EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMPUG00000013239 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mustela_putorius_furo
Status: putative
Strand: Plus strand
Length: 12993 bases
Position: chrGL896907.1:13175857-13188849
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMPUP00000013141	APOBEC_N	PF08210.11	2.2e-86	1	2
ENSMPUP00000013141	APOBEC_N	PF08210.11	2.2e-86	2	2
ENSMPUP00000013141	APOBEC_C	PF05240.14	9.4e-63	1	2
ENSMPUP00000013141	APOBEC_C	PF05240.14	9.4e-63	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMPUT00000013352	-	2674	-	ENSMPUP00000013141	383 (aa)	-	M3YP84

Gene Model

Click here to download ENSMPUG00000013239's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMPUG00000013239's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMPUG00000013239	-	60	37.383	ENSMPUG00000017532	APOBEC1	57	37.383
ENSMPUG00000013239	-	95	43.103	ENSMPUG00000017533	AICDA	98	43.103
ENSMPUG00000013239	-	87	39.375	ENSMPUG00000013235	-	98	39.375
ENSMPUG00000013239	-	82	34.054	ENSMPUG00000013691	APOBEC2	77	34.054

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMPUG00000013239	-	78	48.333	ENSG00000100298	APOBEC3H	99	48.333	Homo_sapiens
ENSMPUG00000013239	-	100	60.592	ENSAMEG00000010818	-	99	60.592	Ailuropoda_melanoleuca
ENSMPUG00000013239	-	84	49.268	ENSANAG00000025410	APOBEC3H	91	49.754	Aotus_nancymaae
ENSMPUG00000013239	-	97	52.011	ENSBTAG00000007755	APOBEC3H	97	52.011	Bos_taurus
ENSMPUG00000013239	-	85	50.000	ENSCJAG00000012524	APOBEC3H	91	49.275	Callithrix_jacchus
ENSMPUG00000013239	-	91	66.839	ENSCAFG00000001361	APOBEC3Z3	100	66.839	Canis_familiaris
ENSMPUG00000013239	-	86	67.614	ENSCAFG00020002584	-	96	67.614	Canis_lupus_dingo
ENSMPUG00000013239	-	97	52.893	ENSCHIG00000026580	-	97	52.893	Capra_hircus
ENSMPUG00000013239	-	83	56.471	ENSTSYG00000032894	-	99	56.471	Carlito_syrichta
ENSMPUG00000013239	-	99	45.619	ENSCPOG00000009257	-	92	45.619	Cavia_porcellus
ENSMPUG00000013239	-	83	49.000	ENSCCAG00000008525	APOBEC3H	94	49.000	Cebus_capucinus
ENSMPUG00000013239	-	71	52.514	ENSCATG00000030302	APOBEC3H	99	52.514	Cercocebus_atys
ENSMPUG00000013239	-	91	51.813	ENSCLAG00000016615	-	96	51.813	Chinchilla_lanigera
ENSMPUG00000013239	-	89	49.495	ENSCSAG00000006371	APOBEC3H	94	49.495	Chlorocebus_sabaeus
ENSMPUG00000013239	-	98	49.326	ENSCGRG00001022976	Apobec3	88	49.326	Cricetulus_griseus_chok1gshd
ENSMPUG00000013239	-	98	49.326	ENSCGRG00000005621	Apobec3	88	49.326	Cricetulus_griseus_crigri
ENSMPUG00000013239	-	95	47.059	ENSDORG00000027271	-	100	47.674	Dipodomys_ordii
ENSMPUG00000013239	-	86	53.030	ENSECAG00000007726	APOBEC3H	86	53.030	Equus_caballus
ENSMPUG00000013239	-	92	65.803	ENSFCAG00000005251	APOBEC3Z3	99	65.803	Felis_catus
ENSMPUG00000013239	-	87	57.865	ENSSTOG00000007125	-	87	57.865	Ictidomys_tridecemlineatus
ENSMPUG00000013239	-	90	47.531	ENSJJAG00000016840	-	85	47.531	Jaculus_jaculus
ENSMPUG00000013239	-	96	42.541	ENSLAFG00000027404	-	97	42.541	Loxodonta_africana
ENSMPUG00000013239	-	75	49.746	ENSMFAG00000031827	APOBEC3H	94	49.746	Macaca_fascicularis
ENSMPUG00000013239	-	75	49.746	ENSMMUG00000001016	APOBEC3H	94	49.746	Macaca_mulatta
ENSMPUG00000013239	-	75	49.746	ENSMNEG00000039259	APOBEC3H	94	49.746	Macaca_nemestrina
ENSMPUG00000013239	-	75	50.000	ENSMLEG00000033417	APOBEC3H	97	48.322	Mandrillus_leucophaeus
ENSMPUG00000013239	-	94	48.656	ENSMAUG00000011683	Apobec3	91	48.656	Mesocricetus_auratus
ENSMPUG00000013239	-	98	44.140	ENSMOCG00000021576	Apobec3	94	45.220	Microtus_ochrogaster
ENSMPUG00000013239	-	96	43.307	MGP_CAROLIEiJ_G0020029	Apobec3	98	43.098	Mus_caroli
ENSMPUG00000013239	-	96	44.357	ENSMUSG00000009585	Apobec3	100	48.000	Mus_musculus
ENSMPUG00000013239	-	96	45.052	MGP_PahariEiJ_G0020031	-	95	41.587	Mus_pahari
ENSMPUG00000013239	-	96	43.307	MGP_SPRETEiJ_G0020927	Apobec3	100	42.169	Mus_spretus
ENSMPUG00000013239	-	97	44.909	ENSNGAG00000018998	Apobec3	98	47.797	Nannospalax_galili
ENSMPUG00000013239	-	87	48.744	ENSNLEG00000015218	-	94	48.744	Nomascus_leucogenys
ENSMPUG00000013239	-	98	42.049	ENSOCUG00000023913	-	92	42.049	Oryctolagus_cuniculus
ENSMPUG00000013239	-	97	53.279	ENSOARG00000016290	APOBEC3F	98	53.279	Ovis_aries
ENSMPUG00000013239	-	78	50.000	ENSPPAG00000036522	APOBEC3H	98	50.000	Pan_paniscus
ENSMPUG00000013239	-	92	65.979	ENSPPRG00000003941	-	99	65.979	Panthera_pardus
ENSMPUG00000013239	-	96	65.263	ENSPPRG00000003675	-	99	65.263	Panthera_pardus
ENSMPUG00000013239	-	92	65.979	ENSPTIG00000010283	-	99	65.979	Panthera_tigris_altaica
ENSMPUG00000013239	-	78	50.000	ENSPTRG00000014390	APOBEC3H	98	50.000	Pan_troglodytes
ENSMPUG00000013239	-	75	49.239	ENSPANG00000010774	APOBEC3H	94	49.444	Papio_anubis
ENSMPUG00000013239	-	95	43.457	ENSPEMG00000000456	Apobec3	92	43.704	Peromyscus_maniculatus_bairdii
ENSMPUG00000013239	-	83	46.970	ENSPPYG00000011834	-	94	48.744	Pongo_abelii
ENSMPUG00000013239	-	81	45.833	ENSPCAG00000015655	-	95	45.833	Procavia_capensis
ENSMPUG00000013239	-	66	53.226	ENSPVAG00000024267	-	98	53.226	Pteropus_vampyrus
ENSMPUG00000013239	-	87	54.857	ENSPVAG00000009462	-	99	54.857	Pteropus_vampyrus
ENSMPUG00000013239	-	66	53.968	ENSPVAG00000024161	-	98	53.968	Pteropus_vampyrus
ENSMPUG00000013239	-	94	44.920	ENSRNOG00000016852	Apobec3	92	44.920	Rattus_norvegicus
ENSMPUG00000013239	-	75	48.485	ENSRBIG00000029088	APOBEC3H	94	48.485	Rhinopithecus_bieti
ENSMPUG00000013239	-	76	49.000	ENSRROG00000024699	APOBEC3H	97	47.651	Rhinopithecus_roxellana
ENSMPUG00000013239	-	80	50.549	ENSSBOG00000030005	APOBEC3H	99	50.549	Saimiri_boliviensis_boliviensis
ENSMPUG00000013239	-	99	53.627	ENSSSCG00000000091	APOBEC3B	91	53.627	Sus_scrofa
ENSMPUG00000013239	-	80	57.229	ENSTBEG00000001532	-	99	57.229	Tupaia_belangeri
ENSMPUG00000013239	-	89	59.887	ENSTTRG00000001266	-	100	59.887	Tursiops_truncatus
ENSMPUG00000013239	-	90	64.103	ENSUAMG00000004427	-	91	64.103	Ursus_americanus
ENSMPUG00000013239	-	92	68.912	ENSUMAG00000014435	-	99	68.912	Ursus_maritimus
ENSMPUG00000013239	-	65	56.693	ENSVPAG00000011108	-	99	56.693	Vicugna_pacos
ENSMPUG00000013239	-	86	70.732	ENSVVUG00000014624	-	67	70.732	Vulpes_vulpes