EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMPUG00000012040 (Gene tree)
Gene ID: 101672132
Gene Symbol: XRN1
Alias: SEP1
Full Name: 5'-3' exoribonuclease 1
Gene Type: protein_coding
Species: Mustela_putorius_furo
Status: putative
Strand: Plus strand
Length: 99372 bases
Position: chrGL896943.1:5833326-5932697
Accession: 30654
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMPUP00000011948	XRN_N	PF03159.18	6.1e-96	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMPUT00000012143	XRN1-201	5121	-	ENSMPUP00000011948	1706 (aa)	-	M3YKU1

Gene Model

Click here to download ENSMPUG00000012040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMPUG00000012040's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMPUG00000012040	XRN1	100	93.146	ENSG00000114127	XRN1	100	98.788	Homo_sapiens
ENSMPUG00000012040	XRN1	95	73.431	ENSAPOG00000000622	xrn1	100	71.317	Acanthochromis_polyacanthus
ENSMPUG00000012040	XRN1	100	93.993	ENSAMEG00000012538	XRN1	100	93.993	Ailuropoda_melanoleuca
ENSMPUG00000012040	XRN1	95	72.927	ENSACIG00000001057	xrn1	97	62.840	Amphilophus_citrinellus
ENSMPUG00000012040	XRN1	100	61.678	ENSAOCG00000014097	xrn1	95	69.215	Amphiprion_ocellaris
ENSMPUG00000012040	XRN1	100	61.211	ENSAPEG00000006620	xrn1	98	63.291	Amphiprion_percula
ENSMPUG00000012040	XRN1	95	71.838	ENSATEG00000009752	xrn1	98	71.838	Anabas_testudineus
ENSMPUG00000012040	XRN1	99	75.721	ENSAPLG00000004905	XRN1	100	75.260	Anas_platyrhynchos
ENSMPUG00000012040	XRN1	100	72.443	ENSACAG00000004985	XRN1	100	72.163	Anolis_carolinensis
ENSMPUG00000012040	XRN1	100	93.263	ENSANAG00000029013	XRN1	99	96.117	Aotus_nancymaae
ENSMPUG00000012040	XRN1	100	60.540	ENSACLG00000004806	xrn1	95	62.249	Astatotilapia_calliptera
ENSMPUG00000012040	XRN1	99	60.788	ENSAMXG00000019370	xrn1	95	94.175	Astyanax_mexicanus
ENSMPUG00000012040	XRN1	100	93.907	ENSBTAG00000011524	XRN1	100	93.732	Bos_taurus
ENSMPUG00000012040	XRN1	70	39.117	WBGene00012730	xrn-1	83	38.791	Caenorhabditis_elegans
ENSMPUG00000012040	XRN1	100	93.204	ENSCJAG00000001872	XRN1	100	93.204	Callithrix_jacchus
ENSMPUG00000012040	XRN1	100	96.016	ENSCAFG00000007783	XRN1	100	96.016	Canis_familiaris
ENSMPUG00000012040	XRN1	100	94.323	ENSCAFG00020009120	XRN1	99	99.401	Canis_lupus_dingo
ENSMPUG00000012040	XRN1	99	90.930	ENSCHIG00000019192	XRN1	99	90.758	Capra_hircus
ENSMPUG00000012040	XRN1	100	92.623	ENSTSYG00000002705	XRN1	100	92.623	Carlito_syrichta
ENSMPUG00000012040	XRN1	100	93.732	ENSCCAG00000034800	XRN1	99	97.464	Cebus_capucinus
ENSMPUG00000012040	XRN1	100	93.673	ENSCATG00000041794	XRN1	100	93.673	Cercocebus_atys
ENSMPUG00000012040	XRN1	100	86.197	ENSCLAG00000001451	XRN1	99	96.038	Chinchilla_lanigera
ENSMPUG00000012040	XRN1	100	93.732	ENSCSAG00000011265	XRN1	100	93.732	Chlorocebus_sabaeus
ENSMPUG00000012040	XRN1	58	98.701	ENSCHOG00000013961	-	59	98.701	Choloepus_hoffmanni
ENSMPUG00000012040	XRN1	70	45.164	ENSCSAVG00000008584	-	98	44.774	Ciona_savignyi
ENSMPUG00000012040	XRN1	100	93.732	ENSCANG00000037495	XRN1	99	97.904	Colobus_angolensis_palliatus
ENSMPUG00000012040	XRN1	100	87.271	ENSCGRG00001019411	Xrn1	99	96.038	Cricetulus_griseus_chok1gshd
ENSMPUG00000012040	XRN1	100	87.271	ENSCGRG00000012464	Xrn1	99	96.038	Cricetulus_griseus_crigri
ENSMPUG00000012040	XRN1	100	56.047	ENSCSEG00000021285	xrn1	94	95.192	Cynoglossus_semilaevis
ENSMPUG00000012040	XRN1	66	68.130	ENSCVAG00000013089	xrn1	99	72.992	Cyprinodon_variegatus
ENSMPUG00000012040	XRN1	99	63.269	ENSDARG00000091652	xrn1	98	80.169	Danio_rerio
ENSMPUG00000012040	XRN1	100	86.982	ENSDORG00000013833	Xrn1	100	86.924	Dipodomys_ordii
ENSMPUG00000012040	XRN1	74	39.891	FBgn0020261	pcm	76	39.722	Drosophila_melanogaster
ENSMPUG00000012040	XRN1	86	100.000	ENSETEG00000003978	XRN1	88	99.194	Echinops_telfairi
ENSMPUG00000012040	XRN1	100	94.200	ENSEASG00005002687	XRN1	99	97.904	Equus_asinus_asinus
ENSMPUG00000012040	XRN1	100	94.200	ENSECAG00000008301	XRN1	100	94.200	Equus_caballus
ENSMPUG00000012040	XRN1	92	83.268	ENSEEUG00000011323	XRN1	92	83.268	Erinaceus_europaeus
ENSMPUG00000012040	XRN1	100	61.977	ENSELUG00000000169	xrn1	96	62.904	Esox_lucius
ENSMPUG00000012040	XRN1	100	91.862	ENSFCAG00000027589	XRN1	99	97.143	Felis_catus
ENSMPUG00000012040	XRN1	100	74.400	ENSFALG00000007021	XRN1	100	73.675	Ficedula_albicollis
ENSMPUG00000012040	XRN1	100	87.743	ENSFDAG00000020494	XRN1	99	95.563	Fukomys_damarensis
ENSMPUG00000012040	XRN1	84	68.509	ENSGMOG00000006396	xrn1	80	68.033	Gadus_morhua
ENSMPUG00000012040	XRN1	100	74.525	ENSGALG00000002706	XRN1	100	74.078	Gallus_gallus
ENSMPUG00000012040	XRN1	100	60.112	ENSGACG00000014328	xrn1	96	61.475	Gasterosteus_aculeatus
ENSMPUG00000012040	XRN1	94	78.219	ENSGAGG00000017535	XRN1	99	77.798	Gopherus_agassizii
ENSMPUG00000012040	XRN1	100	93.322	ENSGGOG00000008047	XRN1	100	93.322	Gorilla_gorilla
ENSMPUG00000012040	XRN1	100	60.663	ENSHBUG00000005908	xrn1	98	73.663	Haplochromis_burtoni
ENSMPUG00000012040	XRN1	100	88.552	ENSHGLG00000014476	XRN1	99	96.407	Heterocephalus_glaber_female
ENSMPUG00000012040	XRN1	100	88.552	ENSHGLG00100015130	XRN1	99	96.407	Heterocephalus_glaber_male
ENSMPUG00000012040	XRN1	96	71.314	ENSHCOG00000014062	xrn1	97	71.141	Hippocampus_comes
ENSMPUG00000012040	XRN1	99	62.379	ENSIPUG00000015229	xrn1	96	63.490	Ictalurus_punctatus
ENSMPUG00000012040	XRN1	100	90.831	ENSSTOG00000013552	XRN1	99	98.204	Ictidomys_tridecemlineatus
ENSMPUG00000012040	XRN1	98	85.822	ENSJJAG00000010863	Xrn1	99	94.311	Jaculus_jaculus
ENSMPUG00000012040	XRN1	94	61.427	ENSKMAG00000021356	xrn1	94	76.261	Kryptolebias_marmoratus
ENSMPUG00000012040	XRN1	100	60.202	ENSLBEG00000018656	xrn1	97	96.117	Labrus_bergylta
ENSMPUG00000012040	XRN1	100	69.479	ENSLACG00000009020	XRN1	97	70.246	Latimeria_chalumnae
ENSMPUG00000012040	XRN1	100	65.806	ENSLOCG00000007944	xrn1	98	65.967	Lepisosteus_oculatus
ENSMPUG00000012040	XRN1	63	96.352	ENSLAFG00000015426	XRN1	100	96.352	Loxodonta_africana
ENSMPUG00000012040	XRN1	100	93.790	ENSMFAG00000032599	XRN1	100	93.790	Macaca_fascicularis
ENSMPUG00000012040	XRN1	100	93.732	ENSMMUG00000014038	XRN1	100	93.732	Macaca_mulatta
ENSMPUG00000012040	XRN1	100	93.556	ENSMNEG00000034217	XRN1	100	93.556	Macaca_nemestrina
ENSMPUG00000012040	XRN1	94	71.293	ENSMAMG00000013219	xrn1	94	77.823	Mastacembelus_armatus
ENSMPUG00000012040	XRN1	100	60.506	ENSMZEG00005015099	xrn1	95	62.212	Maylandia_zebra
ENSMPUG00000012040	XRN1	99	74.784	ENSMGAG00000006333	XRN1	100	74.322	Meleagris_gallopavo
ENSMPUG00000012040	XRN1	100	93.337	ENSMICG00000048948	XRN1	96	100.000	Microcebus_murinus
ENSMPUG00000012040	XRN1	57	94.770	ENSMOCG00000008665	Xrn1	99	94.770	Microtus_ochrogaster
ENSMPUG00000012040	XRN1	100	82.672	ENSMODG00000021236	XRN1	100	82.322	Monodelphis_domestica
ENSMPUG00000012040	XRN1	100	57.216	ENSMALG00000004098	xrn1	96	58.091	Monopterus_albus
ENSMPUG00000012040	XRN1	96	95.261	MGP_CAROLIEiJ_G0032535	Xrn1	100	97.500	Mus_caroli
ENSMPUG00000012040	XRN1	100	86.067	ENSMUSG00000032410	Xrn1	100	97.500	Mus_musculus
ENSMPUG00000012040	XRN1	100	86.009	MGP_PahariEiJ_G0015404	Xrn1	100	97.500	Mus_pahari
ENSMPUG00000012040	XRN1	100	86.067	MGP_SPRETEiJ_G0033678	Xrn1	100	97.500	Mus_spretus
ENSMPUG00000012040	XRN1	100	90.086	ENSMLUG00000016885	XRN1	100	89.971	Myotis_lucifugus
ENSMPUG00000012040	XRN1	57	91.429	ENSNGAG00000023964	Xrn1	99	91.561	Nannospalax_galili
ENSMPUG00000012040	XRN1	100	93.673	ENSNLEG00000004726	XRN1	100	93.673	Nomascus_leucogenys
ENSMPUG00000012040	XRN1	76	98.969	ENSMEUG00000014473	-	77	99.029	Notamacropus_eugenii
ENSMPUG00000012040	XRN1	79	84.615	ENSOPRG00000007337	-	78	84.615	Ochotona_princeps
ENSMPUG00000012040	XRN1	100	61.981	ENSONIG00000016673	xrn1	99	64.997	Oreochromis_niloticus
ENSMPUG00000012040	XRN1	92	77.701	ENSOANG00000006735	XRN1	100	77.511	Ornithorhynchus_anatinus
ENSMPUG00000012040	XRN1	100	89.966	ENSOCUG00000001861	XRN1	100	89.794	Oryctolagus_cuniculus
ENSMPUG00000012040	XRN1	100	61.117	ENSORLG00000013005	xrn1	95	62.696	Oryzias_latipes
ENSMPUG00000012040	XRN1	100	61.212	ENSORLG00020005559	xrn1	100	61.203	Oryzias_latipes_hni
ENSMPUG00000012040	XRN1	100	60.779	ENSORLG00015022523	xrn1	92	65.553	Oryzias_latipes_hsok
ENSMPUG00000012040	XRN1	96	73.409	ENSOMEG00000015397	xrn1	100	73.246	Oryzias_melastigma
ENSMPUG00000012040	XRN1	100	90.398	ENSOGAG00000000170	XRN1	100	90.398	Otolemur_garnettii
ENSMPUG00000012040	XRN1	99	94.311	ENSOARG00000006343	XRN1	99	94.135	Ovis_aries
ENSMPUG00000012040	XRN1	100	93.322	ENSPPAG00000010180	XRN1	100	93.322	Pan_paniscus
ENSMPUG00000012040	XRN1	100	95.667	ENSPPRG00000007125	XRN1	100	95.667	Panthera_pardus
ENSMPUG00000012040	XRN1	100	95.609	ENSPTIG00000021081	XRN1	100	95.609	Panthera_tigris_altaica
ENSMPUG00000012040	XRN1	100	93.380	ENSPTRG00000015482	XRN1	100	93.380	Pan_troglodytes
ENSMPUG00000012040	XRN1	100	93.615	ENSPANG00000010638	XRN1	100	93.615	Papio_anubis
ENSMPUG00000012040	XRN1	100	76.474	ENSPSIG00000018050	XRN1	100	76.417	Pelodiscus_sinensis
ENSMPUG00000012040	XRN1	57	78.145	ENSPMGG00000002648	xrn1	98	77.778	Periophthalmus_magnuspinnatus
ENSMPUG00000012040	XRN1	57	95.721	ENSPEMG00000020610	Xrn1	99	95.721	Peromyscus_maniculatus_bairdii
ENSMPUG00000012040	XRN1	65	50.379	ENSPMAG00000002975	xrn1	91	78.161	Petromyzon_marinus
ENSMPUG00000012040	XRN1	100	81.983	ENSPCIG00000028735	XRN1	99	90.106	Phascolarctos_cinereus
ENSMPUG00000012040	XRN1	90	65.080	ENSPFOG00000013932	xrn1	99	65.360	Poecilia_formosa
ENSMPUG00000012040	XRN1	90	64.096	ENSPLAG00000021653	xrn1	99	64.498	Poecilia_latipinna
ENSMPUG00000012040	XRN1	88	64.346	ENSPMEG00000003076	xrn1	95	64.626	Poecilia_mexicana
ENSMPUG00000012040	XRN1	100	60.787	ENSPREG00000021147	xrn1	100	60.046	Poecilia_reticulata
ENSMPUG00000012040	XRN1	100	93.204	ENSPPYG00000014172	XRN1	100	93.204	Pongo_abelii
ENSMPUG00000012040	XRN1	90	81.930	ENSPCAG00000005638	XRN1	99	81.960	Procavia_capensis
ENSMPUG00000012040	XRN1	100	93.677	ENSPCOG00000013089	XRN1	99	98.204	Propithecus_coquereli
ENSMPUG00000012040	XRN1	96	92.975	ENSPVAG00000016265	XRN1	96	92.975	Pteropus_vampyrus
ENSMPUG00000012040	XRN1	100	61.424	ENSPNYG00000010570	xrn1	95	63.136	Pundamilia_nyererei
ENSMPUG00000012040	XRN1	99	60.720	ENSPNAG00000023531	xrn1	97	61.629	Pygocentrus_nattereri
ENSMPUG00000012040	XRN1	100	86.812	ENSRNOG00000042951	Xrn1	100	86.697	Rattus_norvegicus
ENSMPUG00000012040	XRN1	100	93.146	ENSRBIG00000041227	XRN1	100	93.146	Rhinopithecus_bieti
ENSMPUG00000012040	XRN1	69	33.987	YGL173C	XRN1	73	54.496	Saccharomyces_cerevisiae
ENSMPUG00000012040	XRN1	100	93.263	ENSSBOG00000029561	XRN1	100	93.263	Saimiri_boliviensis_boliviensis
ENSMPUG00000012040	XRN1	99	82.189	ENSSHAG00000016207	XRN1	100	81.834	Sarcophilus_harrisii
ENSMPUG00000012040	XRN1	100	61.416	ENSSFOG00015024211	xrn1	97	62.352	Scleropages_formosus
ENSMPUG00000012040	XRN1	93	72.720	ENSSMAG00000016534	xrn1	94	72.536	Scophthalmus_maximus
ENSMPUG00000012040	XRN1	91	72.742	ENSSDUG00000010306	xrn1	92	72.742	Seriola_dumerili
ENSMPUG00000012040	XRN1	94	72.293	ENSSLDG00000021543	xrn1	96	72.293	Seriola_lalandi_dorsalis
ENSMPUG00000012040	XRN1	67	85.212	ENSSARG00000007741	-	83	85.212	Sorex_araneus
ENSMPUG00000012040	XRN1	100	77.294	ENSTGUG00000008498	XRN1	100	76.655	Taeniopygia_guttata
ENSMPUG00000012040	XRN1	100	58.871	ENSTRUG00000004895	xrn1	96	77.848	Takifugu_rubripes
ENSMPUG00000012040	XRN1	96	68.095	ENSTNIG00000017615	xrn1	96	60.239	Tetraodon_nigroviridis
ENSMPUG00000012040	XRN1	84	97.035	ENSTBEG00000003256	XRN1	84	97.035	Tupaia_belangeri
ENSMPUG00000012040	XRN1	100	90.393	ENSTTRG00000012914	XRN1	100	90.158	Tursiops_truncatus
ENSMPUG00000012040	XRN1	100	95.785	ENSUAMG00000001608	XRN1	99	99.401	Ursus_americanus
ENSMPUG00000012040	XRN1	100	97.658	ENSUMAG00000013625	XRN1	100	97.658	Ursus_maritimus
ENSMPUG00000012040	XRN1	100	91.852	ENSVPAG00000004690	XRN1	100	91.852	Vicugna_pacos
ENSMPUG00000012040	XRN1	100	97.129	ENSVVUG00000024461	XRN1	99	99.401	Vulpes_vulpes
ENSMPUG00000012040	XRN1	100	68.934	ENSXETG00000000619	xrn1	97	89.247	Xenopus_tropicalis
ENSMPUG00000012040	XRN1	100	61.248	ENSXCOG00000007917	xrn1	95	63.136	Xiphophorus_couchianus
ENSMPUG00000012040	XRN1	92	72.349	ENSXMAG00000018320	xrn1	92	72.920	Xiphophorus_maculatus