EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMPUG00000009648 (Gene tree)
Gene ID: 101687537
Gene Symbol: -
Alias: -
Full Name: RNA polymerase II subunit A
Gene Type: protein_coding
Species: Mustela_putorius_furo
Status: putative
Strand: Minus strand
Length: 22828 bases
Position: chrGL896973.1:6695243-6718070
Accession: 101687537
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMPUP00000009572	RNA_pol_Rpb1_5	PF04998.17	5.2e-101	1	1
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	1	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	2	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	3	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	4	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	5	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	6	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	7	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	8	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	9	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	10	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	11	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	12	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	13	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	14	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	15	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	16	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	17	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	18	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	19	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	20	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	21	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	22	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	23	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	24	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	25	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	26	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	27	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	28	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	29	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	30	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	31	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	32	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	33	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	34	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	35	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	36	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	37	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	38	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	39	40
ENSMPUP00000009572	RNA_pol_Rpb1_R	PF05001.13	2.8e-27	40	40
ENSMPUP00000009572	RNA_pol_Rpb1_4	PF05000.17	3e-38	1	1
ENSMPUP00000009572	RNA_pol_Rpb1_2	PF00623.20	9.4e-75	1	1
ENSMPUP00000009572	RNA_pol_Rpb1_3	PF04983.18	4.2e-50	1	1
ENSMPUP00000009572	RNA_pol_Rpb1_1	PF04997.12	4.1e-109	1	1
ENSMPUP00000009572	RNA_pol_Rpb1_7	PF04990.12	1.7e-54	1	1
ENSMPUP00000009572	RNA_pol_Rpb1_6	PF04992.14	1.7e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMPUT00000009728	-	6440	XM_004760299	ENSMPUP00000009572	1970 (aa)	XP_004760356	M3YE15

Gene Model

Click here to download ENSMPUG00000009648's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMPUG00000009648's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMPUG00000009648	-	66	38.521	ENSMPUG00000003790	POLR3A	90	38.377
ENSMPUG00000009648	-	54	37.313	ENSMPUG00000009135	POLR1A	64	37.313

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMPUG00000009648	-	82	94.482	ENSAPOG00000006552	polr2a	91	94.475	Acanthochromis_polyacanthus
ENSMPUG00000009648	-	100	99.696	ENSAMEG00000016265	-	100	99.696	Ailuropoda_melanoleuca
ENSMPUG00000009648	-	82	92.374	ENSACIG00000015982	polr2a	81	92.365	Amphilophus_citrinellus
ENSMPUG00000009648	-	97	92.436	ENSAOCG00000004255	polr2a	96	92.427	Amphiprion_ocellaris
ENSMPUG00000009648	-	82	94.544	ENSAPEG00000012623	polr2a	82	94.538	Amphiprion_percula
ENSMPUG00000009648	-	82	94.420	ENSATEG00000019644	polr2a	82	94.413	Anabas_testudineus
ENSMPUG00000009648	-	100	98.426	ENSACAG00000014561	POLR2A	100	98.426	Anolis_carolinensis
ENSMPUG00000009648	-	100	99.898	ENSANAG00000020093	-	100	99.898	Aotus_nancymaae
ENSMPUG00000009648	-	82	94.234	ENSACLG00000006735	polr2a	82	94.227	Astatotilapia_calliptera
ENSMPUG00000009648	-	82	94.668	ENSAMXG00000020046	polr2a	82	94.662	Astyanax_mexicanus
ENSMPUG00000009648	-	100	99.848	ENSBTAG00000046765	POLR2A	100	99.848	Bos_taurus
ENSMPUG00000009648	-	94	69.902	WBGene00000123	ama-1	99	72.727	Caenorhabditis_elegans
ENSMPUG00000009648	-	100	99.543	ENSCAFG00000016532	POLR2A	100	99.721	Canis_familiaris
ENSMPUG00000009648	-	100	99.036	ENSCAFG00020007929	-	100	99.036	Canis_lupus_dingo
ENSMPUG00000009648	-	100	99.848	ENSCHIG00000027173	-	100	99.848	Capra_hircus
ENSMPUG00000009648	-	100	97.411	ENSTSYG00000012803	-	100	97.919	Carlito_syrichta
ENSMPUG00000009648	-	98	95.609	ENSCAPG00000001882	-	98	98.543	Cavia_aperea
ENSMPUG00000009648	-	100	95.683	ENSCPOG00000014812	-	98	98.571	Cavia_porcellus
ENSMPUG00000009648	-	100	99.898	ENSCCAG00000020938	-	100	99.898	Cebus_capucinus
ENSMPUG00000009648	-	100	99.848	ENSCATG00000013680	-	100	99.848	Cercocebus_atys
ENSMPUG00000009648	-	100	99.746	ENSCLAG00000012196	-	100	99.746	Chinchilla_lanigera
ENSMPUG00000009648	-	82	90.623	ENSCSAG00000011644	-	82	90.623	Chlorocebus_sabaeus
ENSMPUG00000009648	-	100	93.909	ENSCPBG00000012697	POLR2A	100	93.909	Chrysemys_picta_bellii
ENSMPUG00000009648	-	99	76.549	ENSCING00000007884	-	99	76.813	Ciona_intestinalis
ENSMPUG00000009648	-	95	83.333	ENSCSAVG00000008334	-	99	83.871	Ciona_savignyi
ENSMPUG00000009648	-	100	99.188	ENSCANG00000010622	-	100	99.188	Colobus_angolensis_palliatus
ENSMPUG00000009648	-	100	94.260	ENSCGRG00001003538	Polr2a	100	94.562	Cricetulus_griseus_chok1gshd
ENSMPUG00000009648	-	96	95.388	ENSCGRG00000012105	Polr2a	95	95.951	Cricetulus_griseus_crigri
ENSMPUG00000009648	-	82	93.800	ENSCSEG00000002635	polr2a	82	93.793	Cynoglossus_semilaevis
ENSMPUG00000009648	-	82	94.544	ENSCVAG00000005156	polr2a	82	94.538	Cyprinodon_variegatus
ENSMPUG00000009648	-	82	94.486	ENSDARG00000099966	polr2a	82	94.479	Danio_rerio
ENSMPUG00000009648	-	100	96.904	ENSDNOG00000016482	-	100	96.904	Dasypus_novemcinctus
ENSMPUG00000009648	-	100	99.898	ENSDORG00000008667	Polr2a	100	99.898	Dipodomys_ordii
ENSMPUG00000009648	-	99	69.889	FBgn0003277	RpII215	99	74.703	Drosophila_melanogaster
ENSMPUG00000009648	-	94	87.958	ENSETEG00000002540	-	94	84.580	Echinops_telfairi
ENSMPUG00000009648	-	81	88.022	ENSEBUG00000013967	polr2a	82	87.430	Eptatretus_burgeri
ENSMPUG00000009648	-	100	96.853	ENSEASG00005019114	-	100	96.954	Equus_asinus_asinus
ENSMPUG00000009648	-	100	99.848	ENSECAG00000018485	POLR2A	100	99.848	Equus_caballus
ENSMPUG00000009648	-	87	99.666	ENSEEUG00000001154	-	95	99.666	Erinaceus_europaeus
ENSMPUG00000009648	-	89	90.018	ENSELUG00000014284	polr2a	84	90.685	Esox_lucius
ENSMPUG00000009648	-	100	99.848	ENSFDAG00000008287	-	100	99.848	Fukomys_damarensis
ENSMPUG00000009648	-	85	94.544	ENSFHEG00000001768	polr2a	98	94.538	Fundulus_heteroclitus
ENSMPUG00000009648	-	99	90.241	ENSGMOG00000007725	polr2a	100	100.000	Gadus_morhua
ENSMPUG00000009648	-	99	94.366	ENSGAFG00000005389	polr2a	99	92.303	Gambusia_affinis
ENSMPUG00000009648	-	99	90.750	ENSGACG00000019366	polr2a	100	88.249	Gasterosteus_aculeatus
ENSMPUG00000009648	-	100	98.075	ENSGGOG00000014800	-	100	98.075	Gorilla_gorilla
ENSMPUG00000009648	-	85	94.234	ENSHBUG00000018937	polr2a	99	94.227	Haplochromis_burtoni
ENSMPUG00000009648	-	100	99.848	ENSHGLG00000012381	POLR2A	100	99.848	Heterocephalus_glaber_female
ENSMPUG00000009648	-	100	99.848	ENSHGLG00100014843	POLR2A	100	99.848	Heterocephalus_glaber_male
ENSMPUG00000009648	-	82	93.924	ENSHCOG00000011874	polr2a	82	93.917	Hippocampus_comes
ENSMPUG00000009648	-	82	94.172	ENSIPUG00000002613	Polr2a	82	94.165	Ictalurus_punctatus
ENSMPUG00000009648	-	100	99.898	ENSSTOG00000001304	-	100	99.898	Ictidomys_tridecemlineatus
ENSMPUG00000009648	-	100	99.797	ENSJJAG00000013049	Polr2a	100	99.797	Jaculus_jaculus
ENSMPUG00000009648	-	80	85.355	ENSKMAG00000016343	polr2a	86	89.286	Kryptolebias_marmoratus
ENSMPUG00000009648	-	82	94.172	ENSLBEG00000027652	polr2a	82	94.165	Labrus_bergylta
ENSMPUG00000009648	-	80	87.223	ENSLACG00000012071	POLR2A	81	87.278	Latimeria_chalumnae
ENSMPUG00000009648	-	91	94.840	ENSLOCG00000013863	polr2a	99	94.534	Lepisosteus_oculatus
ENSMPUG00000009648	-	100	99.848	ENSLAFG00000008626	-	100	99.848	Loxodonta_africana
ENSMPUG00000009648	-	50	98.161	ENSMFAG00000007042	-	99	98.161	Macaca_fascicularis
ENSMPUG00000009648	-	100	99.848	ENSMMUG00000023620	-	100	99.848	Macaca_mulatta
ENSMPUG00000009648	-	100	99.140	ENSMNEG00000040407	-	100	99.140	Macaca_nemestrina
ENSMPUG00000009648	-	99	94.921	ENSMLEG00000030263	-	99	98.161	Mandrillus_leucophaeus
ENSMPUG00000009648	-	82	94.296	ENSMAMG00000003351	polr2a	82	94.289	Mastacembelus_armatus
ENSMPUG00000009648	-	82	94.234	ENSMZEG00005021429	polr2a	82	94.227	Maylandia_zebra
ENSMPUG00000009648	-	50	99.796	ENSMAUG00000021055	-	99	99.796	Mesocricetus_auratus
ENSMPUG00000009648	-	100	99.797	ENSMICG00000013372	-	100	99.797	Microcebus_murinus
ENSMPUG00000009648	-	100	93.122	ENSMOCG00000018279	Polr2a	100	93.327	Microtus_ochrogaster
ENSMPUG00000009648	-	87	93.800	ENSMMOG00000012515	polr2a	95	93.793	Mola_mola
ENSMPUG00000009648	-	100	99.492	ENSMODG00000007009	-	100	99.492	Monodelphis_domestica
ENSMPUG00000009648	-	94	91.708	ENSMALG00000008716	polr2a	99	92.365	Monopterus_albus
ENSMPUG00000009648	-	100	99.848	MGP_CAROLIEiJ_G0016587	Polr2a	100	99.848	Mus_caroli
ENSMPUG00000009648	-	100	99.848	ENSMUSG00000005198	Polr2a	100	99.848	Mus_musculus
ENSMPUG00000009648	-	100	98.078	MGP_PahariEiJ_G0017718	Polr2a	100	98.078	Mus_pahari
ENSMPUG00000009648	-	100	99.848	MGP_SPRETEiJ_G0017423	Polr2a	100	99.848	Mus_spretus
ENSMPUG00000009648	-	100	99.391	ENSMLUG00000009088	-	100	99.391	Myotis_lucifugus
ENSMPUG00000009648	-	100	99.898	ENSNGAG00000002543	Polr2a	100	99.898	Nannospalax_galili
ENSMPUG00000009648	-	82	92.188	ENSNBRG00000002005	polr2a	81	92.179	Neolamprologus_brichardi
ENSMPUG00000009648	-	100	98.683	ENSNLEG00000009460	-	100	98.683	Nomascus_leucogenys
ENSMPUG00000009648	-	94	99.346	ENSMEUG00000008611	-	93	99.346	Notamacropus_eugenii
ENSMPUG00000009648	-	80	99.747	ENSOPRG00000015116	-	99	99.747	Ochotona_princeps
ENSMPUG00000009648	-	100	92.195	ENSODEG00000017674	-	100	95.076	Octodon_degus
ENSMPUG00000009648	-	82	94.420	ENSONIG00000009231	polr2a	82	94.413	Oreochromis_niloticus
ENSMPUG00000009648	-	100	97.311	ENSOCUG00000017929	-	100	97.653	Oryctolagus_cuniculus
ENSMPUG00000009648	-	82	94.172	ENSORLG00000006431	polr2a	82	94.165	Oryzias_latipes
ENSMPUG00000009648	-	82	94.172	ENSORLG00020010235	polr2a	82	94.165	Oryzias_latipes_hni
ENSMPUG00000009648	-	82	94.172	ENSORLG00015007075	polr2a	82	94.165	Oryzias_latipes_hsok
ENSMPUG00000009648	-	92	94.282	ENSOMEG00000010713	polr2a	100	94.282	Oryzias_melastigma
ENSMPUG00000009648	-	100	99.746	ENSOGAG00000033608	-	100	99.746	Otolemur_garnettii
ENSMPUG00000009648	-	98	99.683	ENSOARG00000013874	-	100	99.683	Ovis_aries
ENSMPUG00000009648	-	93	97.127	ENSPPAG00000043734	-	100	97.310	Pan_paniscus
ENSMPUG00000009648	-	100	98.683	ENSPTRG00000008691	POLR2A	100	98.683	Pan_troglodytes
ENSMPUG00000009648	-	100	99.188	ENSPANG00000024099	-	100	99.188	Papio_anubis
ENSMPUG00000009648	-	77	92.804	ENSPKIG00000005727	polr2a	85	82.000	Paramormyrops_kingsleyae
ENSMPUG00000009648	-	98	96.418	ENSPSIG00000014006	POLR2A	100	96.418	Pelodiscus_sinensis
ENSMPUG00000009648	-	100	94.225	ENSPMGG00000019734	polr2a	99	94.662	Periophthalmus_magnuspinnatus
ENSMPUG00000009648	-	100	99.898	ENSPEMG00000012521	Polr2a	100	99.898	Peromyscus_maniculatus_bairdii
ENSMPUG00000009648	-	96	87.257	ENSPCIG00000028851	-	96	87.257	Phascolarctos_cinereus
ENSMPUG00000009648	-	85	94.482	ENSPFOG00000007890	polr2a	99	94.475	Poecilia_formosa
ENSMPUG00000009648	-	85	94.482	ENSPLAG00000007399	polr2a	99	94.475	Poecilia_latipinna
ENSMPUG00000009648	-	85	94.482	ENSPMEG00000002071	polr2a	99	94.475	Poecilia_mexicana
ENSMPUG00000009648	-	82	94.420	ENSPREG00000013122	polr2a	82	94.413	Poecilia_reticulata
ENSMPUG00000009648	-	100	96.704	ENSPPYG00000007924	-	100	98.834	Pongo_abelii
ENSMPUG00000009648	-	92	99.737	ENSPCAG00000006951	-	92	99.737	Procavia_capensis
ENSMPUG00000009648	-	100	98.690	ENSPCOG00000025260	-	100	98.690	Propithecus_coquereli
ENSMPUG00000009648	-	100	99.645	ENSPVAG00000005069	-	100	99.645	Pteropus_vampyrus
ENSMPUG00000009648	-	83	94.499	ENSPNYG00000022340	polr2a	82	94.289	Pundamilia_nyererei
ENSMPUG00000009648	-	82	94.482	ENSPNAG00000011237	polr2a	82	94.475	Pygocentrus_nattereri
ENSMPUG00000009648	-	100	99.898	ENSRNOG00000028834	Polr2a	100	99.898	Rattus_norvegicus
ENSMPUG00000009648	-	82	99.441	ENSRBIG00000002471	-	100	96.447	Rhinopithecus_bieti
ENSMPUG00000009648	-	100	99.492	ENSRROG00000029583	-	100	99.492	Rhinopithecus_roxellana
ENSMPUG00000009648	-	83	88.000	YDL140C	RPO21	99	80.180	Saccharomyces_cerevisiae
ENSMPUG00000009648	-	100	99.898	ENSSBOG00000000808	-	100	99.898	Saimiri_boliviensis_boliviensis
ENSMPUG00000009648	-	92	99.379	ENSSHAG00000002858	-	84	99.379	Sarcophilus_harrisii
ENSMPUG00000009648	-	82	94.544	ENSSFOG00015023275	polr2a	82	94.538	Scleropages_formosus
ENSMPUG00000009648	-	82	94.048	ENSSMAG00000009137	polr2a	82	94.041	Scophthalmus_maximus
ENSMPUG00000009648	-	82	94.420	ENSSDUG00000020466	polr2a	82	94.413	Seriola_dumerili
ENSMPUG00000009648	-	82	94.420	ENSSLDG00000020613	polr2a	82	94.413	Seriola_lalandi_dorsalis
ENSMPUG00000009648	-	97	94.916	ENSSARG00000005875	-	99	94.916	Sorex_araneus
ENSMPUG00000009648	-	100	94.482	ENSSPAG00000016741	polr2a	94	94.475	Stegastes_partitus
ENSMPUG00000009648	-	100	99.137	ENSSSCG00000028278	-	100	99.137	Sus_scrofa
ENSMPUG00000009648	-	99	88.600	ENSTRUG00000012320	polr2a	81	88.586	Takifugu_rubripes
ENSMPUG00000009648	-	99	92.932	ENSTNIG00000010136	polr2a	100	92.924	Tetraodon_nigroviridis
ENSMPUG00000009648	-	74	100.000	ENSTBEG00000013294	-	58	100.000	Tupaia_belangeri
ENSMPUG00000009648	-	100	98.325	ENSTTRG00000014273	-	100	98.325	Tursiops_truncatus
ENSMPUG00000009648	-	96	96.904	ENSUAMG00000014866	-	100	99.567	Ursus_americanus
ENSMPUG00000009648	-	99	97.386	ENSUMAG00000015732	-	100	97.386	Ursus_maritimus
ENSMPUG00000009648	-	65	100.000	ENSVPAG00000008842	-	76	100.000	Vicugna_pacos
ENSMPUG00000009648	-	100	96.604	ENSVVUG00000027878	-	100	98.528	Vulpes_vulpes
ENSMPUG00000009648	-	99	96.920	ENSXETG00000012465	polr2a	100	96.920	Xenopus_tropicalis
ENSMPUG00000009648	-	89	92.250	ENSXCOG00000001804	polr2a	94	92.241	Xiphophorus_couchianus
ENSMPUG00000009648	-	82	94.420	ENSXMAG00000015687	polr2a	82	94.413	Xiphophorus_maculatus