EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMPUG00000013213 (Gene tree)
Gene ID
101676865
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Mustela_putorius_furo
Status
putative
Strand
Plus strand
Length
46518 bases
Position
chrGL896914.1:6193525-6240042
Accession
101676865
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMPUP00000013115CPSF73-100_CPF11718.82.1e-5411
ENSMPUP00000013115Beta-CaspPF10996.83.5e-3411
ENSMPUP00000013115Lactamase_BPF00753.277.9e-1911
ENSMPUP00000013115RMMBLPF07521.129.1e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMPUT00000013326CPSF3-2013563-ENSMPUP00000013115684 (aa)XP_004745819M3YP58
Gene Model
Click here to download ENSMPUG00000013213's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMPUG00000013213's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMPUG00000013213CPSF36737.578ENSMPUG00000014311INTS118137.578
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMPUG00000013213CPSF310098.977ENSG00000119203CPSF3100100.000Homo_sapiens
ENSMPUG00000013213CPSF37396.994ENSAPOG00000012241CPSF39096.982Acanthochromis_polyacanthus
ENSMPUG00000013213CPSF39985.441ENSAPOG00000022087cpsf39885.441Acanthochromis_polyacanthus
ENSMPUG00000013213CPSF310099.269ENSAMEG00000008493CPSF310099.269Ailuropoda_melanoleuca
ENSMPUG00000013213CPSF39282.989ENSACIG00000009846cpsf39982.989Amphilophus_citrinellus
ENSMPUG00000013213CPSF39286.645ENSACIG00000023663CPSF39986.645Amphilophus_citrinellus
ENSMPUG00000013213CPSF39985.588ENSAOCG00000022056cpsf39491.156Amphiprion_ocellaris
ENSMPUG00000013213CPSF39988.218ENSAOCG00000010077CPSF39888.218Amphiprion_ocellaris
ENSMPUG00000013213CPSF39988.218ENSAPEG00000021167CPSF39888.218Amphiprion_percula
ENSMPUG00000013213CPSF39985.735ENSAPEG00000019526cpsf39786.883Amphiprion_percula
ENSMPUG00000013213CPSF39985.567ENSATEG00000003959cpsf39885.567Anabas_testudineus
ENSMPUG00000013213CPSF39983.358ENSATEG00000014525CPSF39883.358Anabas_testudineus
ENSMPUG00000013213CPSF39895.238ENSAPLG00000006941CPSF39895.238Anas_platyrhynchos
ENSMPUG00000013213CPSF39392.902ENSACAG00000001759CPSF39992.902Anolis_carolinensis
ENSMPUG00000013213CPSF310092.105ENSANAG00000031254CPSF310092.105Aotus_nancymaae
ENSMPUG00000013213CPSF39286.486ENSACLG00000018846CPSF39986.486Astatotilapia_calliptera
ENSMPUG00000013213CPSF39786.036ENSACLG00000014484cpsf39986.036Astatotilapia_calliptera
ENSMPUG00000013213CPSF39987.923ENSAMXG00000004786cpsf39887.923Astyanax_mexicanus
ENSMPUG00000013213CPSF310099.123ENSBTAG00000019735CPSF310099.123Bos_taurus
ENSMPUG00000013213CPSF39159.370WBGene00013460cpsf-38959.370Caenorhabditis_elegans
ENSMPUG00000013213CPSF310098.684ENSCJAG00000006276CPSF310098.684Callithrix_jacchus
ENSMPUG00000013213CPSF310099.269ENSCAFG00000003375CPSF39599.269Canis_familiaris
ENSMPUG00000013213CPSF39099.677ENSCAFG00020026799CPSF310099.677Canis_lupus_dingo
ENSMPUG00000013213CPSF310099.123ENSCHIG00000013973CPSF310099.123Capra_hircus
ENSMPUG00000013213CPSF310098.684ENSTSYG00000002967CPSF310098.684Carlito_syrichta
ENSMPUG00000013213CPSF39897.301ENSCAPG00000013851CPSF310097.301Cavia_aperea
ENSMPUG00000013213CPSF310097.368ENSCPOG00000011299CPSF310097.368Cavia_porcellus
ENSMPUG00000013213CPSF310098.538ENSCCAG00000036730CPSF310098.538Cebus_capucinus
ENSMPUG00000013213CPSF310096.058ENSCATG00000014770CPSF39999.828Cercocebus_atys
ENSMPUG00000013213CPSF310097.222ENSCLAG00000002727CPSF310097.222Chinchilla_lanigera
ENSMPUG00000013213CPSF310090.936ENSCSAG00000007125CPSF310090.936Chlorocebus_sabaeus
ENSMPUG00000013213CPSF386100.000ENSCHOG00000000180CPSF38571.404Choloepus_hoffmanni
ENSMPUG00000013213CPSF39995.448ENSCPBG00000014074CPSF39995.448Chrysemys_picta_bellii
ENSMPUG00000013213CPSF39968.129ENSCING00000007214-9768.129Ciona_intestinalis
ENSMPUG00000013213CPSF310085.673ENSCANG00000034435CPSF310085.673Colobus_angolensis_palliatus
ENSMPUG00000013213CPSF310098.392ENSCGRG00001013134Cpsf310098.392Cricetulus_griseus_chok1gshd
ENSMPUG00000013213CPSF310098.392ENSCGRG00000018319Cpsf310098.392Cricetulus_griseus_crigri
ENSMPUG00000013213CPSF39986.912ENSCSEG00000002021CPSF39986.687Cynoglossus_semilaevis
ENSMPUG00000013213CPSF39988.513ENSCVAG00000015067CPSF39888.513Cyprinodon_variegatus
ENSMPUG00000013213CPSF39988.660ENSDARG00000027649cpsf39888.660Danio_rerio
ENSMPUG00000013213CPSF310097.226ENSDNOG00000008940CPSF39597.226Dasypus_novemcinctus
ENSMPUG00000013213CPSF39598.771ENSDORG00000014263Cpsf310098.771Dipodomys_ordii
ENSMPUG00000013213CPSF39967.155FBgn0261065Cpsf739967.155Drosophila_melanogaster
ENSMPUG00000013213CPSF39585.561ENSETEG00000003893CPSF310085.561Echinops_telfairi
ENSMPUG00000013213CPSF39978.766ENSEBUG00000009018cpsf39878.910Eptatretus_burgeri
ENSMPUG00000013213CPSF310099.269ENSEASG00005003970CPSF310099.269Equus_asinus_asinus
ENSMPUG00000013213CPSF310099.269ENSECAG00000019911CPSF310099.269Equus_caballus
ENSMPUG00000013213CPSF310083.333ENSEEUG00000015422CPSF310083.333Erinaceus_europaeus
ENSMPUG00000013213CPSF39988.253ENSELUG00000013775cpsf39988.253Esox_lucius
ENSMPUG00000013213CPSF310099.123ENSFCAG00000007852CPSF310099.123Felis_catus
ENSMPUG00000013213CPSF39595.363ENSFALG00000006572CPSF310095.363Ficedula_albicollis
ENSMPUG00000013213CPSF39996.779ENSFDAG00000006317CPSF39996.779Fukomys_damarensis
ENSMPUG00000013213CPSF35968.949ENSFHEG00000012186CPSF39968.949Fundulus_heteroclitus
ENSMPUG00000013213CPSF39985.147ENSFHEG00000014774cpsf39885.147Fundulus_heteroclitus
ENSMPUG00000013213CPSF39986.745ENSGMOG00000003157cpsf39886.745Gadus_morhua
ENSMPUG00000013213CPSF39994.714ENSGALG00000016424CPSF39994.714Gallus_gallus
ENSMPUG00000013213CPSF39282.962ENSGAFG00000019449cpsf39982.962Gambusia_affinis
ENSMPUG00000013213CPSF39988.529ENSGAFG00000008016CPSF39888.529Gambusia_affinis
ENSMPUG00000013213CPSF36893.362ENSGAGG00000025583CPSF39393.362Gopherus_agassizii
ENSMPUG00000013213CPSF310096.423ENSGGOG00000001757CPSF310098.740Gorilla_gorilla
ENSMPUG00000013213CPSF39985.924ENSHBUG00000001188cpsf39985.924Haplochromis_burtoni
ENSMPUG00000013213CPSF35981.436ENSHBUG00000014332CPSF39981.436Haplochromis_burtoni
ENSMPUG00000013213CPSF310096.930ENSHGLG00000000666CPSF39996.930Heterocephalus_glaber_female
ENSMPUG00000013213CPSF310096.930ENSHGLG00100007765CPSF39996.930Heterocephalus_glaber_male
ENSMPUG00000013213CPSF39985.022ENSHCOG00000007251cpsf39985.022Hippocampus_comes
ENSMPUG00000013213CPSF39986.598ENSHCOG00000015957CPSF39786.598Hippocampus_comes
ENSMPUG00000013213CPSF39987.187ENSIPUG00000023488cpsf39887.187Ictalurus_punctatus
ENSMPUG00000013213CPSF310098.684ENSSTOG00000004476CPSF310098.684Ictidomys_tridecemlineatus
ENSMPUG00000013213CPSF310097.368ENSJJAG00000023415Cpsf310097.368Jaculus_jaculus
ENSMPUG00000013213CPSF39987.776ENSKMAG00000007317CPSF39887.776Kryptolebias_marmoratus
ENSMPUG00000013213CPSF39984.728ENSKMAG00000002806cpsf39984.728Kryptolebias_marmoratus
ENSMPUG00000013213CPSF35580.161ENSLBEG00000015018-9980.161Labrus_bergylta
ENSMPUG00000013213CPSF39589.352ENSLBEG00000013492CPSF39889.352Labrus_bergylta
ENSMPUG00000013213CPSF39979.179ENSLBEG00000020569cpsf39479.179Labrus_bergylta
ENSMPUG00000013213CPSF39983.676ENSLACG00000008308CPSF39883.676Latimeria_chalumnae
ENSMPUG00000013213CPSF39989.150ENSLOCG00000016823cpsf39889.150Lepisosteus_oculatus
ENSMPUG00000013213CPSF39997.206ENSLAFG00000009467CPSF310097.206Loxodonta_africana
ENSMPUG00000013213CPSF310098.684ENSMFAG00000001339CPSF310098.684Macaca_fascicularis
ENSMPUG00000013213CPSF39598.609ENSMMUG00000018038CPSF310098.609Macaca_mulatta
ENSMPUG00000013213CPSF310085.965ENSMNEG00000039447CPSF310085.965Macaca_nemestrina
ENSMPUG00000013213CPSF310098.830ENSMLEG00000026825CPSF310098.830Mandrillus_leucophaeus
ENSMPUG00000013213CPSF39285.103ENSMAMG00000008835CPSF39985.103Mastacembelus_armatus
ENSMPUG00000013213CPSF39985.735ENSMAMG00000003076cpsf39885.735Mastacembelus_armatus
ENSMPUG00000013213CPSF39985.924ENSMZEG00005014358cpsf39985.924Maylandia_zebra
ENSMPUG00000013213CPSF39988.660ENSMZEG00005006258CPSF39888.660Maylandia_zebra
ENSMPUG00000013213CPSF39894.753ENSMGAG00000013995CPSF310094.753Meleagris_gallopavo
ENSMPUG00000013213CPSF35596.277ENSMAUG00000000166Cpsf310096.277Mesocricetus_auratus
ENSMPUG00000013213CPSF310093.567ENSMICG00000002363CPSF310093.567Microcebus_murinus
ENSMPUG00000013213CPSF310093.567ENSMOCG00000020067Cpsf310093.567Microtus_ochrogaster
ENSMPUG00000013213CPSF39482.508ENSMMOG00000018212CPSF39882.508Mola_mola
ENSMPUG00000013213CPSF37377.857ENSMMOG00000011923CPSF38477.857Mola_mola
ENSMPUG00000013213CPSF310095.658ENSMODG00000014703CPSF310095.658Monodelphis_domestica
ENSMPUG00000013213CPSF39986.050ENSMALG00000016416cpsf39986.050Monopterus_albus
ENSMPUG00000013213CPSF39383.412ENSMALG00000011474CPSF39983.412Monopterus_albus
ENSMPUG00000013213CPSF310098.099MGP_CAROLIEiJ_G0017640Cpsf310098.099Mus_caroli
ENSMPUG00000013213CPSF310098.099ENSMUSG00000054309Cpsf310098.099Mus_musculus
ENSMPUG00000013213CPSF310097.953MGP_PahariEiJ_G0029397Cpsf310097.953Mus_pahari
ENSMPUG00000013213CPSF310098.099MGP_SPRETEiJ_G0018481Cpsf310098.099Mus_spretus
ENSMPUG00000013213CPSF310097.956ENSMLUG00000010636CPSF310097.956Myotis_lucifugus
ENSMPUG00000013213CPSF310098.246ENSNGAG00000019836Cpsf310098.246Nannospalax_galili
ENSMPUG00000013213CPSF39985.484ENSNBRG00000004770cpsf39985.484Neolamprologus_brichardi
ENSMPUG00000013213CPSF39286.486ENSNBRG00000010525CPSF39986.486Neolamprologus_brichardi
ENSMPUG00000013213CPSF310098.684ENSNLEG00000013359CPSF310098.684Nomascus_leucogenys
ENSMPUG00000013213CPSF310064.912ENSMEUG00000013117-10064.912Notamacropus_eugenii
ENSMPUG00000013213CPSF310089.766ENSOPRG00000008902CPSF310089.766Ochotona_princeps
ENSMPUG00000013213CPSF310096.784ENSODEG00000003129CPSF310096.784Octodon_degus
ENSMPUG00000013213CPSF39986.070ENSONIG00000018812cpsf39986.070Oreochromis_niloticus
ENSMPUG00000013213CPSF38295.922ENSOANG00000008577CPSF310095.922Ornithorhynchus_anatinus
ENSMPUG00000013213CPSF310098.684ENSOCUG00000003728CPSF310098.684Oryctolagus_cuniculus
ENSMPUG00000013213CPSF39983.724ENSORLG00000018854cpsf39983.724Oryzias_latipes
ENSMPUG00000013213CPSF39983.578ENSORLG00020013331cpsf39983.578Oryzias_latipes_hni
ENSMPUG00000013213CPSF39983.724ENSORLG00015011017cpsf39983.724Oryzias_latipes_hsok
ENSMPUG00000013213CPSF39983.724ENSOMEG00000010647cpsf39483.724Oryzias_melastigma
ENSMPUG00000013213CPSF310088.743ENSOGAG00000001680CPSF310088.743Otolemur_garnettii
ENSMPUG00000013213CPSF310099.123ENSOARG00000015073CPSF310099.123Ovis_aries
ENSMPUG00000013213CPSF310098.830ENSPPAG00000042457CPSF310098.830Pan_paniscus
ENSMPUG00000013213CPSF310098.977ENSPPRG00000016790CPSF310098.977Panthera_pardus
ENSMPUG00000013213CPSF39998.971ENSPTIG00000003920CPSF310098.898Panthera_tigris_altaica
ENSMPUG00000013213CPSF310098.830ENSPTRG00000011638CPSF310098.830Pan_troglodytes
ENSMPUG00000013213CPSF310098.538ENSPANG00000016798CPSF310098.538Papio_anubis
ENSMPUG00000013213CPSF39989.868ENSPKIG00000023646cpsf39989.868Paramormyrops_kingsleyae
ENSMPUG00000013213CPSF39993.851ENSPSIG00000016144CPSF310093.851Pelodiscus_sinensis
ENSMPUG00000013213CPSF38385.340ENSPMGG00000006141-9985.340Periophthalmus_magnuspinnatus
ENSMPUG00000013213CPSF35979.208ENSPMGG00000015311CPSF39979.208Periophthalmus_magnuspinnatus
ENSMPUG00000013213CPSF310098.099ENSPEMG00000017668Cpsf310098.099Peromyscus_maniculatus_bairdii
ENSMPUG00000013213CPSF37890.317ENSPMAG00000004841cpsf39990.317Petromyzon_marinus
ENSMPUG00000013213CPSF39897.151ENSPCIG00000009823CPSF39897.546Phascolarctos_cinereus
ENSMPUG00000013213CPSF39988.235ENSPFOG00000010418-9888.235Poecilia_formosa
ENSMPUG00000013213CPSF39984.875ENSPFOG00000015922cpsf39984.875Poecilia_formosa
ENSMPUG00000013213CPSF35981.481ENSPLAG00000021300-9981.481Poecilia_latipinna
ENSMPUG00000013213CPSF39984.875ENSPLAG00000000882cpsf39984.875Poecilia_latipinna
ENSMPUG00000013213CPSF39985.022ENSPMEG00000018309cpsf39985.022Poecilia_mexicana
ENSMPUG00000013213CPSF39982.769ENSPREG00000004482CPSF39882.769Poecilia_reticulata
ENSMPUG00000013213CPSF39282.643ENSPREG00000014875cpsf39982.643Poecilia_reticulata
ENSMPUG00000013213CPSF310094.298ENSPPYG00000012666CPSF310094.298Pongo_abelii
ENSMPUG00000013213CPSF39563.902ENSPCAG00000015042CPSF310063.902Procavia_capensis
ENSMPUG00000013213CPSF38892.199ENSPCOG00000023016CPSF39892.199Propithecus_coquereli
ENSMPUG00000013213CPSF39998.975ENSPVAG00000005324CPSF39998.975Pteropus_vampyrus
ENSMPUG00000013213CPSF37991.529ENSPNYG00000021047CPSF39191.529Pundamilia_nyererei
ENSMPUG00000013213CPSF39985.924ENSPNYG00000004405cpsf39985.924Pundamilia_nyererei
ENSMPUG00000013213CPSF39987.187ENSPNAG00000023060cpsf39887.187Pygocentrus_nattereri
ENSMPUG00000013213CPSF39998.240ENSRNOG00000052418Cpsf39998.240Rattus_norvegicus
ENSMPUG00000013213CPSF310092.836ENSRBIG00000041615CPSF39994.127Rhinopithecus_bieti
ENSMPUG00000013213CPSF310098.830ENSRROG00000033792CPSF310098.830Rhinopithecus_roxellana
ENSMPUG00000013213CPSF38443.531YLR277CYSH18443.531Saccharomyces_cerevisiae
ENSMPUG00000013213CPSF310092.464ENSSBOG00000027263CPSF310092.464Saimiri_boliviensis_boliviensis
ENSMPUG00000013213CPSF310097.368ENSSHAG00000007024CPSF310097.368Sarcophilus_harrisii
ENSMPUG00000013213CPSF39989.883ENSSFOG00015002108cpsf39989.883Scleropages_formosus
ENSMPUG00000013213CPSF39587.963ENSSMAG00000020534CPSF39587.963Scophthalmus_maximus
ENSMPUG00000013213CPSF39985.924ENSSDUG00000002828cpsf39685.924Seriola_dumerili
ENSMPUG00000013213CPSF39988.365ENSSDUG00000018498CPSF39888.365Seriola_dumerili
ENSMPUG00000013213CPSF39985.777ENSSLDG00000008469cpsf39190.847Seriola_lalandi_dorsalis
ENSMPUG00000013213CPSF39988.365ENSSLDG00000005234CPSF39888.365Seriola_lalandi_dorsalis
ENSMPUG00000013213CPSF310080.994ENSSARG00000005186CPSF310080.994Sorex_araneus
ENSMPUG00000013213CPSF39892.250ENSSPUG00000015525CPSF39792.250Sphenodon_punctatus
ENSMPUG00000013213CPSF39988.071ENSSPAG00000002906CPSF39888.071Stegastes_partitus
ENSMPUG00000013213CPSF39985.735ENSSPAG00000018579cpsf39885.735Stegastes_partitus
ENSMPUG00000013213CPSF39999.413ENSSSCG00000020799CPSF39999.413Sus_scrofa
ENSMPUG00000013213CPSF39995.448ENSTGUG00000013016CPSF39995.448Taeniopygia_guttata
ENSMPUG00000013213CPSF35972.549ENSTRUG00000013905CPSF39972.549Takifugu_rubripes
ENSMPUG00000013213CPSF39985.169ENSTRUG00000007030cpsf39785.169Takifugu_rubripes
ENSMPUG00000013213CPSF38593.699ENSTBEG00000002707CPSF38593.699Tupaia_belangeri
ENSMPUG00000013213CPSF38896.774ENSTTRG00000000861CPSF38896.774Tursiops_truncatus
ENSMPUG00000013213CPSF39996.628ENSUAMG00000007535CPSF39896.628Ursus_americanus
ENSMPUG00000013213CPSF39599.227ENSUMAG00000003676CPSF310099.227Ursus_maritimus
ENSMPUG00000013213CPSF39395.899ENSVPAG00000008041CPSF310095.899Vicugna_pacos
ENSMPUG00000013213CPSF310099.269ENSVVUG00000002194CPSF310099.269Vulpes_vulpes
ENSMPUG00000013213CPSF39989.883ENSXETG00000008263cpsf39989.883Xenopus_tropicalis
ENSMPUG00000013213CPSF35480.108ENSXCOG00000000957-8780.108Xiphophorus_couchianus
ENSMPUG00000013213CPSF39985.169ENSXCOG00000019695cpsf39985.169Xiphophorus_couchianus
ENSMPUG00000013213CPSF39984.875ENSXMAG00000009784cpsf39984.875Xiphophorus_maculatus
ENSMPUG00000013213CPSF39988.382ENSXMAG00000027291CPSF39888.382Xiphophorus_maculatus

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