EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMPUG00000008949 (Gene tree)
Gene ID: 101673924
Gene Symbol: SNRNP200
Alias: ASCC3L1|BRR2|HELIC2|KIAA0788|RP33|U5-200KD
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Mustela_putorius_furo
Status: putative
Strand: Plus strand
Length: 29995 bases
Position: chrGL897058.1:2514597-2544591
Accession: 101673924
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMPUP00000008879	ResIII	PF04851.15	4.4e-26	1	2
ENSMPUP00000008879	ResIII	PF04851.15	4.4e-26	2	2
ENSMPUP00000008879	DEAD	PF00270.29	2.6e-52	1	2
ENSMPUP00000008879	DEAD	PF00270.29	2.6e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMPUT00000009023	SNRNP200-201	7213	XM_004770928	ENSMPUP00000008879	2136 (aa)	XP_004770985	M3YC22

Gene Model

Click here to download ENSMPUG00000008949's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMPUG00000008949's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMPUG00000008949	SNRNP200	75	31.624	ENSMPUG00000004594	HFM1	56	31.624
ENSMPUG00000008949	SNRNP200	86	42.402	ENSMPUG00000001675	ASCC3	80	44.363

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMPUG00000008949	SNRNP200	100	99.813	ENSG00000144028	SNRNP200	100	99.813	Homo_sapiens
ENSMPUG00000008949	SNRNP200	99	90.982	ENSAPOG00000010223	snrnp200	99	90.871	Acanthochromis_polyacanthus
ENSMPUG00000008949	SNRNP200	100	99.860	ENSAMEG00000008996	SNRNP200	100	99.860	Ailuropoda_melanoleuca
ENSMPUG00000008949	SNRNP200	97	90.257	ENSACIG00000001764	snrnp200	98	90.257	Amphilophus_citrinellus
ENSMPUG00000008949	SNRNP200	99	90.888	ENSAOCG00000024593	snrnp200	100	90.043	Amphiprion_ocellaris
ENSMPUG00000008949	SNRNP200	97	90.096	ENSAPEG00000012554	snrnp200	100	90.096	Amphiprion_percula
ENSMPUG00000008949	SNRNP200	99	90.747	ENSATEG00000022522	snrnp200	99	90.637	Anabas_testudineus
ENSMPUG00000008949	SNRNP200	99	97.784	ENSAPLG00000004313	SNRNP200	100	97.784	Anas_platyrhynchos
ENSMPUG00000008949	SNRNP200	99	97.497	ENSACAG00000000434	SNRNP200	100	97.497	Anolis_carolinensis
ENSMPUG00000008949	SNRNP200	100	95.243	ENSANAG00000036625	SNRNP200	100	95.662	Aotus_nancymaae
ENSMPUG00000008949	SNRNP200	99	90.606	ENSACLG00000011188	snrnp200	99	90.496	Astatotilapia_calliptera
ENSMPUG00000008949	SNRNP200	99	90.606	ENSAMXG00000005684	snrnp200	99	90.496	Astyanax_mexicanus
ENSMPUG00000008949	SNRNP200	100	99.298	ENSBTAG00000000848	SNRNP200	100	99.298	Bos_taurus
ENSMPUG00000008949	SNRNP200	100	99.766	ENSCJAG00000007514	SNRNP200	100	99.766	Callithrix_jacchus
ENSMPUG00000008949	SNRNP200	100	99.067	ENSCAFG00020019979	SNRNP200	100	99.883	Canis_lupus_dingo
ENSMPUG00000008949	SNRNP200	100	99.485	ENSCHIG00000020611	SNRNP200	100	99.485	Capra_hircus
ENSMPUG00000008949	SNRNP200	100	99.813	ENSTSYG00000010467	SNRNP200	100	99.813	Carlito_syrichta
ENSMPUG00000008949	SNRNP200	99	99.342	ENSCAPG00000017234	SNRNP200	99	99.342	Cavia_aperea
ENSMPUG00000008949	SNRNP200	100	99.625	ENSCPOG00000006776	SNRNP200	100	99.625	Cavia_porcellus
ENSMPUG00000008949	SNRNP200	100	99.766	ENSCCAG00000033962	SNRNP200	100	99.766	Cebus_capucinus
ENSMPUG00000008949	SNRNP200	100	99.813	ENSCATG00000015790	SNRNP200	100	99.813	Cercocebus_atys
ENSMPUG00000008949	SNRNP200	100	99.579	ENSCLAG00000004116	SNRNP200	100	99.579	Chinchilla_lanigera
ENSMPUG00000008949	SNRNP200	100	99.766	ENSCSAG00000017369	SNRNP200	100	99.766	Chlorocebus_sabaeus
ENSMPUG00000008949	SNRNP200	75	99.213	ENSCHOG00000012981	-	59	99.213	Choloepus_hoffmanni
ENSMPUG00000008949	SNRNP200	100	97.849	ENSCPBG00000022571	SNRNP200	100	97.849	Chrysemys_picta_bellii
ENSMPUG00000008949	SNRNP200	99	76.646	ENSCING00000005082	-	99	76.787	Ciona_intestinalis
ENSMPUG00000008949	SNRNP200	100	94.302	ENSCANG00000033932	SNRNP200	100	99.751	Colobus_angolensis_palliatus
ENSMPUG00000008949	SNRNP200	100	99.672	ENSCGRG00001022610	Snrnp200	100	99.672	Cricetulus_griseus_chok1gshd
ENSMPUG00000008949	SNRNP200	100	99.112	ENSCGRG00000016472	Snrnp200	100	99.112	Cricetulus_griseus_crigri
ENSMPUG00000008949	SNRNP200	100	89.981	ENSCSEG00000016399	snrnp200	100	89.981	Cynoglossus_semilaevis
ENSMPUG00000008949	SNRNP200	100	85.721	ENSCVAG00000017631	snrnp200	99	85.721	Cyprinodon_variegatus
ENSMPUG00000008949	SNRNP200	100	90.449	ENSDARG00000077536	snrnp200	99	90.449	Danio_rerio
ENSMPUG00000008949	SNRNP200	100	98.268	ENSDNOG00000011227	SNRNP200	100	98.268	Dasypus_novemcinctus
ENSMPUG00000008949	SNRNP200	100	97.055	ENSDORG00000005861	Snrnp200	100	97.055	Dipodomys_ordii
ENSMPUG00000008949	SNRNP200	100	74.255	FBgn0263599	l(3)72Ab	99	74.162	Drosophila_melanogaster
ENSMPUG00000008949	SNRNP200	95	99.742	ENSETEG00000000162	SNRNP200	74	99.742	Echinops_telfairi
ENSMPUG00000008949	SNRNP200	83	81.435	ENSEBUG00000016524	snrnp200	95	81.435	Eptatretus_burgeri
ENSMPUG00000008949	SNRNP200	100	98.741	ENSEASG00005001884	SNRNP200	100	98.741	Equus_asinus_asinus
ENSMPUG00000008949	SNRNP200	100	99.860	ENSECAG00000019675	SNRNP200	100	99.860	Equus_caballus
ENSMPUG00000008949	SNRNP200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSMPUG00000008949	SNRNP200	99	90.935	ENSELUG00000018948	snrnp200	99	90.824	Esox_lucius
ENSMPUG00000008949	SNRNP200	100	99.906	ENSFCAG00000010699	SNRNP200	100	99.906	Felis_catus
ENSMPUG00000008949	SNRNP200	93	92.857	ENSFALG00000001368	-	95	92.857	Ficedula_albicollis
ENSMPUG00000008949	SNRNP200	100	99.532	ENSFDAG00000004683	SNRNP200	100	99.532	Fukomys_damarensis
ENSMPUG00000008949	SNRNP200	100	87.875	ENSFHEG00000003786	snrnp200	99	87.875	Fundulus_heteroclitus
ENSMPUG00000008949	SNRNP200	100	89.766	ENSGMOG00000004881	snrnp200	99	89.720	Gadus_morhua
ENSMPUG00000008949	SNRNP200	100	88.109	ENSGAFG00000010807	snrnp200	99	88.109	Gambusia_affinis
ENSMPUG00000008949	SNRNP200	100	90.098	ENSGACG00000011474	snrnp200	99	90.005	Gasterosteus_aculeatus
ENSMPUG00000008949	SNRNP200	95	97.789	ENSGAGG00000016069	SNRNP200	99	97.789	Gopherus_agassizii
ENSMPUG00000008949	SNRNP200	100	99.813	ENSGGOG00000005174	SNRNP200	100	99.813	Gorilla_gorilla
ENSMPUG00000008949	SNRNP200	97	87.780	ENSHBUG00000011322	snrnp200	99	87.827	Haplochromis_burtoni
ENSMPUG00000008949	SNRNP200	100	99.625	ENSHGLG00000006654	SNRNP200	100	99.625	Heterocephalus_glaber_female
ENSMPUG00000008949	SNRNP200	100	99.625	ENSHGLG00100018594	SNRNP200	100	99.625	Heterocephalus_glaber_male
ENSMPUG00000008949	SNRNP200	100	99.766	ENSSTOG00000016351	SNRNP200	100	99.766	Ictidomys_tridecemlineatus
ENSMPUG00000008949	SNRNP200	100	99.579	ENSJJAG00000023659	Snrnp200	100	99.579	Jaculus_jaculus
ENSMPUG00000008949	SNRNP200	100	87.634	ENSKMAG00000003665	snrnp200	99	87.634	Kryptolebias_marmoratus
ENSMPUG00000008949	SNRNP200	100	90.356	ENSLBEG00000021585	snrnp200	99	90.356	Labrus_bergylta
ENSMPUG00000008949	SNRNP200	82	94.836	ENSLACG00000000226	SNRNP200	99	94.836	Latimeria_chalumnae
ENSMPUG00000008949	SNRNP200	100	92.275	ENSLOCG00000015198	snrnp200	99	92.275	Lepisosteus_oculatus
ENSMPUG00000008949	SNRNP200	100	99.579	ENSLAFG00000015626	SNRNP200	100	99.579	Loxodonta_africana
ENSMPUG00000008949	SNRNP200	100	99.766	ENSMFAG00000040174	SNRNP200	100	99.766	Macaca_fascicularis
ENSMPUG00000008949	SNRNP200	100	99.766	ENSMMUG00000023261	SNRNP200	100	99.766	Macaca_mulatta
ENSMPUG00000008949	SNRNP200	100	99.719	ENSMNEG00000032398	SNRNP200	100	99.719	Macaca_nemestrina
ENSMPUG00000008949	SNRNP200	100	99.813	ENSMLEG00000019083	SNRNP200	100	99.813	Mandrillus_leucophaeus
ENSMPUG00000008949	SNRNP200	100	90.314	ENSMAMG00000007851	snrnp200	99	90.267	Mastacembelus_armatus
ENSMPUG00000008949	SNRNP200	97	87.780	ENSMZEG00005010787	snrnp200	99	87.827	Maylandia_zebra
ENSMPUG00000008949	SNRNP200	97	97.339	ENSMGAG00000001831	SNRNP200	100	97.339	Meleagris_gallopavo
ENSMPUG00000008949	SNRNP200	100	99.719	ENSMAUG00000011825	Snrnp200	100	99.719	Mesocricetus_auratus
ENSMPUG00000008949	SNRNP200	100	99.766	ENSMICG00000004710	SNRNP200	100	99.766	Microcebus_murinus
ENSMPUG00000008949	SNRNP200	100	97.144	ENSMOCG00000011814	Snrnp200	100	97.144	Microtus_ochrogaster
ENSMPUG00000008949	SNRNP200	99	89.103	ENSMMOG00000014167	snrnp200	99	88.998	Mola_mola
ENSMPUG00000008949	SNRNP200	100	99.064	ENSMODG00000008475	SNRNP200	100	99.064	Monodelphis_domestica
ENSMPUG00000008949	SNRNP200	99	90.888	ENSMALG00000001973	snrnp200	99	90.777	Monopterus_albus
ENSMPUG00000008949	SNRNP200	100	99.532	MGP_CAROLIEiJ_G0024250	Snrnp200	100	99.532	Mus_caroli
ENSMPUG00000008949	SNRNP200	100	99.579	ENSMUSG00000003660	Snrnp200	100	99.579	Mus_musculus
ENSMPUG00000008949	SNRNP200	100	99.625	MGP_PahariEiJ_G0025695	Snrnp200	100	99.625	Mus_pahari
ENSMPUG00000008949	SNRNP200	100	99.579	MGP_SPRETEiJ_G0025170	Snrnp200	100	99.579	Mus_spretus
ENSMPUG00000008949	SNRNP200	100	99.158	ENSMLUG00000010493	SNRNP200	100	99.158	Myotis_lucifugus
ENSMPUG00000008949	SNRNP200	100	95.459	ENSMLUG00000027511	-	100	95.459	Myotis_lucifugus
ENSMPUG00000008949	SNRNP200	100	99.813	ENSNGAG00000021993	Snrnp200	100	99.813	Nannospalax_galili
ENSMPUG00000008949	SNRNP200	90	90.319	ENSNBRG00000017960	snrnp200	98	90.319	Neolamprologus_brichardi
ENSMPUG00000008949	SNRNP200	100	95.165	ENSNLEG00000000025	SNRNP200	100	95.593	Nomascus_leucogenys
ENSMPUG00000008949	SNRNP200	100	100.000	ENSMEUG00000010532	SNRNP200	79	100.000	Notamacropus_eugenii
ENSMPUG00000008949	SNRNP200	100	95.880	ENSOPRG00000015464	SNRNP200	100	95.880	Ochotona_princeps
ENSMPUG00000008949	SNRNP200	100	99.579	ENSODEG00000008366	SNRNP200	100	99.579	Octodon_degus
ENSMPUG00000008949	SNRNP200	99	90.606	ENSONIG00000010714	snrnp200	99	90.496	Oreochromis_niloticus
ENSMPUG00000008949	SNRNP200	100	99.672	ENSOCUG00000009864	SNRNP200	100	99.672	Oryctolagus_cuniculus
ENSMPUG00000008949	SNRNP200	100	90.309	ENSORLG00000012286	snrnp200	100	90.309	Oryzias_latipes
ENSMPUG00000008949	SNRNP200	100	90.356	ENSORLG00020004648	snrnp200	100	90.356	Oryzias_latipes_hni
ENSMPUG00000008949	SNRNP200	100	90.309	ENSORLG00015019114	snrnp200	100	90.339	Oryzias_latipes_hsok
ENSMPUG00000008949	SNRNP200	99	90.559	ENSOMEG00000011834	snrnp200	99	90.449	Oryzias_melastigma
ENSMPUG00000008949	SNRNP200	100	99.813	ENSOGAG00000006879	SNRNP200	100	99.813	Otolemur_garnettii
ENSMPUG00000008949	SNRNP200	100	98.456	ENSOARG00000013949	SNRNP200	100	98.456	Ovis_aries
ENSMPUG00000008949	SNRNP200	100	99.813	ENSPPAG00000041559	SNRNP200	100	99.813	Pan_paniscus
ENSMPUG00000008949	SNRNP200	100	99.906	ENSPPRG00000004435	SNRNP200	100	99.906	Panthera_pardus
ENSMPUG00000008949	SNRNP200	100	99.438	ENSPTIG00000006380	SNRNP200	100	99.438	Panthera_tigris_altaica
ENSMPUG00000008949	SNRNP200	100	99.813	ENSPTRG00000012230	SNRNP200	100	99.813	Pan_troglodytes
ENSMPUG00000008949	SNRNP200	100	99.766	ENSPANG00000006017	SNRNP200	100	99.766	Papio_anubis
ENSMPUG00000008949	SNRNP200	100	91.199	ENSPKIG00000014762	snrnp200	99	91.199	Paramormyrops_kingsleyae
ENSMPUG00000008949	SNRNP200	100	96.865	ENSPSIG00000008580	SNRNP200	100	96.865	Pelodiscus_sinensis
ENSMPUG00000008949	SNRNP200	100	99.064	ENSPCIG00000023050	SNRNP200	100	99.064	Phascolarctos_cinereus
ENSMPUG00000008949	SNRNP200	100	90.454	ENSPFOG00000015110	snrnp200	99	90.454	Poecilia_formosa
ENSMPUG00000008949	SNRNP200	97	90.220	ENSPLAG00000006711	snrnp200	99	90.220	Poecilia_latipinna
ENSMPUG00000008949	SNRNP200	97	90.165	ENSPMEG00000021166	snrnp200	99	90.165	Poecilia_mexicana
ENSMPUG00000008949	SNRNP200	100	90.543	ENSPREG00000008875	snrnp200	99	90.543	Poecilia_reticulata
ENSMPUG00000008949	SNRNP200	100	99.813	ENSPPYG00000012068	SNRNP200	100	99.813	Pongo_abelii
ENSMPUG00000008949	SNRNP200	97	98.718	ENSPCAG00000008536	SNRNP200	89	98.718	Procavia_capensis
ENSMPUG00000008949	SNRNP200	100	99.813	ENSPCOG00000024608	SNRNP200	100	99.813	Propithecus_coquereli
ENSMPUG00000008949	SNRNP200	96	100.000	ENSPVAG00000005860	SNRNP200	93	100.000	Pteropus_vampyrus
ENSMPUG00000008949	SNRNP200	99	86.089	ENSPNYG00000017476	snrnp200	99	85.994	Pundamilia_nyererei
ENSMPUG00000008949	SNRNP200	100	86.096	ENSPNAG00000010998	snrnp200	99	86.096	Pygocentrus_nattereri
ENSMPUG00000008949	SNRNP200	100	99.719	ENSRNOG00000012157	Snrnp200	100	99.719	Rattus_norvegicus
ENSMPUG00000008949	SNRNP200	100	99.813	ENSRBIG00000044690	-	100	99.813	Rhinopithecus_bieti
ENSMPUG00000008949	SNRNP200	100	99.813	ENSRROG00000037952	-	100	99.813	Rhinopithecus_roxellana
ENSMPUG00000008949	SNRNP200	100	99.766	ENSSBOG00000035471	SNRNP200	100	99.766	Saimiri_boliviensis_boliviensis
ENSMPUG00000008949	SNRNP200	97	98.984	ENSSHAG00000000758	SNRNP200	100	98.984	Sarcophilus_harrisii
ENSMPUG00000008949	SNRNP200	99	91.545	ENSSFOG00015018826	snrnp200	99	91.433	Scleropages_formosus
ENSMPUG00000008949	SNRNP200	99	90.559	ENSSMAG00000005463	snrnp200	99	90.449	Scophthalmus_maximus
ENSMPUG00000008949	SNRNP200	99	90.841	ENSSDUG00000021410	snrnp200	99	90.730	Seriola_dumerili
ENSMPUG00000008949	SNRNP200	99	90.794	ENSSLDG00000010884	snrnp200	99	90.684	Seriola_lalandi_dorsalis
ENSMPUG00000008949	SNRNP200	95	99.196	ENSSARG00000010728	SNRNP200	96	99.196	Sorex_araneus
ENSMPUG00000008949	SNRNP200	100	97.612	ENSSPUG00000003726	-	100	97.612	Sphenodon_punctatus
ENSMPUG00000008949	SNRNP200	99	90.888	ENSSPAG00000001842	snrnp200	99	90.777	Stegastes_partitus
ENSMPUG00000008949	SNRNP200	100	99.719	ENSSSCG00000008127	SNRNP200	100	99.719	Sus_scrofa
ENSMPUG00000008949	SNRNP200	99	87.975	ENSTGUG00000014475	-	100	87.975	Taeniopygia_guttata
ENSMPUG00000008949	SNRNP200	99	90.512	ENSTRUG00000001307	snrnp200	99	90.403	Takifugu_rubripes
ENSMPUG00000008949	SNRNP200	100	85.925	ENSTNIG00000004320	snrnp200	100	85.925	Tetraodon_nigroviridis
ENSMPUG00000008949	SNRNP200	82	100.000	ENSTBEG00000003329	-	67	100.000	Tupaia_belangeri
ENSMPUG00000008949	SNRNP200	100	99.532	ENSTTRG00000004983	SNRNP200	100	99.532	Tursiops_truncatus
ENSMPUG00000008949	SNRNP200	75	93.023	ENSUAMG00000008395	-	95	93.023	Ursus_americanus
ENSMPUG00000008949	SNRNP200	100	99.906	ENSUMAG00000012385	SNRNP200	100	99.906	Ursus_maritimus
ENSMPUG00000008949	SNRNP200	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSMPUG00000008949	SNRNP200	100	99.673	ENSVVUG00000026247	SNRNP200	100	99.673	Vulpes_vulpes
ENSMPUG00000008949	SNRNP200	100	94.437	ENSXETG00000001243	snrnp200	100	94.437	Xenopus_tropicalis
ENSMPUG00000008949	SNRNP200	97	90.471	ENSXMAG00000002058	snrnp200	98	90.471	Xiphophorus_maculatus