	94.937	ENSORLG00015016903	lsm6	99	94.937	Oryzias_latipes_hsok
ENSMPUG00000006936	LSM6	92	96.203	ENSOMEG00000000074	lsm6	99	96.203	Oryzias_melastigma
ENSMPUG00000006936	LSM6	92	100.000	ENSOGAG00000026665	-	99	100.000	Otolemur_garnettii
ENSMPUG00000006936	LSM6	92	100.000	ENSOGAG00000033153	-	99	100.000	Otolemur_garnettii
ENSMPUG00000006936	LSM6	100	93.023	ENSOARG00000011641	-	100	93.023	Ovis_aries
ENSMPUG00000006936	LSM6	80	100.000	ENSOARG00000008509	-	88	100.000	Ovis_aries
ENSMPUG00000006936	LSM6	92	100.000	ENSPPAG00000037929	LSM6	99	100.000	Pan_paniscus
ENSMPUG00000006936	LSM6	92	100.000	ENSPPRG00000012806	LSM6	99	100.000	Panthera_pardus
ENSMPUG00000006936	LSM6	92	100.000	ENSPTIG00000019769	LSM6	99	100.000	Panthera_tigris_altaica
ENSMPUG00000006936	LSM6	92	100.000	ENSPTRG00000016488	LSM6	99	100.000	Pan_troglodytes
ENSMPUG00000006936	LSM6	92	100.000	ENSPANG00000006552	LSM6	99	100.000	Papio_anubis
ENSMPUG00000006936	LSM6	92	96.203	ENSPKIG00000016176	lsm6	99	96.203	Paramormyrops_kingsleyae
ENSMPUG00000006936	LSM6	92	100.000	ENSPSIG00000016942	LSM6	99	100.000	Pelodiscus_sinensis
ENSMPUG00000006936	LSM6	92	96.203	ENSPMGG00000018004	lsm6	99	96.203	Periophthalmus_magnuspinnatus
ENSMPUG00000006936	LSM6	92	100.000	ENSPEMG00000012410	Lsm6	99	100.000	Peromyscus_maniculatus_bairdii
ENSMPUG00000006936	LSM6	92	100.000	ENSPMAG00000006949	lsm6	99	100.000	Petromyzon_marinus
ENSMPUG00000006936	LSM6	97	97.590	ENSPCIG00000023469	LSM6	80	100.000	Phascolarctos_cinereus
ENSMPUG00000006936	LSM6	92	96.203	ENSPFOG00000008881	lsm6	99	96.203	Poecilia_formosa
ENSMPUG00000006936	LSM6	92	96.203	ENSPLAG00000003202	lsm6	99	96.203	Poecilia_latipinna
ENSMPUG00000006936	LSM6	92	96.203	ENSPMEG00000004000	lsm6	99	96.203	Poecilia_mexicana
ENSMPUG00000006936	LSM6	92	96.203	ENSPREG00000023235	lsm6	99	96.203	Poecilia_reticulata
ENSMPUG00000006936	LSM6	92	100.000	ENSPPYG00000015105	LSM6	99	100.000	Pongo_abelii
ENSMPUG00000006936	LSM6	92	100.000	ENSPCOG00000013899	LSM6	99	100.000	Propithecus_coquereli
ENSMPUG00000006936	LSM6	92	96.203	ENSPNYG00000012614	lsm6	99	96.203	Pundamilia_nyererei
ENSMPUG00000006936	LSM6	92	96.203	ENSPNAG00000018779	lsm6	99	96.203	Pygocentrus_nattereri
ENSMPUG00000006936	LSM6	92	100.000	ENSRNOG00000030374	Lsm6	99	100.000	Rattus_norvegicus
ENSMPUG00000006936	LSM6	92	100.000	ENSRNOG00000049370	LOC100360750	99	100.000	Rattus_norvegicus
ENSMPUG00000006936	LSM6	92	100.000	ENSRBIG00000027878	LSM6	99	100.000	Rhinopithecus_bieti
ENSMPUG00000006936	LSM6	92	100.000	ENSRROG00000024868	LSM6	99	100.000	Rhinopithecus_roxellana
ENSMPUG00000006936	LSM6	91	41.463	YDR378C	-	95	45.122	Saccharomyces_cerevisiae
ENSMPUG00000006936	LSM6	92	100.000	ENSSBOG00000021229	-	99	100.000	Saimiri_boliviensis_boliviensis
ENSMPUG00000006936	LSM6	92	73.418	ENSSBOG00000028103	-	99	73.418	Saimiri_boliviensis_boliviensis
ENSMPUG00000006936	LSM6	92	96.203	ENSSFOG00015016480	lsm6	99	96.203	Scleropages_formosus
ENSMPUG00000006936	LSM6	92	96.203	ENSSMAG00000004550	lsm6	99	96.203	Scophthalmus_maximus
ENSMPUG00000006936	LSM6	94	96.296	ENSSDUG00000020459	lsm6	50	96.296	Seriola_dumerili
ENSMPUG00000006936	LSM6	80	97.101	ENSSLDG00000004136	-	59	97.101	Seriola_lalandi_dorsalis
ENSMPUG00000006936	LSM6	94	96.296	ENSSLDG00000020533	lsm6	84	96.296	Seriola_lalandi_dorsalis
ENSMPUG00000006936	LSM6	55	100.000	ENSSARG00000000689	LSM6	98	100.000	Sorex_araneus
ENSMPUG00000006936	LSM6	92	100.000	ENSSPUG00000008657	LSM6	99	100.000	Sphenodon_punctatus
ENSMPUG00000006936	LSM6	92	96.203	ENSSPAG00000003246	lsm6	99	96.203	Stegastes_partitus
ENSMPUG00000006936	LSM6	92	100.000	ENSSSCG00000035973	LSM6	99	100.000	Sus_scrofa
ENSMPUG00000006936	LSM6	92	100.000	ENSTGUG00000002663	LSM6	99	100.000	Taeniopygia_guttata
ENSMPUG00000006936	LSM6	92	96.203	ENSTRUG00000023398	lsm6	99	96.203	Takifugu_rubripes
ENSMPUG00000006936	LSM6	92	96.203	ENSTNIG00000017725	lsm6	99	96.203	Tetraodon_nigroviridis
ENSMPUG00000006936	LSM6	92	100.000	ENSTTRG00000004609	LSM6	99	100.000	Tursiops_truncatus
ENSMPUG00000006936	LSM6	91	91.026	ENSUAMG00000014213	LSM6	64	91.026	Ursus_americanus
ENSMPUG00000006936	LSM6	91	91.026	ENSUMAG00000015727	LSM6	64	91.026	Ursus_maritimus
ENSMPUG00000006936	LSM6	92	100.000	ENSVPAG00000006922	LSM6	99	100.000	Vicugna_pacos
ENSMPUG00000006936	LSM6	100	100.000	ENSVVUG00000009254	LSM6	74	100.000	Vulpes_vulpes
ENSMPUG00000006936	LSM6	92	100.000	ENSXETG00000023683	lsm6	99	100.000	Xenopus_tropicalis
ENSMPUG00000006936	LSM6	92	96.203	ENSXMAG00000009606	lsm6	99	96.203	Xiphophorus_maculatus