EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMPUG00000013348 (Gene tree)
Gene ID: 101678438
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Mustela_putorius_furo
Status: putative
Strand: Minus strand
Length: 133100 bases
Position: chrGL896922.1:3629851-3762950
Accession: 29318
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMPUP00000013249	Ago_hook	PF10427.9	2e-21	1	1
ENSMPUP00000013249	RRM_1	PF00076.22	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMPUT00000013461	TNRC6C-201	5865	-	ENSMPUP00000013249	1954 (aa)	-	M3YPJ1

Gene Model

Click here to download ENSMPUG00000013348's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMPUG00000013348's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMPUG00000013348	TNRC6C	97	39.818	ENSMPUG00000012324	TNRC6A	99	39.446
ENSMPUG00000013348	TNRC6C	94	45.930	ENSMPUG00000016442	TNRC6B	94	46.183

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMPUG00000013348	TNRC6C	98	88.768	ENSG00000078687	TNRC6C	100	89.062	Homo_sapiens
ENSMPUG00000013348	TNRC6C	71	53.749	ENSAPOG00000019749	tnrc6c1	98	48.863	Acanthochromis_polyacanthus
ENSMPUG00000013348	TNRC6C	92	92.537	ENSAMEG00000013756	TNRC6C	99	92.231	Ailuropoda_melanoleuca
ENSMPUG00000013348	TNRC6C	87	52.309	ENSACIG00000008075	tnrc6c1	79	52.994	Amphilophus_citrinellus
ENSMPUG00000013348	TNRC6C	69	64.458	ENSAOCG00000023968	tnrc6c1	99	48.760	Amphiprion_ocellaris
ENSMPUG00000013348	TNRC6C	71	53.642	ENSAPEG00000009020	tnrc6c1	99	48.812	Amphiprion_percula
ENSMPUG00000013348	TNRC6C	97	83.940	ENSAPLG00000005456	TNRC6C	100	83.992	Anas_platyrhynchos
ENSMPUG00000013348	TNRC6C	98	83.610	ENSACAG00000016198	TNRC6C	99	83.523	Anolis_carolinensis
ENSMPUG00000013348	TNRC6C	98	88.450	ENSANAG00000021554	TNRC6C	99	88.410	Aotus_nancymaae
ENSMPUG00000013348	TNRC6C	90	52.378	ENSACLG00000000424	tnrc6c1	99	52.374	Astatotilapia_calliptera
ENSMPUG00000013348	TNRC6C	95	91.734	ENSBTAG00000018658	TNRC6C	99	92.640	Bos_taurus
ENSMPUG00000013348	TNRC6C	98	88.345	ENSCJAG00000019431	TNRC6C	99	88.263	Callithrix_jacchus
ENSMPUG00000013348	TNRC6C	98	94.188	ENSCAFG00000005224	TNRC6C	99	94.299	Canis_familiaris
ENSMPUG00000013348	TNRC6C	97	93.623	ENSCAFG00020006661	TNRC6C	99	93.727	Canis_lupus_dingo
ENSMPUG00000013348	TNRC6C	97	87.513	ENSCHIG00000026004	TNRC6C	98	87.618	Capra_hircus
ENSMPUG00000013348	TNRC6C	88	89.455	ENSTSYG00000005403	TNRC6C	100	89.340	Carlito_syrichta
ENSMPUG00000013348	TNRC6C	97	79.456	ENSCAPG00000007307	TNRC6C	99	79.151	Cavia_aperea
ENSMPUG00000013348	TNRC6C	98	84.527	ENSCPOG00000000467	TNRC6C	99	84.274	Cavia_porcellus
ENSMPUG00000013348	TNRC6C	98	88.762	ENSCCAG00000030524	TNRC6C	100	89.172	Cebus_capucinus
ENSMPUG00000013348	TNRC6C	98	88.606	ENSCATG00000033135	TNRC6C	100	89.056	Cercocebus_atys
ENSMPUG00000013348	TNRC6C	98	86.266	ENSCLAG00000011139	TNRC6C	99	86.319	Chinchilla_lanigera
ENSMPUG00000013348	TNRC6C	98	88.871	ENSCSAG00000005167	TNRC6C	99	88.831	Chlorocebus_sabaeus
ENSMPUG00000013348	TNRC6C	69	86.555	ENSCHOG00000000088	TNRC6C	75	86.555	Choloepus_hoffmanni
ENSMPUG00000013348	TNRC6C	91	83.799	ENSCPBG00000027960	TNRC6C	100	83.942	Chrysemys_picta_bellii
ENSMPUG00000013348	TNRC6C	98	88.293	ENSCANG00000041771	TNRC6C	100	88.651	Colobus_angolensis_palliatus
ENSMPUG00000013348	TNRC6C	98	84.079	ENSCGRG00001022686	Tnrc6c	100	83.112	Cricetulus_griseus_chok1gshd
ENSMPUG00000013348	TNRC6C	98	84.403	ENSCGRG00000018041	Tnrc6c	100	83.112	Cricetulus_griseus_crigri
ENSMPUG00000013348	TNRC6C	71	51.357	ENSCSEG00000012744	tnrc6c1	98	46.680	Cynoglossus_semilaevis
ENSMPUG00000013348	TNRC6C	97	50.321	ENSDARG00000076847	tnrc6c1	96	54.638	Danio_rerio
ENSMPUG00000013348	TNRC6C	99	85.729	ENSDNOG00000003247	TNRC6C	99	85.752	Dasypus_novemcinctus
ENSMPUG00000013348	TNRC6C	97	81.923	ENSDORG00000004558	Tnrc6c	100	82.285	Dipodomys_ordii
ENSMPUG00000013348	TNRC6C	82	78.349	ENSETEG00000005527	TNRC6C	90	78.349	Echinops_telfairi
ENSMPUG00000013348	TNRC6C	88	87.935	ENSEASG00005004799	TNRC6C	100	87.935	Equus_asinus_asinus
ENSMPUG00000013348	TNRC6C	97	89.717	ENSECAG00000012486	TNRC6C	99	89.717	Equus_caballus
ENSMPUG00000013348	TNRC6C	87	87.627	ENSEEUG00000010008	TNRC6C	96	87.627	Erinaceus_europaeus
ENSMPUG00000013348	TNRC6C	98	90.417	ENSFCAG00000028358	TNRC6C	99	90.531	Felis_catus
ENSMPUG00000013348	TNRC6C	88	83.580	ENSFALG00000000848	TNRC6C	100	83.466	Ficedula_albicollis
ENSMPUG00000013348	TNRC6C	91	85.577	ENSFDAG00000010368	TNRC6C	99	85.175	Fukomys_damarensis
ENSMPUG00000013348	TNRC6C	58	43.302	ENSFHEG00000002936	tnrc6c1	99	47.819	Fundulus_heteroclitus
ENSMPUG00000013348	TNRC6C	92	85.436	ENSGALG00000001725	TNRC6C	99	85.436	Gallus_gallus
ENSMPUG00000013348	TNRC6C	98	47.499	ENSGAFG00000019019	tnrc6c1	100	47.767	Gambusia_affinis
ENSMPUG00000013348	TNRC6C	92	51.955	ENSGACG00000012320	tnrc6c1	97	46.921	Gasterosteus_aculeatus
ENSMPUG00000013348	TNRC6C	91	85.315	ENSGAGG00000022043	TNRC6C	99	85.128	Gopherus_agassizii
ENSMPUG00000013348	TNRC6C	98	88.352	ENSGGOG00000011304	TNRC6C	100	88.542	Gorilla_gorilla
ENSMPUG00000013348	TNRC6C	94	49.767	ENSHBUG00000010846	tnrc6c1	99	52.736	Haplochromis_burtoni
ENSMPUG00000013348	TNRC6C	98	86.259	ENSHGLG00000004809	TNRC6C	99	86.169	Heterocephalus_glaber_female
ENSMPUG00000013348	TNRC6C	98	85.432	ENSHGLG00100012597	TNRC6C	99	85.135	Heterocephalus_glaber_male
ENSMPUG00000013348	TNRC6C	98	51.160	ENSIPUG00000000818	tnrc6c1	98	51.511	Ictalurus_punctatus
ENSMPUG00000013348	TNRC6C	98	85.172	ENSSTOG00000009101	TNRC6C	99	85.867	Ictidomys_tridecemlineatus
ENSMPUG00000013348	TNRC6C	98	84.200	ENSJJAG00000017055	Tnrc6c	99	84.320	Jaculus_jaculus
ENSMPUG00000013348	TNRC6C	96	48.002	ENSKMAG00000021023	tnrc6c1	98	48.592	Kryptolebias_marmoratus
ENSMPUG00000013348	TNRC6C	91	72.260	ENSLACG00000015283	TNRC6C	99	72.539	Latimeria_chalumnae
ENSMPUG00000013348	TNRC6C	97	70.926	ENSLOCG00000013377	tnrc6c1	99	55.107	Lepisosteus_oculatus
ENSMPUG00000013348	TNRC6C	98	86.354	ENSLAFG00000011122	TNRC6C	99	85.618	Loxodonta_africana
ENSMPUG00000013348	TNRC6C	97	88.530	ENSMFAG00000043943	TNRC6C	100	88.998	Macaca_fascicularis
ENSMPUG00000013348	TNRC6C	98	88.987	ENSMMUG00000011924	TNRC6C	100	86.936	Macaca_mulatta
ENSMPUG00000013348	TNRC6C	98	88.658	ENSMNEG00000030405	TNRC6C	99	88.617	Macaca_nemestrina
ENSMPUG00000013348	TNRC6C	98	88.658	ENSMLEG00000033436	TNRC6C	100	89.056	Mandrillus_leucophaeus
ENSMPUG00000013348	TNRC6C	71	53.659	ENSMAMG00000023613	tnrc6c1	100	49.916	Mastacembelus_armatus
ENSMPUG00000013348	TNRC6C	94	50.896	ENSMZEG00005010920	tnrc6c1	99	52.374	Maylandia_zebra
ENSMPUG00000013348	TNRC6C	97	78.211	ENSMGAG00000003906	TNRC6C	100	77.535	Meleagris_gallopavo
ENSMPUG00000013348	TNRC6C	88	84.841	ENSMAUG00000021618	Tnrc6c	100	84.323	Mesocricetus_auratus
ENSMPUG00000013348	TNRC6C	98	89.016	ENSMICG00000003952	TNRC6C	100	89.455	Microcebus_murinus
ENSMPUG00000013348	TNRC6C	98	85.432	ENSMOCG00000015879	Tnrc6c	99	85.079	Microtus_ochrogaster
ENSMPUG00000013348	TNRC6C	69	53.338	ENSMMOG00000005203	tnrc6c1	100	49.007	Mola_mola
ENSMPUG00000013348	TNRC6C	98	81.383	ENSMODG00000001785	TNRC6C	99	81.247	Monodelphis_domestica
ENSMPUG00000013348	TNRC6C	98	85.432	MGP_CAROLIEiJ_G0017465	Tnrc6c	99	85.980	Mus_caroli
ENSMPUG00000013348	TNRC6C	98	84.860	ENSMUSG00000025571	Tnrc6c	99	84.685	Mus_musculus
ENSMPUG00000013348	TNRC6C	98	85.380	MGP_PahariEiJ_G0018593	Tnrc6c	99	85.923	Mus_pahari
ENSMPUG00000013348	TNRC6C	99	85.107	MGP_SPRETEiJ_G0018309	Tnrc6c	99	84.741	Mus_spretus
ENSMPUG00000013348	TNRC6C	99	82.783	ENSMLUG00000014431	TNRC6C	98	82.420	Myotis_lucifugus
ENSMPUG00000013348	TNRC6C	98	85.112	ENSNGAG00000012203	Tnrc6c	99	84.659	Nannospalax_galili
ENSMPUG00000013348	TNRC6C	90	53.292	ENSNBRG00000005344	tnrc6c1	99	53.288	Neolamprologus_brichardi
ENSMPUG00000013348	TNRC6C	97	86.475	ENSNLEG00000000047	TNRC6C	99	86.266	Nomascus_leucogenys
ENSMPUG00000013348	TNRC6C	88	75.719	ENSMEUG00000005104	TNRC6C	99	89.062	Notamacropus_eugenii
ENSMPUG00000013348	TNRC6C	88	86.385	ENSODEG00000012499	TNRC6C	100	85.623	Octodon_degus
ENSMPUG00000013348	TNRC6C	83	49.672	ENSONIG00000002210	tnrc6c1	96	51.493	Oreochromis_niloticus
ENSMPUG00000013348	TNRC6C	97	60.992	ENSOANG00000009758	-	100	60.462	Ornithorhynchus_anatinus
ENSMPUG00000013348	TNRC6C	83	79.939	ENSOCUG00000006122	TNRC6C	95	75.524	Oryctolagus_cuniculus
ENSMPUG00000013348	TNRC6C	92	46.567	ENSORLG00000009837	tnrc6c1	100	68.401	Oryzias_latipes
ENSMPUG00000013348	TNRC6C	92	47.113	ENSORLG00020016510	tnrc6c1	99	47.770	Oryzias_latipes_hni
ENSMPUG00000013348	TNRC6C	73	41.990	ENSORLG00015000171	tnrc6c1	97	42.736	Oryzias_latipes_hsok
ENSMPUG00000013348	TNRC6C	92	46.995	ENSOMEG00000000357	tnrc6c1	99	47.252	Oryzias_melastigma
ENSMPUG00000013348	TNRC6C	88	88.181	ENSOGAG00000007197	TNRC6C	100	87.826	Otolemur_garnettii
ENSMPUG00000013348	TNRC6C	94	84.758	ENSOARG00000006041	TNRC6C	98	84.883	Ovis_aries
ENSMPUG00000013348	TNRC6C	97	88.628	ENSPPAG00000027160	TNRC6C	100	88.998	Pan_paniscus
ENSMPUG00000013348	TNRC6C	98	90.625	ENSPPRG00000018881	TNRC6C	99	90.739	Panthera_pardus
ENSMPUG00000013348	TNRC6C	89	77.482	ENSPTIG00000008791	TNRC6C	91	72.803	Panthera_tigris_altaica
ENSMPUG00000013348	TNRC6C	98	88.710	ENSPTRG00000009699	TNRC6C	100	88.998	Pan_troglodytes
ENSMPUG00000013348	TNRC6C	98	88.606	ENSPANG00000019994	TNRC6C	99	88.565	Papio_anubis
ENSMPUG00000013348	TNRC6C	85	53.012	ENSPKIG00000005428	tnrc6c1	98	51.691	Paramormyrops_kingsleyae
ENSMPUG00000013348	TNRC6C	91	81.972	ENSPSIG00000018069	TNRC6C	99	81.465	Pelodiscus_sinensis
ENSMPUG00000013348	TNRC6C	58	57.928	ENSPMGG00000022911	tnrc6c1	98	62.602	Periophthalmus_magnuspinnatus
ENSMPUG00000013348	TNRC6C	98	85.224	ENSPEMG00000009785	Tnrc6c	99	84.659	Peromyscus_maniculatus_bairdii
ENSMPUG00000013348	TNRC6C	50	80.698	ENSPCIG00000017421	-	99	81.006	Phascolarctos_cinereus
ENSMPUG00000013348	TNRC6C	96	47.862	ENSPFOG00000012560	tnrc6c1	97	55.415	Poecilia_formosa
ENSMPUG00000013348	TNRC6C	85	51.195	ENSPLAG00000021055	tnrc6c1	100	49.633	Poecilia_latipinna
ENSMPUG00000013348	TNRC6C	98	89.353	ENSPPYG00000008679	TNRC6C	98	88.727	Pongo_abelii
ENSMPUG00000013348	TNRC6C	85	85.900	ENSPCAG00000012510	TNRC6C	90	87.983	Procavia_capensis
ENSMPUG00000013348	TNRC6C	88	89.925	ENSPCOG00000021451	TNRC6C	100	89.809	Propithecus_coquereli
ENSMPUG00000013348	TNRC6C	87	95.763	ENSPVAG00000002008	TNRC6C	95	95.763	Pteropus_vampyrus
ENSMPUG00000013348	TNRC6C	90	52.008	ENSPNYG00000014477	tnrc6c1	99	51.937	Pundamilia_nyererei
ENSMPUG00000013348	TNRC6C	88	85.599	ENSRNOG00000022395	Tnrc6c	100	85.599	Rattus_norvegicus
ENSMPUG00000013348	TNRC6C	97	88.472	ENSRBIG00000027777	TNRC6C	100	88.882	Rhinopithecus_bieti
ENSMPUG00000013348	TNRC6C	98	88.554	ENSRROG00000042912	TNRC6C	100	88.940	Rhinopithecus_roxellana
ENSMPUG00000013348	TNRC6C	98	88.241	ENSSBOG00000023981	TNRC6C	100	88.651	Saimiri_boliviensis_boliviensis
ENSMPUG00000013348	TNRC6C	61	56.734	ENSSFOG00015004735	-	99	59.000	Scleropages_formosus
ENSMPUG00000013348	TNRC6C	89	57.153	ENSSFOG00015006475	tnrc6c1	99	50.958	Scleropages_formosus
ENSMPUG00000013348	TNRC6C	92	46.324	ENSSMAG00000012761	tnrc6c1	99	48.893	Scophthalmus_maximus
ENSMPUG00000013348	TNRC6C	92	48.461	ENSSDUG00000002366	tnrc6c1	99	49.126	Seriola_dumerili
ENSMPUG00000013348	TNRC6C	83	48.610	ENSSLDG00000025613	tnrc6c1	100	48.313	Seriola_lalandi_dorsalis
ENSMPUG00000013348	TNRC6C	83	95.798	ENSSARG00000006816	TNRC6C	91	95.798	Sorex_araneus
ENSMPUG00000013348	TNRC6C	79	84.203	ENSSPUG00000007341	TNRC6C	91	84.203	Sphenodon_punctatus
ENSMPUG00000013348	TNRC6C	69	53.421	ENSSPAG00000014977	tnrc6c1	98	47.234	Stegastes_partitus
ENSMPUG00000013348	TNRC6C	85	92.451	ENSSSCG00000034373	TNRC6C	100	92.033	Sus_scrofa
ENSMPUG00000013348	TNRC6C	91	83.446	ENSTGUG00000007733	TNRC6C	99	83.671	Taeniopygia_guttata
ENSMPUG00000013348	TNRC6C	71	53.894	ENSTRUG00000011685	tnrc6c1	97	49.857	Takifugu_rubripes
ENSMPUG00000013348	TNRC6C	87	52.031	ENSTNIG00000005273	tnrc6c1	100	60.392	Tetraodon_nigroviridis
ENSMPUG00000013348	TNRC6C	57	83.394	ENSTBEG00000005046	TNRC6C	92	83.291	Tupaia_belangeri
ENSMPUG00000013348	TNRC6C	91	87.788	ENSTTRG00000010828	TNRC6C	99	87.901	Tursiops_truncatus
ENSMPUG00000013348	TNRC6C	98	91.532	ENSUMAG00000013614	TNRC6C	99	91.819	Ursus_maritimus
ENSMPUG00000013348	TNRC6C	88	92.281	ENSVVUG00000015268	TNRC6C	100	92.281	Vulpes_vulpes
ENSMPUG00000013348	TNRC6C	88	71.855	ENSXETG00000019470	tnrc6c	100	71.568	Xenopus_tropicalis
ENSMPUG00000013348	TNRC6C	98	47.251	ENSXMAG00000025971	tnrc6c1	100	47.769	Xiphophorus_maculatus