EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMPUG00000011810 (Gene tree)
Gene ID: -
Gene Symbol: YBX3
Alias: CSDA|CSDA1|ZONAB|dbpA
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Mustela_putorius_furo
Status: putative
Strand: Plus strand
Length: 23995 bases
Position: chrGL896948.1:12236607-12260601
Accession: 2428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMPUP00000011717	CSD	PF00313.22	8.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMPUT00000011909	YBX3-201	1174	-	ENSMPUP00000011717	379 (aa)	-	M3YK60

Gene Model

Click here to download ENSMPUG00000011810's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMPUG00000011810's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMPUG00000011810	YBX3	78	39.286	ENSMPUG00000013922	-	83	41.694
ENSMPUG00000011810	YBX3	98	33.854	ENSMPUG00000018977	-	64	33.858

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMPUG00000011810	YBX3	100	79.265	ENSG00000060138	YBX3	100	79.790	Homo_sapiens
ENSMPUG00000011810	YBX3	96	77.473	ENSAMEG00000009393	YBX3	95	80.636	Ailuropoda_melanoleuca
ENSMPUG00000011810	YBX3	77	51.370	ENSAPLG00000003147	YBX3	100	51.020	Anas_platyrhynchos
ENSMPUG00000011810	YBX3	90	78.198	ENSANAG00000024492	-	100	76.640	Aotus_nancymaae
ENSMPUG00000011810	YBX3	99	86.154	ENSANAG00000033366	-	93	86.154	Aotus_nancymaae
ENSMPUG00000011810	YBX3	100	71.756	ENSBTAG00000009663	YBX3	88	70.809	Bos_taurus
ENSMPUG00000011810	YBX3	67	89.286	ENSCJAG00000033824	-	98	91.892	Callithrix_jacchus
ENSMPUG00000011810	YBX3	100	78.215	ENSCJAG00000021660	-	100	78.740	Callithrix_jacchus
ENSMPUG00000011810	YBX3	78	77.627	ENSCAFG00000013401	YBX3	99	88.393	Canis_familiaris
ENSMPUG00000011810	YBX3	100	78.215	ENSCAFG00020006412	YBX3	100	77.690	Canis_lupus_dingo
ENSMPUG00000011810	YBX3	100	71.756	ENSCHIG00000010863	YBX3	100	70.712	Capra_hircus
ENSMPUG00000011810	YBX3	100	47.757	ENSTSYG00000035821	-	100	46.615	Carlito_syrichta
ENSMPUG00000011810	YBX3	78	77.966	ENSTSYG00000004204	-	85	93.750	Carlito_syrichta
ENSMPUG00000011810	YBX3	78	70.169	ENSCAPG00000015039	YBX3	93	70.847	Cavia_aperea
ENSMPUG00000011810	YBX3	79	71.523	ENSCPOG00000011329	YBX3	86	72.425	Cavia_porcellus
ENSMPUG00000011810	YBX3	100	78.740	ENSCCAG00000016469	YBX3	100	79.265	Cebus_capucinus
ENSMPUG00000011810	YBX3	100	78.740	ENSCATG00000034411	YBX3	100	79.265	Cercocebus_atys
ENSMPUG00000011810	YBX3	78	71.186	ENSCLAG00000016030	YBX3	94	71.864	Chinchilla_lanigera
ENSMPUG00000011810	YBX3	100	79.265	ENSCSAG00000008744	YBX3	100	79.790	Chlorocebus_sabaeus
ENSMPUG00000011810	YBX3	74	64.706	ENSCHOG00000011988	YBX3	58	88.889	Choloepus_hoffmanni
ENSMPUG00000011810	YBX3	78	63.300	ENSCPBG00000014147	YBX3	81	62.667	Chrysemys_picta_bellii
ENSMPUG00000011810	YBX3	80	76.898	ENSCANG00000036801	YBX3	93	78.073	Colobus_angolensis_palliatus
ENSMPUG00000011810	YBX3	85	75.385	ENSCGRG00001016148	Ybx3	100	70.000	Cricetulus_griseus_chok1gshd
ENSMPUG00000011810	YBX3	78	74.333	ENSCGRG00000004563	Ybx3	98	72.333	Cricetulus_griseus_crigri
ENSMPUG00000011810	YBX3	90	66.379	ENSDORG00000009103	Ybx3	81	73.898	Dipodomys_ordii
ENSMPUG00000011810	YBX3	77	67.577	ENSETEG00000002557	YBX3	99	67.354	Echinops_telfairi
ENSMPUG00000011810	YBX3	100	77.105	ENSEASG00005014726	YBX3	100	76.316	Equus_asinus_asinus
ENSMPUG00000011810	YBX3	100	78.892	ENSECAG00000013777	YBX3	100	78.892	Equus_caballus
ENSMPUG00000011810	YBX3	77	77.320	ENSEEUG00000010415	YBX3	99	78.351	Erinaceus_europaeus
ENSMPUG00000011810	YBX3	100	83.421	ENSFCAG00000027748	YBX3	100	84.211	Felis_catus
ENSMPUG00000011810	YBX3	77	51.536	ENSFALG00000003661	YBX3	100	48.299	Ficedula_albicollis
ENSMPUG00000011810	YBX3	78	68.475	ENSFDAG00000021192	YBX3	92	68.475	Fukomys_damarensis
ENSMPUG00000011810	YBX3	100	44.764	ENSGALG00000031890	YBX3	76	59.259	Gallus_gallus
ENSMPUG00000011810	YBX3	78	61.953	ENSGAGG00000017780	YBX3	81	61.667	Gopherus_agassizii
ENSMPUG00000011810	YBX3	100	79.528	ENSGGOG00000001352	YBX3	100	80.052	Gorilla_gorilla
ENSMPUG00000011810	YBX3	54	93.617	ENSHGLG00000015495	-	93	59.816	Heterocephalus_glaber_female
ENSMPUG00000011810	YBX3	82	62.857	ENSHGLG00000014798	-	86	63.607	Heterocephalus_glaber_female
ENSMPUG00000011810	YBX3	51	83.929	ENSHGLG00100003589	YBX3	86	83.929	Heterocephalus_glaber_male
ENSMPUG00000011810	YBX3	78	70.169	ENSSTOG00000002108	-	88	67.224	Ictidomys_tridecemlineatus
ENSMPUG00000011810	YBX3	93	73.654	ENSSTOG00000032577	-	94	72.911	Ictidomys_tridecemlineatus
ENSMPUG00000011810	YBX3	80	57.049	ENSJJAG00000014239	Ybx3	95	75.676	Jaculus_jaculus
ENSMPUG00000011810	YBX3	100	79.474	ENSLAFG00000017247	YBX3	100	79.211	Loxodonta_africana
ENSMPUG00000011810	YBX3	100	78.478	ENSMFAG00000039369	YBX3	100	79.003	Macaca_fascicularis
ENSMPUG00000011810	YBX3	87	76.877	ENSMMUG00000022469	YBX3	99	77.508	Macaca_mulatta
ENSMPUG00000011810	YBX3	100	78.478	ENSMNEG00000045109	YBX3	100	79.003	Macaca_nemestrina
ENSMPUG00000011810	YBX3	94	65.460	ENSMLEG00000033618	YBX3	75	83.036	Mandrillus_leucophaeus
ENSMPUG00000011810	YBX3	77	51.525	ENSMGAG00000014224	YBX3	100	58.824	Meleagris_gallopavo
ENSMPUG00000011810	YBX3	88	75.150	ENSMAUG00000012185	Ybx3	98	70.213	Mesocricetus_auratus
ENSMPUG00000011810	YBX3	100	78.947	ENSMICG00000038002	-	100	79.474	Microcebus_murinus
ENSMPUG00000011810	YBX3	92	81.111	ENSMICG00000031459	-	91	49.853	Microcebus_murinus
ENSMPUG00000011810	YBX3	82	76.527	ENSMOCG00000016291	Ybx3	95	74.086	Microtus_ochrogaster
ENSMPUG00000011810	YBX3	77	65.763	ENSMODG00000018248	YBX3	91	67.458	Monodelphis_domestica
ENSMPUG00000011810	YBX3	85	75.077	MGP_CAROLIEiJ_G0028947	Ybx3	100	71.053	Mus_caroli
ENSMPUG00000011810	YBX3	85	75.077	ENSMUSG00000030189	Ybx3	100	69.737	Mus_musculus
ENSMPUG00000011810	YBX3	85	75.692	MGP_PahariEiJ_G0022709	Ybx3	100	70.263	Mus_pahari
ENSMPUG00000011810	YBX3	85	75.385	MGP_SPRETEiJ_G0029994	Ybx3	100	70.000	Mus_spretus
ENSMPUG00000011810	YBX3	72	81.884	ENSMLUG00000007476	YBX3	100	81.522	Myotis_lucifugus
ENSMPUG00000011810	YBX3	85	73.620	ENSNGAG00000000710	Ybx3	100	66.418	Nannospalax_galili
ENSMPUG00000011810	YBX3	86	74.164	ENSNLEG00000034844	YBX3	91	75.076	Nomascus_leucogenys
ENSMPUG00000011810	YBX3	55	50.230	ENSMEUG00000002507	-	88	54.872	Notamacropus_eugenii
ENSMPUG00000011810	YBX3	86	70.427	ENSODEG00000017957	YBX3	94	71.341	Octodon_degus
ENSMPUG00000011810	YBX3	80	74.587	ENSOCUG00000001889	YBX3	85	74.751	Oryctolagus_cuniculus
ENSMPUG00000011810	YBX3	100	75.969	ENSOGAG00000013245	YBX3	100	76.744	Otolemur_garnettii
ENSMPUG00000011810	YBX3	80	66.667	ENSOARG00000020919	YBX3	99	66.000	Ovis_aries
ENSMPUG00000011810	YBX3	100	71.842	ENSPPAG00000039068	YBX3	82	78.405	Pan_paniscus
ENSMPUG00000011810	YBX3	100	83.158	ENSPPRG00000005859	YBX3	100	83.947	Panthera_pardus
ENSMPUG00000011810	YBX3	77	79.310	ENSPTIG00000005322	YBX3	81	78.571	Panthera_tigris_altaica
ENSMPUG00000011810	YBX3	100	79.319	ENSPTRG00000004681	YBX3	100	79.843	Pan_troglodytes
ENSMPUG00000011810	YBX3	100	78.478	ENSPANG00000010280	YBX3	100	79.003	Papio_anubis
ENSMPUG00000011810	YBX3	50	74.074	ENSPSIG00000009247	YBX3	97	66.667	Pelodiscus_sinensis
ENSMPUG00000011810	YBX3	87	75.227	ENSPEMG00000012132	-	99	71.125	Peromyscus_maniculatus_bairdii
ENSMPUG00000011810	YBX3	60	86.607	ENSPEMG00000010391	-	70	81.538	Peromyscus_maniculatus_bairdii
ENSMPUG00000011810	YBX3	70	68.914	ENSPCIG00000029949	YBX3	100	65.918	Phascolarctos_cinereus
ENSMPUG00000011810	YBX3	100	78.740	ENSPPYG00000004279	YBX3	100	79.265	Pongo_abelii
ENSMPUG00000011810	YBX3	79	72.667	ENSPCAG00000001397	YBX3	98	73.898	Procavia_capensis
ENSMPUG00000011810	YBX3	50	62.827	ENSPCOG00000011663	YBX3	100	69.030	Propithecus_coquereli
ENSMPUG00000011810	YBX3	100	68.504	ENSPVAG00000006740	YBX3	77	77.703	Pteropus_vampyrus
ENSMPUG00000011810	YBX3	85	75.692	ENSRNOG00000005480	Ybx3	100	70.263	Rattus_norvegicus
ENSMPUG00000011810	YBX3	100	78.215	ENSRBIG00000039208	YBX3	100	78.740	Rhinopithecus_bieti
ENSMPUG00000011810	YBX3	100	78.478	ENSRROG00000029638	YBX3	100	79.003	Rhinopithecus_roxellana
ENSMPUG00000011810	YBX3	100	62.341	ENSSBOG00000030573	YBX3	86	76.589	Saimiri_boliviensis_boliviensis
ENSMPUG00000011810	YBX3	77	66.667	ENSSHAG00000003262	YBX3	98	66.221	Sarcophilus_harrisii
ENSMPUG00000011810	YBX3	100	76.804	ENSSSCG00000000633	YBX3	100	80.412	Sus_scrofa
ENSMPUG00000011810	YBX3	77	52.041	ENSTGUG00000012047	YBX3	99	48.299	Taeniopygia_guttata
ENSMPUG00000011810	YBX3	100	72.105	ENSTBEG00000012570	YBX3	92	72.754	Tupaia_belangeri
ENSMPUG00000011810	YBX3	71	71.739	ENSTTRG00000008045	YBX3	100	74.453	Tursiops_truncatus
ENSMPUG00000011810	YBX3	75	75.439	ENSUAMG00000016662	YBX3	93	81.061	Ursus_americanus
ENSMPUG00000011810	YBX3	77	78.276	ENSUMAG00000016118	YBX3	94	78.571	Ursus_maritimus
ENSMPUG00000011810	YBX3	77	67.586	ENSVPAG00000000876	YBX3	99	67.586	Vicugna_pacos
ENSMPUG00000011810	YBX3	68	80.695	ENSVVUG00000004956	YBX3	93	81.467	Vulpes_vulpes
ENSMPUG00000011810	YBX3	78	45.215	ENSXETG00000016239	ybx3	92	41.083	Xenopus_tropicalis