EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMPUG00000016971 (Gene tree)
Gene ID: 101688022
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Mustela_putorius_furo
Status: putative
Strand: Plus strand
Length: 76878 bases
Position: chrGL897000.1:6379003-6455880
Accession: 24086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMPUP00000016867	DND1_DSRM	PF14709.7	3.8e-24	1	1
ENSMPUP00000016867	RRM_1	PF00076.22	1.1e-24	1	2
ENSMPUP00000016867	RRM_1	PF00076.22	1.1e-24	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMPUT00000017116	A1CF-201	1943	-	ENSMPUP00000016867	592 (aa)	-	M3YZV6

Gene Model

Click here to download ENSMPUG00000016971's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMPUG00000016971's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMPUG00000016971	A1CF	69	62.739	ENSMPUG00000005670	RBM46	85	62.739
ENSMPUG00000016971	A1CF	74	53.982	ENSMPUG00000006177	RBM47	68	53.846
ENSMPUG00000016971	A1CF	52	46.602	ENSMPUG00000005313	SYNCRIP	57	45.846
ENSMPUG00000016971	A1CF	53	46.519	ENSMPUG00000015898	-	50	46.519

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMPUG00000016971	A1CF	100	90.236	ENSG00000148584	A1CF	100	90.236	Homo_sapiens
ENSMPUG00000016971	A1CF	100	68.220	ENSAPOG00000008259	a1cf	100	68.386	Acanthochromis_polyacanthus
ENSMPUG00000016971	A1CF	100	91.216	ENSAMEG00000000523	A1CF	100	91.216	Ailuropoda_melanoleuca
ENSMPUG00000016971	A1CF	100	69.984	ENSACIG00000008632	a1cf	100	70.962	Amphilophus_citrinellus
ENSMPUG00000016971	A1CF	100	68.801	ENSAOCG00000023744	a1cf	96	75.072	Amphiprion_ocellaris
ENSMPUG00000016971	A1CF	100	69.787	ENSAPEG00000009537	a1cf	100	70.772	Amphiprion_percula
ENSMPUG00000016971	A1CF	100	70.684	ENSATEG00000013720	a1cf	100	71.173	Anabas_testudineus
ENSMPUG00000016971	A1CF	100	82.631	ENSAPLG00000002964	A1CF	100	82.125	Anas_platyrhynchos
ENSMPUG00000016971	A1CF	100	77.572	ENSACAG00000015269	A1CF	100	76.728	Anolis_carolinensis
ENSMPUG00000016971	A1CF	100	89.057	ENSANAG00000019974	A1CF	100	88.889	Aotus_nancymaae
ENSMPUG00000016971	A1CF	100	67.323	ENSACLG00000017428	a1cf	100	68.966	Astatotilapia_calliptera
ENSMPUG00000016971	A1CF	100	69.091	ENSAMXG00000018180	a1cf	100	68.760	Astyanax_mexicanus
ENSMPUG00000016971	A1CF	100	87.731	ENSBTAG00000021195	A1CF	100	87.731	Bos_taurus
ENSMPUG00000016971	A1CF	100	90.404	ENSCJAG00000005045	A1CF	100	90.404	Callithrix_jacchus
ENSMPUG00000016971	A1CF	100	90.541	ENSCAFG00000015581	A1CF	100	89.865	Canis_familiaris
ENSMPUG00000016971	A1CF	100	90.541	ENSCAFG00020026421	A1CF	100	89.865	Canis_lupus_dingo
ENSMPUG00000016971	A1CF	100	88.571	ENSCHIG00000020411	A1CF	100	88.571	Capra_hircus
ENSMPUG00000016971	A1CF	95	88.948	ENSTSYG00000001755	A1CF	100	87.835	Carlito_syrichta
ENSMPUG00000016971	A1CF	100	72.699	ENSCAPG00000017386	A1CF	100	72.699	Cavia_aperea
ENSMPUG00000016971	A1CF	100	89.057	ENSCPOG00000009807	A1CF	100	89.057	Cavia_porcellus
ENSMPUG00000016971	A1CF	100	90.219	ENSCCAG00000018168	A1CF	100	90.051	Cebus_capucinus
ENSMPUG00000016971	A1CF	100	88.851	ENSCATG00000043715	A1CF	100	88.851	Cercocebus_atys
ENSMPUG00000016971	A1CF	100	89.262	ENSCLAG00000010424	A1CF	100	89.094	Chinchilla_lanigera
ENSMPUG00000016971	A1CF	100	90.372	ENSCSAG00000007032	A1CF	100	90.372	Chlorocebus_sabaeus
ENSMPUG00000016971	A1CF	97	83.673	ENSCHOG00000009089	A1CF	98	83.673	Choloepus_hoffmanni
ENSMPUG00000016971	A1CF	100	82.631	ENSCPBG00000026464	A1CF	100	81.956	Chrysemys_picta_bellii
ENSMPUG00000016971	A1CF	100	90.541	ENSCANG00000038032	A1CF	100	90.541	Colobus_angolensis_palliatus
ENSMPUG00000016971	A1CF	100	87.059	ENSCGRG00001017413	A1cf	100	87.059	Cricetulus_griseus_chok1gshd
ENSMPUG00000016971	A1CF	100	86.387	ENSCGRG00000017332	A1cf	100	87.395	Cricetulus_griseus_crigri
ENSMPUG00000016971	A1CF	100	69.486	ENSCSEG00000002361	a1cf	100	70.647	Cynoglossus_semilaevis
ENSMPUG00000016971	A1CF	100	69.055	ENSCVAG00000010520	a1cf	100	70.358	Cyprinodon_variegatus
ENSMPUG00000016971	A1CF	100	72.742	ENSDARG00000002968	a1cf	100	74.080	Danio_rerio
ENSMPUG00000016971	A1CF	100	87.899	ENSDNOG00000002829	A1CF	100	88.235	Dasypus_novemcinctus
ENSMPUG00000016971	A1CF	81	87.317	ENSETEG00000012527	A1CF	81	87.317	Echinops_telfairi
ENSMPUG00000016971	A1CF	100	90.117	ENSEASG00005012924	A1CF	100	90.117	Equus_asinus_asinus
ENSMPUG00000016971	A1CF	100	89.112	ENSECAG00000010424	A1CF	100	89.112	Equus_caballus
ENSMPUG00000016971	A1CF	76	74.444	ENSEEUG00000000013	A1CF	96	72.294	Erinaceus_europaeus
ENSMPUG00000016971	A1CF	100	73.579	ENSELUG00000003159	a1cf	100	74.080	Esox_lucius
ENSMPUG00000016971	A1CF	100	88.176	ENSFCAG00000011179	A1CF	100	88.176	Felis_catus
ENSMPUG00000016971	A1CF	100	80.438	ENSFALG00000013183	A1CF	100	79.933	Ficedula_albicollis
ENSMPUG00000016971	A1CF	100	86.891	ENSFDAG00000019371	A1CF	100	86.723	Fukomys_damarensis
ENSMPUG00000016971	A1CF	100	64.495	ENSFHEG00000019652	a1cf	100	65.798	Fundulus_heteroclitus
ENSMPUG00000016971	A1CF	100	66.777	ENSGMOG00000018943	a1cf	100	66.446	Gadus_morhua
ENSMPUG00000016971	A1CF	95	82.028	ENSGALG00000003765	A1CF	97	81.317	Gallus_gallus
ENSMPUG00000016971	A1CF	100	64.803	ENSGAFG00000014868	a1cf	100	65.625	Gambusia_affinis
ENSMPUG00000016971	A1CF	100	69.243	ENSGACG00000010241	a1cf	100	69.572	Gasterosteus_aculeatus
ENSMPUG00000016971	A1CF	94	82.143	ENSGAGG00000016508	A1CF	97	81.429	Gopherus_agassizii
ENSMPUG00000016971	A1CF	100	90.067	ENSGGOG00000009670	A1CF	100	89.899	Gorilla_gorilla
ENSMPUG00000016971	A1CF	100	68.679	ENSHBUG00000021959	a1cf	100	70.310	Haplochromis_burtoni
ENSMPUG00000016971	A1CF	100	89.076	ENSHGLG00000008955	A1CF	100	88.908	Heterocephalus_glaber_female
ENSMPUG00000016971	A1CF	100	88.403	ENSHGLG00100000518	A1CF	100	88.235	Heterocephalus_glaber_male
ENSMPUG00000016971	A1CF	100	65.033	ENSHCOG00000017669	a1cf	100	67.863	Hippocampus_comes
ENSMPUG00000016971	A1CF	92	74.910	ENSIPUG00000010367	a1cf	99	74.865	Ictalurus_punctatus
ENSMPUG00000016971	A1CF	100	71.220	ENSKMAG00000006568	a1cf	100	71.870	Kryptolebias_marmoratus
ENSMPUG00000016971	A1CF	99	70.540	ENSLBEG00000020994	a1cf	98	71.664	Labrus_bergylta
ENSMPUG00000016971	A1CF	100	75.503	ENSLACG00000008061	A1CF	100	75.000	Latimeria_chalumnae
ENSMPUG00000016971	A1CF	100	76.214	ENSLOCG00000006302	a1cf	100	75.879	Lepisosteus_oculatus
ENSMPUG00000016971	A1CF	100	88.235	ENSLAFG00000015462	A1CF	100	88.403	Loxodonta_africana
ENSMPUG00000016971	A1CF	100	89.020	ENSMFAG00000035948	A1CF	100	89.020	Macaca_fascicularis
ENSMPUG00000016971	A1CF	100	89.020	ENSMMUG00000007077	A1CF	100	89.020	Macaca_mulatta
ENSMPUG00000016971	A1CF	100	88.682	ENSMNEG00000031454	A1CF	100	88.682	Macaca_nemestrina
ENSMPUG00000016971	A1CF	100	90.203	ENSMLEG00000037223	A1CF	100	90.203	Mandrillus_leucophaeus
ENSMPUG00000016971	A1CF	100	67.921	ENSMAMG00000010402	a1cf	100	70.098	Mastacembelus_armatus
ENSMPUG00000016971	A1CF	100	70.017	ENSMZEG00005013245	a1cf	100	71.022	Maylandia_zebra
ENSMPUG00000016971	A1CF	100	82.492	ENSMGAG00000001507	A1CF	100	81.818	Meleagris_gallopavo
ENSMPUG00000016971	A1CF	100	86.723	ENSMAUG00000007422	A1cf	100	86.723	Mesocricetus_auratus
ENSMPUG00000016971	A1CF	100	87.625	ENSMICG00000003377	A1CF	100	87.458	Microcebus_murinus
ENSMPUG00000016971	A1CF	100	86.555	ENSMOCG00000021536	A1cf	100	86.723	Microtus_ochrogaster
ENSMPUG00000016971	A1CF	100	62.069	ENSMMOG00000009422	a1cf	100	64.145	Mola_mola
ENSMPUG00000016971	A1CF	92	83.119	ENSMODG00000016478	A1CF	96	83.650	Monodelphis_domestica
ENSMPUG00000016971	A1CF	100	68.007	ENSMALG00000012992	a1cf	100	67.504	Monopterus_albus
ENSMPUG00000016971	A1CF	100	86.387	MGP_CAROLIEiJ_G0022873	A1cf	100	86.387	Mus_caroli
ENSMPUG00000016971	A1CF	100	86.387	ENSMUSG00000052595	A1cf	100	86.387	Mus_musculus
ENSMPUG00000016971	A1CF	100	86.050	MGP_PahariEiJ_G0014366	A1cf	100	85.546	Mus_pahari
ENSMPUG00000016971	A1CF	100	85.882	MGP_SPRETEiJ_G0023792	A1cf	100	85.882	Mus_spretus
ENSMPUG00000016971	A1CF	100	88.067	ENSMLUG00000016071	A1CF	100	88.067	Myotis_lucifugus
ENSMPUG00000016971	A1CF	100	88.235	ENSNGAG00000015136	A1cf	100	87.899	Nannospalax_galili
ENSMPUG00000016971	A1CF	100	69.005	ENSNBRG00000001712	a1cf	100	70.636	Neolamprologus_brichardi
ENSMPUG00000016971	A1CF	100	90.588	ENSNLEG00000012028	A1CF	100	90.588	Nomascus_leucogenys
ENSMPUG00000016971	A1CF	94	82.857	ENSMEUG00000015909	A1CF	100	82.500	Notamacropus_eugenii
ENSMPUG00000016971	A1CF	89	77.714	ENSOPRG00000010667	A1CF	96	77.714	Ochotona_princeps
ENSMPUG00000016971	A1CF	100	69.331	ENSONIG00000019105	a1cf	100	70.310	Oreochromis_niloticus
ENSMPUG00000016971	A1CF	78	80.728	ENSOANG00000007360	A1CF	99	80.728	Ornithorhynchus_anatinus
ENSMPUG00000016971	A1CF	100	85.906	ENSOCUG00000011587	A1CF	100	86.074	Oryctolagus_cuniculus
ENSMPUG00000016971	A1CF	100	68.412	ENSORLG00000013342	a1cf	100	67.967	Oryzias_latipes
ENSMPUG00000016971	A1CF	100	69.722	ENSORLG00020000586	a1cf	100	69.558	Oryzias_latipes_hni
ENSMPUG00000016971	A1CF	100	69.558	ENSORLG00015018569	a1cf	100	69.722	Oryzias_latipes_hsok
ENSMPUG00000016971	A1CF	100	68.740	ENSOMEG00000013531	a1cf	100	68.249	Oryzias_melastigma
ENSMPUG00000016971	A1CF	100	88.514	ENSOGAG00000012884	A1CF	100	88.514	Otolemur_garnettii
ENSMPUG00000016971	A1CF	100	88.571	ENSOARG00000013695	A1CF	100	88.571	Ovis_aries
ENSMPUG00000016971	A1CF	97	87.847	ENSPPAG00000028115	A1CF	100	90.283	Pan_paniscus
ENSMPUG00000016971	A1CF	100	89.865	ENSPPRG00000012180	A1CF	100	89.865	Panthera_pardus
ENSMPUG00000016971	A1CF	100	89.865	ENSPTIG00000021223	A1CF	100	89.865	Panthera_tigris_altaica
ENSMPUG00000016971	A1CF	100	90.067	ENSPTRG00000002508	A1CF	100	89.899	Pan_troglodytes
ENSMPUG00000016971	A1CF	100	89.020	ENSPANG00000021988	A1CF	100	89.020	Papio_anubis
ENSMPUG00000016971	A1CF	100	75.084	ENSPKIG00000025176	a1cf	100	74.582	Paramormyrops_kingsleyae
ENSMPUG00000016971	A1CF	100	81.113	ENSPSIG00000010318	A1CF	100	80.607	Pelodiscus_sinensis
ENSMPUG00000016971	A1CF	89	65.333	ENSPMGG00000013359	a1cf	99	62.093	Periophthalmus_magnuspinnatus
ENSMPUG00000016971	A1CF	100	87.731	ENSPEMG00000015021	A1cf	100	87.395	Peromyscus_maniculatus_bairdii
ENSMPUG00000016971	A1CF	100	83.474	ENSPCIG00000002175	A1CF	100	83.137	Phascolarctos_cinereus
ENSMPUG00000016971	A1CF	100	70.521	ENSPFOG00000007437	-	100	72.150	Poecilia_formosa
ENSMPUG00000016971	A1CF	100	70.684	ENSPFOG00000006683	a1cf	100	72.313	Poecilia_formosa
ENSMPUG00000016971	A1CF	100	69.381	ENSPLAG00000000026	a1cf	100	71.010	Poecilia_latipinna
ENSMPUG00000016971	A1CF	100	69.381	ENSPLAG00000001210	-	100	71.010	Poecilia_latipinna
ENSMPUG00000016971	A1CF	100	62.092	ENSPMEG00000000921	a1cf	100	63.562	Poecilia_mexicana
ENSMPUG00000016971	A1CF	100	63.235	ENSPMEG00000015529	-	100	64.706	Poecilia_mexicana
ENSMPUG00000016971	A1CF	100	70.847	ENSPREG00000016298	a1cf	100	72.150	Poecilia_reticulata
ENSMPUG00000016971	A1CF	100	89.076	ENSPPYG00000002819	A1CF	100	89.076	Pongo_abelii
ENSMPUG00000016971	A1CF	79	73.093	ENSPCAG00000006463	A1CF	70	91.837	Procavia_capensis
ENSMPUG00000016971	A1CF	100	89.094	ENSPCOG00000024172	A1CF	100	89.094	Propithecus_coquereli
ENSMPUG00000016971	A1CF	100	69.984	ENSPNYG00000017944	a1cf	100	71.615	Pundamilia_nyererei
ENSMPUG00000016971	A1CF	100	73.841	ENSPNAG00000007704	a1cf	100	73.675	Pygocentrus_nattereri
ENSMPUG00000016971	A1CF	100	85.042	ENSRNOG00000033195	A1cf	100	85.042	Rattus_norvegicus
ENSMPUG00000016971	A1CF	100	85.017	ENSRBIG00000042892	A1CF	98	88.554	Rhinopithecus_bieti
ENSMPUG00000016971	A1CF	100	90.372	ENSRROG00000041398	A1CF	100	90.372	Rhinopithecus_roxellana
ENSMPUG00000016971	A1CF	100	90.084	ENSSBOG00000021930	A1CF	100	90.084	Saimiri_boliviensis_boliviensis
ENSMPUG00000016971	A1CF	100	83.474	ENSSHAG00000005096	A1CF	100	83.474	Sarcophilus_harrisii
ENSMPUG00000016971	A1CF	100	73.964	ENSSFOG00015011774	a1cf	100	73.798	Scleropages_formosus
ENSMPUG00000016971	A1CF	100	69.870	ENSSMAG00000013271	a1cf	100	70.033	Scophthalmus_maximus
ENSMPUG00000016971	A1CF	100	70.647	ENSSDUG00000013930	a1cf	100	71.144	Seriola_dumerili
ENSMPUG00000016971	A1CF	100	63.861	ENSSLDG00000004290	a1cf	100	64.686	Seriola_lalandi_dorsalis
ENSMPUG00000016971	A1CF	95	76.678	ENSSARG00000005940	A1CF	96	77.032	Sorex_araneus
ENSMPUG00000016971	A1CF	95	81.272	ENSSPUG00000006797	A1CF	95	81.272	Sphenodon_punctatus
ENSMPUG00000016971	A1CF	100	88.908	ENSSSCG00000010431	A1CF	100	88.739	Sus_scrofa
ENSMPUG00000016971	A1CF	100	81.773	ENSTGUG00000005090	A1CF	100	81.773	Taeniopygia_guttata
ENSMPUG00000016971	A1CF	100	69.331	ENSTRUG00000001982	a1cf	100	69.005	Takifugu_rubripes
ENSMPUG00000016971	A1CF	100	69.756	ENSTNIG00000003580	a1cf	100	69.268	Tetraodon_nigroviridis
ENSMPUG00000016971	A1CF	97	83.882	ENSTTRG00000013190	A1CF	95	83.882	Tursiops_truncatus
ENSMPUG00000016971	A1CF	100	89.865	ENSUAMG00000020065	A1CF	100	89.865	Ursus_americanus
ENSMPUG00000016971	A1CF	100	90.878	ENSUMAG00000011162	A1CF	100	90.878	Ursus_maritimus
ENSMPUG00000016971	A1CF	84	84.752	ENSVPAG00000006130	A1CF	83	84.554	Vicugna_pacos
ENSMPUG00000016971	A1CF	100	89.696	ENSVVUG00000002504	A1CF	100	89.696	Vulpes_vulpes
ENSMPUG00000016971	A1CF	100	72.529	ENSXETG00000006611	a1cf	100	72.027	Xenopus_tropicalis
ENSMPUG00000016971	A1CF	100	70.656	ENSXCOG00000003302	a1cf	100	71.803	Xiphophorus_couchianus
ENSMPUG00000016971	A1CF	100	71.803	ENSXMAG00000016703	a1cf	100	72.951	Xiphophorus_maculatus