EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMPUG00000013046 (Gene tree)
Gene ID: 101672678
Gene Symbol: SMG6
Alias: C17orf31|EST1A|KIAA0732|SMG-6
Full Name: SMG6%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Mustela_putorius_furo
Status: putative
Strand: Plus strand
Length: 248652 bases
Position: chrGL896917.1:860020-1108671
Accession: 101672678
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMPUP00000012947	EST1	PF10374.9	2.3e-15	1	1
ENSMPUP00000012947	EST1_DNA_bind	PF10373.9	1.9e-60	1	1
ENSMPUP00000012947	PIN_4	PF13638.6	1.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMPUT00000013156	SMG6-201	8786	-	ENSMPUP00000012947	1413 (aa)	XP_004746897	M3YNP0

Gene Model

Click here to download ENSMPUG00000013046's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMPUG00000013046's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMPUG00000013046	SMG6	100	92.953	ENSG00000070366	SMG6	100	97.260	Homo_sapiens
ENSMPUG00000013046	SMG6	89	53.097	ENSAPOG00000019448	smg6	78	53.422	Acanthochromis_polyacanthus
ENSMPUG00000013046	SMG6	100	97.246	ENSAMEG00000007632	SMG6	100	97.246	Ailuropoda_melanoleuca
ENSMPUG00000013046	SMG6	72	60.386	ENSACIG00000012997	smg6	78	55.680	Amphilophus_citrinellus
ENSMPUG00000013046	SMG6	83	55.067	ENSAPEG00000019101	smg6	74	55.339	Amphiprion_percula
ENSMPUG00000013046	SMG6	83	55.208	ENSATEG00000006483	smg6	76	54.018	Anabas_testudineus
ENSMPUG00000013046	SMG6	87	57.154	ENSACAG00000011783	SMG6	99	58.491	Anolis_carolinensis
ENSMPUG00000013046	SMG6	100	93.094	ENSANAG00000035760	SMG6	100	93.094	Aotus_nancymaae
ENSMPUG00000013046	SMG6	72	59.467	ENSACLG00000005288	smg6	80	55.495	Astatotilapia_calliptera
ENSMPUG00000013046	SMG6	69	63.333	ENSAMXG00000017326	smg6	99	50.383	Astyanax_mexicanus
ENSMPUG00000013046	SMG6	100	94.834	ENSBTAG00000000267	SMG6	100	94.834	Bos_taurus
ENSMPUG00000013046	SMG6	100	92.671	ENSCJAG00000001820	SMG6	100	92.671	Callithrix_jacchus
ENSMPUG00000013046	SMG6	100	96.815	ENSCAFG00000019260	SMG6	100	96.815	Canis_familiaris
ENSMPUG00000013046	SMG6	100	96.815	ENSCAFG00020009770	SMG6	100	96.815	Canis_lupus_dingo
ENSMPUG00000013046	SMG6	100	94.338	ENSCHIG00000021998	SMG6	100	94.338	Capra_hircus
ENSMPUG00000013046	SMG6	100	92.953	ENSTSYG00000003406	SMG6	100	97.065	Carlito_syrichta
ENSMPUG00000013046	SMG6	98	77.289	ENSCAPG00000016197	SMG6	99	82.904	Cavia_aperea
ENSMPUG00000013046	SMG6	100	90.915	ENSCPOG00000014878	SMG6	100	90.915	Cavia_porcellus
ENSMPUG00000013046	SMG6	100	93.305	ENSCCAG00000035801	SMG6	100	93.305	Cebus_capucinus
ENSMPUG00000013046	SMG6	100	93.094	ENSCATG00000031956	SMG6	100	93.094	Cercocebus_atys
ENSMPUG00000013046	SMG6	100	92.671	ENSCLAG00000006748	SMG6	100	92.671	Chinchilla_lanigera
ENSMPUG00000013046	SMG6	100	93.658	ENSCSAG00000013800	SMG6	100	93.658	Chlorocebus_sabaeus
ENSMPUG00000013046	SMG6	52	95.522	ENSCHOG00000005024	-	66	95.522	Choloepus_hoffmanni
ENSMPUG00000013046	SMG6	100	72.917	ENSCPBG00000020369	SMG6	100	73.472	Chrysemys_picta_bellii
ENSMPUG00000013046	SMG6	98	93.213	ENSCANG00000031764	SMG6	100	96.477	Colobus_angolensis_palliatus
ENSMPUG00000013046	SMG6	55	87.852	ENSCGRG00001019595	Smg6	100	87.852	Cricetulus_griseus_chok1gshd
ENSMPUG00000013046	SMG6	98	84.910	ENSCGRG00000007782	Smg6	99	85.126	Cricetulus_griseus_crigri
ENSMPUG00000013046	SMG6	86	54.376	ENSCSEG00000012757	smg6	80	54.743	Cynoglossus_semilaevis
ENSMPUG00000013046	SMG6	72	57.738	ENSCVAG00000012789	smg6	74	54.050	Cyprinodon_variegatus
ENSMPUG00000013046	SMG6	96	55.840	ENSDARG00000100481	smg6	91	56.557	Danio_rerio
ENSMPUG00000013046	SMG6	100	93.587	ENSDNOG00000048283	SMG6	100	93.587	Dasypus_novemcinctus
ENSMPUG00000013046	SMG6	100	89.123	ENSDORG00000016614	Smg6	94	97.748	Dipodomys_ordii
ENSMPUG00000013046	SMG6	93	97.619	ENSETEG00000016790	SMG6	93	97.619	Echinops_telfairi
ENSMPUG00000013046	SMG6	74	50.292	ENSEBUG00000005059	smg6	71	49.856	Eptatretus_burgeri
ENSMPUG00000013046	SMG6	99	95.889	ENSEASG00005009318	SMG6	99	95.889	Equus_asinus_asinus
ENSMPUG00000013046	SMG6	99	95.606	ENSECAG00000006519	SMG6	99	95.606	Equus_caballus
ENSMPUG00000013046	SMG6	100	83.652	ENSEEUG00000003493	SMG6	100	83.652	Erinaceus_europaeus
ENSMPUG00000013046	SMG6	72	60.463	ENSELUG00000005934	smg6	67	56.850	Esox_lucius
ENSMPUG00000013046	SMG6	100	97.665	ENSFCAG00000028817	SMG6	100	97.665	Felis_catus
ENSMPUG00000013046	SMG6	98	72.967	ENSFALG00000006538	SMG6	99	73.110	Ficedula_albicollis
ENSMPUG00000013046	SMG6	100	92.248	ENSFDAG00000015106	SMG6	100	92.248	Fukomys_damarensis
ENSMPUG00000013046	SMG6	83	53.235	ENSFHEG00000013282	smg6	75	53.738	Fundulus_heteroclitus
ENSMPUG00000013046	SMG6	53	69.159	ENSGMOG00000019077	smg6	58	69.159	Gadus_morhua
ENSMPUG00000013046	SMG6	100	72.388	ENSGALG00000003108	SMG6	98	72.507	Gallus_gallus
ENSMPUG00000013046	SMG6	83	53.997	ENSGAFG00000000379	smg6	74	54.346	Gambusia_affinis
ENSMPUG00000013046	SMG6	91	54.058	ENSGACG00000020521	smg6	99	53.886	Gasterosteus_aculeatus
ENSMPUG00000013046	SMG6	98	72.721	ENSGAGG00000025617	SMG6	99	73.291	Gopherus_agassizii
ENSMPUG00000013046	SMG6	100	93.728	ENSGGOG00000017156	SMG6	100	93.728	Gorilla_gorilla
ENSMPUG00000013046	SMG6	72	59.633	ENSHBUG00000021311	smg6	74	55.765	Haplochromis_burtoni
ENSMPUG00000013046	SMG6	100	91.837	ENSHGLG00000012882	SMG6	100	91.837	Heterocephalus_glaber_female
ENSMPUG00000013046	SMG6	100	91.907	ENSHGLG00100017815	SMG6	100	91.907	Heterocephalus_glaber_male
ENSMPUG00000013046	SMG6	77	56.437	ENSHCOG00000008761	smg6	97	54.140	Hippocampus_comes
ENSMPUG00000013046	SMG6	85	54.796	ENSIPUG00000012493	smg6	76	54.710	Ictalurus_punctatus
ENSMPUG00000013046	SMG6	100	93.798	ENSSTOG00000028127	SMG6	100	93.798	Ictidomys_tridecemlineatus
ENSMPUG00000013046	SMG6	79	88.929	ENSJJAG00000015367	Smg6	95	86.990	Jaculus_jaculus
ENSMPUG00000013046	SMG6	78	55.178	ENSKMAG00000000279	smg6	78	52.726	Kryptolebias_marmoratus
ENSMPUG00000013046	SMG6	55	58.612	ENSLACG00000000806	-	98	59.727	Latimeria_chalumnae
ENSMPUG00000013046	SMG6	73	65.295	ENSLOCG00000006448	smg6	99	55.725	Lepisosteus_oculatus
ENSMPUG00000013046	SMG6	100	93.235	ENSLAFG00000001261	SMG6	100	93.235	Loxodonta_africana
ENSMPUG00000013046	SMG6	100	93.587	ENSMFAG00000003394	SMG6	100	93.587	Macaca_fascicularis
ENSMPUG00000013046	SMG6	100	93.517	ENSMMUG00000023161	SMG6	100	93.517	Macaca_mulatta
ENSMPUG00000013046	SMG6	100	88.545	ENSMNEG00000044592	SMG6	100	88.545	Macaca_nemestrina
ENSMPUG00000013046	SMG6	99	90.753	ENSMLEG00000029353	SMG6	99	96.617	Mandrillus_leucophaeus
ENSMPUG00000013046	SMG6	83	55.912	ENSMAMG00000020119	smg6	79	56.025	Mastacembelus_armatus
ENSMPUG00000013046	SMG6	72	59.522	ENSMZEG00005024736	smg6	74	55.425	Maylandia_zebra
ENSMPUG00000013046	SMG6	73	67.137	ENSMGAG00000005401	-	99	67.137	Meleagris_gallopavo
ENSMPUG00000013046	SMG6	100	94.926	ENSMICG00000012913	SMG6	100	94.926	Microcebus_murinus
ENSMPUG00000013046	SMG6	100	48.172	ENSMMOG00000010883	smg6	100	48.405	Mola_mola
ENSMPUG00000013046	SMG6	100	86.779	ENSMODG00000010622	SMG6	100	86.779	Monodelphis_domestica
ENSMPUG00000013046	SMG6	83	54.844	ENSMALG00000001106	smg6	73	55.495	Monopterus_albus
ENSMPUG00000013046	SMG6	100	91.402	MGP_CAROLIEiJ_G0016729	Smg6	98	94.813	Mus_caroli
ENSMPUG00000013046	SMG6	100	91.191	ENSMUSG00000038290	Smg6	97	94.524	Mus_musculus
ENSMPUG00000013046	SMG6	100	90.903	MGP_PahariEiJ_G0017866	Smg6	98	93.948	Mus_pahari
ENSMPUG00000013046	SMG6	100	91.121	MGP_SPRETEiJ_G0017572	Smg6	98	94.813	Mus_spretus
ENSMPUG00000013046	SMG6	100	94.409	ENSMLUG00000005739	SMG6	100	94.409	Myotis_lucifugus
ENSMPUG00000013046	SMG6	98	91.329	ENSNGAG00000007287	Smg6	99	91.329	Nannospalax_galili
ENSMPUG00000013046	SMG6	72	59.537	ENSNBRG00000009511	smg6	81	54.874	Neolamprologus_brichardi
ENSMPUG00000013046	SMG6	98	93.113	ENSNLEG00000017171	SMG6	100	97.065	Nomascus_leucogenys
ENSMPUG00000013046	SMG6	98	82.925	ENSMEUG00000015804	SMG6	99	82.925	Notamacropus_eugenii
ENSMPUG00000013046	SMG6	62	92.308	ENSOPRG00000000579	SMG6	85	98.421	Ochotona_princeps
ENSMPUG00000013046	SMG6	100	85.574	ENSODEG00000008038	SMG6	100	85.574	Octodon_degus
ENSMPUG00000013046	SMG6	100	50.496	ENSONIG00000005594	smg6	100	51.805	Oreochromis_niloticus
ENSMPUG00000013046	SMG6	100	92.892	ENSOCUG00000013018	SMG6	100	93.033	Oryctolagus_cuniculus
ENSMPUG00000013046	SMG6	83	54.295	ENSORLG00000003317	smg6	74	55.024	Oryzias_latipes
ENSMPUG00000013046	SMG6	83	54.380	ENSORLG00020015343	smg6	74	54.717	Oryzias_latipes_hni
ENSMPUG00000013046	SMG6	83	54.252	ENSORLG00015020454	smg6	74	54.980	Oryzias_latipes_hsok
ENSMPUG00000013046	SMG6	83	53.785	ENSOMEG00000010838	smg6	75	54.046	Oryzias_melastigma
ENSMPUG00000013046	SMG6	100	93.803	ENSOGAG00000004483	SMG6	100	93.803	Otolemur_garnettii
ENSMPUG00000013046	SMG6	100	92.731	ENSOARG00000015076	SMG6	100	94.211	Ovis_aries
ENSMPUG00000013046	SMG6	100	93.728	ENSPPAG00000043296	SMG6	100	93.728	Pan_paniscus
ENSMPUG00000013046	SMG6	100	97.735	ENSPPRG00000014581	SMG6	100	97.735	Panthera_pardus
ENSMPUG00000013046	SMG6	98	97.686	ENSPTIG00000008925	SMG6	100	99.217	Panthera_tigris_altaica
ENSMPUG00000013046	SMG6	100	93.658	ENSPTRG00000008544	SMG6	100	97.260	Pan_troglodytes
ENSMPUG00000013046	SMG6	100	93.376	ENSPANG00000024588	SMG6	100	93.376	Papio_anubis
ENSMPUG00000013046	SMG6	89	71.182	ENSPSIG00000006660	SMG6	96	71.261	Pelodiscus_sinensis
ENSMPUG00000013046	SMG6	100	50.066	ENSPMGG00000000844	smg6	100	60.870	Periophthalmus_magnuspinnatus
ENSMPUG00000013046	SMG6	100	92.178	ENSPEMG00000020707	Smg6	100	92.178	Peromyscus_maniculatus_bairdii
ENSMPUG00000013046	SMG6	100	51.301	ENSPFOG00000012035	smg6	100	51.777	Poecilia_formosa
ENSMPUG00000013046	SMG6	77	56.555	ENSPLAG00000017660	smg6	74	54.389	Poecilia_latipinna
ENSMPUG00000013046	SMG6	83	53.816	ENSPMEG00000000258	smg6	74	54.745	Poecilia_mexicana
ENSMPUG00000013046	SMG6	83	54.310	ENSPREG00000010066	smg6	74	54.346	Poecilia_reticulata
ENSMPUG00000013046	SMG6	100	88.397	ENSPPYG00000007790	SMG6	100	88.397	Pongo_abelii
ENSMPUG00000013046	SMG6	100	88.724	ENSPCAG00000000552	SMG6	100	88.724	Procavia_capensis
ENSMPUG00000013046	SMG6	100	94.362	ENSPCOG00000020925	SMG6	100	94.362	Propithecus_coquereli
ENSMPUG00000013046	SMG6	86	96.552	ENSPVAG00000002159	SMG6	86	96.552	Pteropus_vampyrus
ENSMPUG00000013046	SMG6	72	61.759	ENSPNYG00000024151	smg6	79	57.386	Pundamilia_nyererei
ENSMPUG00000013046	SMG6	87	52.009	ENSPNAG00000015480	smg6	88	63.063	Pygocentrus_nattereri
ENSMPUG00000013046	SMG6	100	91.402	ENSRNOG00000003041	Smg6	97	95.389	Rattus_norvegicus
ENSMPUG00000013046	SMG6	100	93.164	ENSRBIG00000024746	SMG6	100	93.164	Rhinopithecus_bieti
ENSMPUG00000013046	SMG6	100	93.235	ENSRROG00000030423	SMG6	100	96.086	Rhinopithecus_roxellana
ENSMPUG00000013046	SMG6	100	93.094	ENSSBOG00000022518	SMG6	100	91.402	Saimiri_boliviensis_boliviensis
ENSMPUG00000013046	SMG6	99	85.847	ENSSHAG00000010045	SMG6	98	85.847	Sarcophilus_harrisii
ENSMPUG00000013046	SMG6	72	62.698	ENSSFOG00015005436	smg6	70	57.480	Scleropages_formosus
ENSMPUG00000013046	SMG6	83	55.642	ENSSMAG00000019777	smg6	73	55.564	Scophthalmus_maximus
ENSMPUG00000013046	SMG6	89	52.881	ENSSDUG00000016412	smg6	79	52.928	Seriola_dumerili
ENSMPUG00000013046	SMG6	86	52.223	ENSSLDG00000020747	smg6	83	51.982	Seriola_lalandi_dorsalis
ENSMPUG00000013046	SMG6	99	70.539	ENSSPUG00000007152	SMG6	99	70.469	Sphenodon_punctatus
ENSMPUG00000013046	SMG6	72	59.103	ENSSPAG00000015633	smg6	74	55.024	Stegastes_partitus
ENSMPUG00000013046	SMG6	100	94.767	ENSSSCG00000017826	SMG6	100	94.767	Sus_scrofa
ENSMPUG00000013046	SMG6	100	73.001	ENSTGUG00000005836	SMG6	100	73.212	Taeniopygia_guttata
ENSMPUG00000013046	SMG6	83	54.893	ENSTRUG00000000358	smg6	81	55.591	Takifugu_rubripes
ENSMPUG00000013046	SMG6	100	50.263	ENSTNIG00000016164	smg6	100	50.395	Tetraodon_nigroviridis
ENSMPUG00000013046	SMG6	100	89.077	ENSTBEG00000011424	SMG6	100	89.077	Tupaia_belangeri
ENSMPUG00000013046	SMG6	91	92.273	ENSTTRG00000001175	SMG6	91	92.273	Tursiops_truncatus
ENSMPUG00000013046	SMG6	100	97.599	ENSUAMG00000025152	SMG6	100	97.599	Ursus_americanus
ENSMPUG00000013046	SMG6	98	97.829	ENSUMAG00000009306	SMG6	100	97.829	Ursus_maritimus
ENSMPUG00000013046	SMG6	85	100.000	ENSVPAG00000000225	SMG6	88	100.000	Vicugna_pacos
ENSMPUG00000013046	SMG6	100	96.815	ENSVVUG00000021727	SMG6	100	96.815	Vulpes_vulpes
ENSMPUG00000013046	SMG6	98	59.056	ENSXETG00000023799	SMG6	99	58.873	Xenopus_tropicalis
ENSMPUG00000013046	SMG6	83	55.156	ENSXCOG00000009867	smg6	74	55.076	Xiphophorus_couchianus
ENSMPUG00000013046	SMG6	83	54.624	ENSXMAG00000010321	smg6	74	54.581	Xiphophorus_maculatus