EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMPUG00000009135 (Gene tree)
Gene ID: 101679921
Gene Symbol: POLR1A
Alias: DKFZP586M0122|FLJ21915|RPA1|RPO1-4
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Mustela_putorius_furo
Status: putative
Strand: Minus strand
Length: 69305 bases
Position: chrGL896905.1:25472348-25541652
Accession: 101679921
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMPUP00000009060	RNA_pol_Rpb1_5	PF04998.17	4.5e-104	1	1
ENSMPUP00000009060	RNA_pol_Rpb1_4	PF05000.17	9.9e-26	1	1
ENSMPUP00000009060	RNA_pol_Rpb1_2	PF00623.20	2.3e-70	1	1
ENSMPUP00000009060	RNA_pol_Rpb1_3	PF04983.18	6.5e-37	1	1
ENSMPUP00000009060	RNA_pol_Rpb1_1	PF04997.12	1.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMPUT00000009211	POLR1A-201	5157	-	ENSMPUP00000009060	1718 (aa)	XP_004742401	M3YCK3

Gene Model

Click here to download ENSMPUG00000009135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMPUG00000009135's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMPUG00000009135	POLR1A	68	32.796	ENSMPUG00000003790	POLR3A	70	32.796
ENSMPUG00000009135	POLR1A	64	37.313	ENSMPUG00000009648	-	54	37.313

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMPUG00000009135	POLR1A	100	90.465	ENSG00000068654	POLR1A	100	90.523	Homo_sapiens
ENSMPUG00000009135	POLR1A	69	68.182	ENSAPOG00000017945	polr1a	99	68.182	Acanthochromis_polyacanthus
ENSMPUG00000009135	POLR1A	100	95.634	ENSAMEG00000005807	POLR1A	100	96.824	Ailuropoda_melanoleuca
ENSMPUG00000009135	POLR1A	100	63.283	ENSACIG00000022147	polr1a	100	62.464	Amphilophus_citrinellus
ENSMPUG00000009135	POLR1A	100	66.647	ENSAOCG00000017336	polr1a	100	68.759	Amphiprion_ocellaris
ENSMPUG00000009135	POLR1A	100	66.589	ENSAPEG00000016105	polr1a	100	66.647	Amphiprion_percula
ENSMPUG00000009135	POLR1A	100	66.782	ENSATEG00000016773	polr1a	100	66.050	Anabas_testudineus
ENSMPUG00000009135	POLR1A	86	73.207	ENSAPLG00000013871	POLR1A	99	73.406	Anas_platyrhynchos
ENSMPUG00000009135	POLR1A	99	69.618	ENSACAG00000012141	POLR1A	99	68.934	Anolis_carolinensis
ENSMPUG00000009135	POLR1A	100	89.703	ENSANAG00000033927	POLR1A	100	90.111	Aotus_nancymaae
ENSMPUG00000009135	POLR1A	100	62.587	ENSACLG00000020541	polr1a	100	62.059	Astatotilapia_calliptera
ENSMPUG00000009135	POLR1A	100	90.983	ENSBTAG00000006481	POLR1A	100	90.983	Bos_taurus
ENSMPUG00000009135	POLR1A	99	38.316	WBGene00012999	rpoa-1	98	37.999	Caenorhabditis_elegans
ENSMPUG00000009135	POLR1A	100	89.302	ENSCJAG00000019547	POLR1A	100	89.477	Callithrix_jacchus
ENSMPUG00000009135	POLR1A	100	95.518	ENSCAFG00000007613	POLR1A	100	95.518	Canis_familiaris
ENSMPUG00000009135	POLR1A	100	95.299	ENSCAFG00020014752	POLR1A	100	95.299	Canis_lupus_dingo
ENSMPUG00000009135	POLR1A	100	89.443	ENSCHIG00000018204	POLR1A	99	90.609	Capra_hircus
ENSMPUG00000009135	POLR1A	100	88.889	ENSTSYG00000002761	POLR1A	100	88.773	Carlito_syrichta
ENSMPUG00000009135	POLR1A	97	84.868	ENSCAPG00000010132	POLR1A	100	84.868	Cavia_aperea
ENSMPUG00000009135	POLR1A	100	89.477	ENSCPOG00000012350	POLR1A	100	89.477	Cavia_porcellus
ENSMPUG00000009135	POLR1A	100	89.767	ENSCCAG00000019839	POLR1A	100	89.942	Cebus_capucinus
ENSMPUG00000009135	POLR1A	100	91.105	ENSCATG00000029786	POLR1A	100	91.163	Cercocebus_atys
ENSMPUG00000009135	POLR1A	100	89.501	ENSCLAG00000005187	POLR1A	100	89.501	Chinchilla_lanigera
ENSMPUG00000009135	POLR1A	100	91.047	ENSCSAG00000016251	POLR1A	100	91.105	Chlorocebus_sabaeus
ENSMPUG00000009135	POLR1A	99	75.363	ENSCPBG00000001115	POLR1A	99	75.073	Chrysemys_picta_bellii
ENSMPUG00000009135	POLR1A	99	47.455	ENSCSAVG00000007184	-	91	55.364	Ciona_savignyi
ENSMPUG00000009135	POLR1A	100	88.263	ENSCANG00000031785	POLR1A	100	87.972	Colobus_angolensis_palliatus
ENSMPUG00000009135	POLR1A	100	83.652	ENSCGRG00001006651	Polr1a	100	83.652	Cricetulus_griseus_chok1gshd
ENSMPUG00000009135	POLR1A	60	87.306	ENSCGRG00000010834	Polr1a	100	87.306	Cricetulus_griseus_crigri
ENSMPUG00000009135	POLR1A	100	62.195	ENSCSEG00000020190	polr1a	100	62.485	Cynoglossus_semilaevis
ENSMPUG00000009135	POLR1A	100	65.356	ENSCVAG00000020941	polr1a	100	65.029	Cyprinodon_variegatus
ENSMPUG00000009135	POLR1A	100	67.150	ENSDARG00000098375	polr1a	100	66.299	Danio_rerio
ENSMPUG00000009135	POLR1A	100	83.865	ENSDNOG00000010829	POLR1A	100	83.865	Dasypus_novemcinctus
ENSMPUG00000009135	POLR1A	100	88.586	ENSDORG00000008298	Polr1a	100	88.586	Dipodomys_ordii
ENSMPUG00000009135	POLR1A	80	44.484	FBgn0019938	RpI1	99	43.430	Drosophila_melanogaster
ENSMPUG00000009135	POLR1A	72	100.000	ENSETEG00000000412	-	72	100.000	Echinops_telfairi
ENSMPUG00000009135	POLR1A	88	68.217	ENSEBUG00000005667	-	99	48.028	Eptatretus_burgeri
ENSMPUG00000009135	POLR1A	100	93.314	ENSEASG00005001625	POLR1A	100	93.488	Equus_asinus_asinus
ENSMPUG00000009135	POLR1A	100	93.314	ENSECAG00000030510	-	100	96.050	Equus_caballus
ENSMPUG00000009135	POLR1A	100	93.314	ENSECAG00000036306	-	100	96.050	Equus_caballus
ENSMPUG00000009135	POLR1A	100	93.314	ENSECAG00000010092	POLR1A	100	96.050	Equus_caballus
ENSMPUG00000009135	POLR1A	85	95.745	ENSEEUG00000000676	POLR1A	85	95.556	Erinaceus_europaeus
ENSMPUG00000009135	POLR1A	100	67.633	ENSELUG00000012769	polr1a	99	67.517	Esox_lucius
ENSMPUG00000009135	POLR1A	100	94.645	ENSFCAG00000008966	POLR1A	100	94.645	Felis_catus
ENSMPUG00000009135	POLR1A	99	71.798	ENSFALG00000010082	POLR1A	99	71.203	Ficedula_albicollis
ENSMPUG00000009135	POLR1A	100	89.076	ENSFDAG00000013726	POLR1A	100	89.192	Fukomys_damarensis
ENSMPUG00000009135	POLR1A	100	61.985	ENSFHEG00000005996	polr1a	100	61.957	Fundulus_heteroclitus
ENSMPUG00000009135	POLR1A	100	60.675	ENSGMOG00000002230	polr1a	100	59.815	Gadus_morhua
ENSMPUG00000009135	POLR1A	90	70.447	ENSGALG00000038160	-	99	70.577	Gallus_gallus
ENSMPUG00000009135	POLR1A	100	64.501	ENSGAFG00000015266	polr1a	100	63.809	Gambusia_affinis
ENSMPUG00000009135	POLR1A	100	65.052	ENSGACG00000018791	polr1a	100	64.487	Gasterosteus_aculeatus
ENSMPUG00000009135	POLR1A	89	76.410	ENSGAGG00000004984	-	96	82.301	Gopherus_agassizii
ENSMPUG00000009135	POLR1A	100	90.523	ENSGGOG00000001788	POLR1A	100	90.581	Gorilla_gorilla
ENSMPUG00000009135	POLR1A	90	65.183	ENSHBUG00000020021	polr1a	99	65.183	Haplochromis_burtoni
ENSMPUG00000009135	POLR1A	100	90.233	ENSHGLG00000006334	POLR1A	100	90.233	Heterocephalus_glaber_female
ENSMPUG00000009135	POLR1A	100	89.971	ENSHGLG00100006614	POLR1A	100	89.971	Heterocephalus_glaber_male
ENSMPUG00000009135	POLR1A	100	62.189	ENSHCOG00000003345	polr1a	100	62.073	Hippocampus_comes
ENSMPUG00000009135	POLR1A	100	66.435	ENSIPUG00000013174	polr1a	100	65.741	Ictalurus_punctatus
ENSMPUG00000009135	POLR1A	100	87.151	ENSSTOG00000012580	POLR1A	100	87.209	Ictidomys_tridecemlineatus
ENSMPUG00000009135	POLR1A	100	88.269	ENSJJAG00000013113	Polr1a	100	88.269	Jaculus_jaculus
ENSMPUG00000009135	POLR1A	100	66.163	ENSKMAG00000007399	polr1a	100	65.814	Kryptolebias_marmoratus
ENSMPUG00000009135	POLR1A	95	68.724	ENSLBEG00000015401	polr1a	99	68.557	Labrus_bergylta
ENSMPUG00000009135	POLR1A	53	76.848	ENSLACG00000003218	polr1a	100	76.848	Latimeria_chalumnae
ENSMPUG00000009135	POLR1A	100	71.024	ENSLOCG00000010881	polr1a	100	70.850	Lepisosteus_oculatus
ENSMPUG00000009135	POLR1A	100	89.913	ENSLAFG00000014948	POLR1A	100	89.977	Loxodonta_africana
ENSMPUG00000009135	POLR1A	100	91.105	ENSMFAG00000046097	POLR1A	100	91.221	Macaca_fascicularis
ENSMPUG00000009135	POLR1A	100	90.988	ENSMMUG00000015815	POLR1A	100	91.105	Macaca_mulatta
ENSMPUG00000009135	POLR1A	100	91.105	ENSMNEG00000043313	POLR1A	100	91.221	Macaca_nemestrina
ENSMPUG00000009135	POLR1A	100	90.465	ENSMLEG00000042428	POLR1A	100	90.523	Mandrillus_leucophaeus
ENSMPUG00000009135	POLR1A	100	66.241	ENSMAMG00000016565	polr1a	100	66.164	Mastacembelus_armatus
ENSMPUG00000009135	POLR1A	100	65.951	ENSMZEG00005004915	polr1a	100	65.529	Maylandia_zebra
ENSMPUG00000009135	POLR1A	99	69.454	ENSMGAG00000013111	POLR1A	99	69.628	Meleagris_gallopavo
ENSMPUG00000009135	POLR1A	92	88.109	ENSMAUG00000008497	Polr1a	100	88.109	Mesocricetus_auratus
ENSMPUG00000009135	POLR1A	100	91.284	ENSMICG00000000757	POLR1A	100	91.168	Microcebus_murinus
ENSMPUG00000009135	POLR1A	100	87.768	ENSMOCG00000000122	Polr1a	100	87.594	Microtus_ochrogaster
ENSMPUG00000009135	POLR1A	100	65.253	ENSMMOG00000010216	polr1a	100	65.212	Mola_mola
ENSMPUG00000009135	POLR1A	100	75.144	ENSMODG00000009335	POLR1A	100	75.029	Monodelphis_domestica
ENSMPUG00000009135	POLR1A	100	65.679	ENSMALG00000013363	polr1a	100	65.896	Monopterus_albus
ENSMPUG00000009135	POLR1A	100	86.493	MGP_CAROLIEiJ_G0028494	Polr1a	100	86.319	Mus_caroli
ENSMPUG00000009135	POLR1A	100	86.551	ENSMUSG00000049553	Polr1a	100	86.377	Mus_musculus
ENSMPUG00000009135	POLR1A	100	87.188	MGP_PahariEiJ_G0022230	Polr1a	100	87.014	Mus_pahari
ENSMPUG00000009135	POLR1A	100	84.983	MGP_SPRETEiJ_G0029499	Polr1a	100	85.714	Mus_spretus
ENSMPUG00000009135	POLR1A	100	90.562	ENSMLUG00000015723	POLR1A	100	90.562	Myotis_lucifugus
ENSMPUG00000009135	POLR1A	100	88.239	ENSNGAG00000017907	Polr1a	100	88.065	Nannospalax_galili
ENSMPUG00000009135	POLR1A	100	66.009	ENSNBRG00000000519	polr1a	100	65.645	Neolamprologus_brichardi
ENSMPUG00000009135	POLR1A	100	88.947	ENSNLEG00000002264	POLR1A	100	88.831	Nomascus_leucogenys
ENSMPUG00000009135	POLR1A	75	91.339	ENSMEUG00000011665	-	75	91.339	Notamacropus_eugenii
ENSMPUG00000009135	POLR1A	99	83.314	ENSOPRG00000008269	POLR1A	100	83.206	Ochotona_princeps
ENSMPUG00000009135	POLR1A	100	89.831	ENSODEG00000003542	POLR1A	100	89.831	Octodon_degus
ENSMPUG00000009135	POLR1A	100	66.377	ENSONIG00000015895	polr1a	100	65.875	Oreochromis_niloticus
ENSMPUG00000009135	POLR1A	100	89.948	ENSOCUG00000010138	POLR1A	100	90.122	Oryctolagus_cuniculus
ENSMPUG00000009135	POLR1A	100	64.948	ENSORLG00000008753	polr1a	99	64.879	Oryzias_latipes
ENSMPUG00000009135	POLR1A	100	63.747	ENSORLG00020020726	polr1a	99	63.689	Oryzias_latipes_hni
ENSMPUG00000009135	POLR1A	96	74.468	ENSORLG00015016071	polr1a	99	74.444	Oryzias_latipes_hsok
ENSMPUG00000009135	POLR1A	100	90.291	ENSOGAG00000004031	POLR1A	100	90.291	Otolemur_garnettii
ENSMPUG00000009135	POLR1A	100	90.883	ENSOARG00000020601	POLR1A	100	90.941	Ovis_aries
ENSMPUG00000009135	POLR1A	100	90.349	ENSPPAG00000042450	POLR1A	100	90.407	Pan_paniscus
ENSMPUG00000009135	POLR1A	100	94.878	ENSPPRG00000006702	POLR1A	100	94.878	Panthera_pardus
ENSMPUG00000009135	POLR1A	100	94.316	ENSPTIG00000018783	POLR1A	100	94.316	Panthera_tigris_altaica
ENSMPUG00000009135	POLR1A	100	90.465	ENSPTRG00000012147	POLR1A	100	90.465	Pan_troglodytes
ENSMPUG00000009135	POLR1A	100	90.988	ENSPANG00000025908	POLR1A	100	91.047	Papio_anubis
ENSMPUG00000009135	POLR1A	94	75.694	ENSPKIG00000005468	polr1a	99	75.694	Paramormyrops_kingsleyae
ENSMPUG00000009135	POLR1A	63	70.936	ENSPSIG00000009321	-	99	71.311	Pelodiscus_sinensis
ENSMPUG00000009135	POLR1A	54	68.235	ENSPMGG00000009718	polr1a	95	68.235	Periophthalmus_magnuspinnatus
ENSMPUG00000009135	POLR1A	100	88.086	ENSPEMG00000022224	Polr1a	100	88.419	Peromyscus_maniculatus_bairdii
ENSMPUG00000009135	POLR1A	95	79.562	ENSPCIG00000004222	POLR1A	99	79.854	Phascolarctos_cinereus
ENSMPUG00000009135	POLR1A	100	64.907	ENSPFOG00000005025	polr1a	100	64.907	Poecilia_formosa
ENSMPUG00000009135	POLR1A	100	65.041	ENSPLAG00000021389	polr1a	100	64.468	Poecilia_latipinna
ENSMPUG00000009135	POLR1A	100	63.457	ENSPMEG00000006463	polr1a	100	63.710	Poecilia_mexicana
ENSMPUG00000009135	POLR1A	100	65.197	ENSPREG00000002389	polr1a	100	64.418	Poecilia_reticulata
ENSMPUG00000009135	POLR1A	100	90.058	ENSPPYG00000012217	POLR1A	100	90.116	Pongo_abelii
ENSMPUG00000009135	POLR1A	92	100.000	ENSPCAG00000011582	POLR1A	92	100.000	Procavia_capensis
ENSMPUG00000009135	POLR1A	100	91.284	ENSPCOG00000026987	POLR1A	100	91.226	Propithecus_coquereli
ENSMPUG00000009135	POLR1A	95	93.382	ENSPVAG00000012674	POLR1A	95	92.933	Pteropus_vampyrus
ENSMPUG00000009135	POLR1A	100	65.951	ENSPNYG00000000026	polr1a	100	65.529	Pundamilia_nyererei
ENSMPUG00000009135	POLR1A	100	67.110	ENSPNAG00000019223	polr1a	99	67.916	Pygocentrus_nattereri
ENSMPUG00000009135	POLR1A	100	88.290	ENSRNOG00000009545	Polr1a	100	88.116	Rattus_norvegicus
ENSMPUG00000009135	POLR1A	100	90.407	ENSRBIG00000028335	POLR1A	100	90.523	Rhinopithecus_bieti
ENSMPUG00000009135	POLR1A	100	90.349	ENSRROG00000031473	POLR1A	100	90.465	Rhinopithecus_roxellana
ENSMPUG00000009135	POLR1A	99	36.353	YOR341W	RPA190	99	36.399	Saccharomyces_cerevisiae
ENSMPUG00000009135	POLR1A	100	89.302	ENSSBOG00000030262	POLR1A	100	89.477	Saimiri_boliviensis_boliviensis
ENSMPUG00000009135	POLR1A	100	73.441	ENSSHAG00000014739	POLR1A	100	73.472	Sarcophilus_harrisii
ENSMPUG00000009135	POLR1A	100	67.673	ENSSFOG00015019716	polr1a	100	67.285	Scleropages_formosus
ENSMPUG00000009135	POLR1A	100	66.261	ENSSMAG00000014342	polr1a	100	65.913	Scophthalmus_maximus
ENSMPUG00000009135	POLR1A	100	67.246	ENSSDUG00000014631	polr1a	100	67.072	Seriola_dumerili
ENSMPUG00000009135	POLR1A	100	65.509	ENSSLDG00000024095	polr1a	100	64.672	Seriola_lalandi_dorsalis
ENSMPUG00000009135	POLR1A	75	96.809	ENSSARG00000003136	-	76	96.809	Sorex_araneus
ENSMPUG00000009135	POLR1A	94	78.462	ENSSPUG00000004215	POLR1A	98	78.462	Sphenodon_punctatus
ENSMPUG00000009135	POLR1A	63	72.902	ENSSPAG00000016341	polr1a	94	72.902	Stegastes_partitus
ENSMPUG00000009135	POLR1A	83	92.852	ENSSSCG00000008226	POLR1A	99	92.832	Sus_scrofa
ENSMPUG00000009135	POLR1A	99	70.630	ENSTGUG00000010704	POLR1A	100	70.630	Taeniopygia_guttata
ENSMPUG00000009135	POLR1A	100	64.852	ENSTRUG00000002210	polr1a	97	66.071	Takifugu_rubripes
ENSMPUG00000009135	POLR1A	100	59.839	ENSTNIG00000010116	polr1a	100	59.828	Tetraodon_nigroviridis
ENSMPUG00000009135	POLR1A	74	96.903	ENSTBEG00000008646	POLR1A	74	96.903	Tupaia_belangeri
ENSMPUG00000009135	POLR1A	100	87.951	ENSTTRG00000008597	POLR1A	100	87.776	Tursiops_truncatus
ENSMPUG00000009135	POLR1A	69	95.936	ENSUAMG00000012158	-	94	95.936	Ursus_americanus
ENSMPUG00000009135	POLR1A	100	95.343	ENSUMAG00000006700	POLR1A	100	95.343	Ursus_maritimus
ENSMPUG00000009135	POLR1A	100	95.343	ENSVVUG00000001245	POLR1A	100	95.343	Vulpes_vulpes
ENSMPUG00000009135	POLR1A	100	68.595	ENSXETG00000001952	polr1a	100	69.790	Xenopus_tropicalis
ENSMPUG00000009135	POLR1A	100	65.275	ENSXMAG00000004032	polr1a	100	64.686	Xiphophorus_maculatus