EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMPUG00000017423 (Gene tree)
Gene ID: 101683575
Gene Symbol: SMARCA1
Alias: ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SWI|hSNF2L
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 1
Gene Type: protein_coding
Species: Mustela_putorius_furo
Status: putative
Strand: Minus strand
Length: 73329 bases
Position: chrGL897257.1:56822-130150
Accession: 101683575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMPUP00000017313	ResIII	PF04851.15	1.5e-12	1	1
ENSMPUP00000017313	DEAD	PF00270.29	2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMPUT00000017569	SMARCA1-201	3416	XM_004780528	ENSMPUP00000017313	1132 (aa)	XP_004780585	M3Z151

Gene Model

Click here to download ENSMPUG00000017423's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMPUG00000017423's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMPUG00000017423	SMARCA1	51	43.739	ENSMPUG00000000615	CHD1L	61	43.739

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMPUG00000017423	SMARCA1	95	98.224	ENSG00000102038	SMARCA1	100	98.224	Homo_sapiens
ENSMPUG00000017423	SMARCA1	87	82.794	ENSAPOG00000016035	smarca5	98	83.153	Acanthochromis_polyacanthus
ENSMPUG00000017423	SMARCA1	95	98.224	ENSAMEG00000015218	SMARCA1	100	98.224	Ailuropoda_melanoleuca
ENSMPUG00000017423	SMARCA1	81	83.169	ENSACIG00000016982	smarca5	99	83.260	Amphilophus_citrinellus
ENSMPUG00000017423	SMARCA1	87	82.794	ENSAOCG00000015578	smarca5	95	81.836	Amphiprion_ocellaris
ENSMPUG00000017423	SMARCA1	87	82.794	ENSAPEG00000011117	smarca5	99	83.140	Amphiprion_percula
ENSMPUG00000017423	SMARCA1	88	82.394	ENSATEG00000012894	smarca5	95	81.836	Anabas_testudineus
ENSMPUG00000017423	SMARCA1	88	91.851	ENSAPLG00000013149	SMARCA1	100	91.851	Anas_platyrhynchos
ENSMPUG00000017423	SMARCA1	92	88.388	ENSACAG00000011376	SMARCA1	95	90.208	Anolis_carolinensis
ENSMPUG00000017423	SMARCA1	93	93.333	ENSANAG00000023098	SMARCA1	100	93.084	Aotus_nancymaae
ENSMPUG00000017423	SMARCA1	91	80.407	ENSACLG00000025356	smarca5	95	82.236	Astatotilapia_calliptera
ENSMPUG00000017423	SMARCA1	92	80.153	ENSAMXG00000005709	smarca5	94	83.080	Astyanax_mexicanus
ENSMPUG00000017423	SMARCA1	83	87.155	ENSAMXG00000011227	smarca1	99	88.650	Astyanax_mexicanus
ENSMPUG00000017423	SMARCA1	94	96.639	ENSBTAG00000002292	SMARCA1	99	97.810	Bos_taurus
ENSMPUG00000017423	SMARCA1	88	62.475	WBGene00002169	isw-1	97	62.475	Caenorhabditis_elegans
ENSMPUG00000017423	SMARCA1	95	97.944	ENSCJAG00000002868	SMARCA1	100	97.944	Callithrix_jacchus
ENSMPUG00000017423	SMARCA1	95	89.684	ENSCAFG00000018673	SMARCA1	100	89.684	Canis_familiaris
ENSMPUG00000017423	SMARCA1	95	98.505	ENSCAFG00020001751	SMARCA1	100	98.505	Canis_lupus_dingo
ENSMPUG00000017423	SMARCA1	98	95.848	ENSCHIG00000009837	SMARCA1	99	97.810	Capra_hircus
ENSMPUG00000017423	SMARCA1	91	96.699	ENSTSYG00000004240	SMARCA1	98	96.479	Carlito_syrichta
ENSMPUG00000017423	SMARCA1	95	93.773	ENSCPOG00000013601	SMARCA1	94	97.368	Cavia_porcellus
ENSMPUG00000017423	SMARCA1	95	94.953	ENSCCAG00000030817	SMARCA1	100	94.953	Cebus_capucinus
ENSMPUG00000017423	SMARCA1	95	98.224	ENSCATG00000015921	SMARCA1	100	98.224	Cercocebus_atys
ENSMPUG00000017423	SMARCA1	95	95.327	ENSCLAG00000002171	SMARCA1	99	96.371	Chinchilla_lanigera
ENSMPUG00000017423	SMARCA1	95	97.103	ENSCSAG00000008460	SMARCA1	100	97.103	Chlorocebus_sabaeus
ENSMPUG00000017423	SMARCA1	89	91.609	ENSCPBG00000001146	SMARCA1	94	91.691	Chrysemys_picta_bellii
ENSMPUG00000017423	SMARCA1	88	72.410	ENSCING00000004110	swi/snf	98	72.410	Ciona_intestinalis
ENSMPUG00000017423	SMARCA1	87	72.515	ENSCSAVG00000004620	-	100	73.407	Ciona_savignyi
ENSMPUG00000017423	SMARCA1	95	98.131	ENSCANG00000007183	SMARCA1	100	98.131	Colobus_angolensis_palliatus
ENSMPUG00000017423	SMARCA1	95	93.371	ENSCGRG00001010776	Smarca1	100	93.744	Cricetulus_griseus_chok1gshd
ENSMPUG00000017423	SMARCA1	88	95.678	ENSCGRG00000015301	Smarca1	98	96.154	Cricetulus_griseus_crigri
ENSMPUG00000017423	SMARCA1	87	82.794	ENSCSEG00000000328	smarca5	95	82.036	Cynoglossus_semilaevis
ENSMPUG00000017423	SMARCA1	88	82.193	ENSCVAG00000008668	smarca5	99	82.695	Cyprinodon_variegatus
ENSMPUG00000017423	SMARCA1	90	80.313	ENSDARG00000052348	smarca5	95	81.718	Danio_rerio
ENSMPUG00000017423	SMARCA1	88	84.277	ENSDARG00000012776	smarca1	97	84.277	Danio_rerio
ENSMPUG00000017423	SMARCA1	92	94.938	ENSDNOG00000004315	SMARCA1	99	94.938	Dasypus_novemcinctus
ENSMPUG00000017423	SMARCA1	92	94.747	ENSDORG00000009270	Smarca1	99	94.556	Dipodomys_ordii
ENSMPUG00000017423	SMARCA1	87	72.295	FBgn0011604	Iswi	98	71.665	Drosophila_melanogaster
ENSMPUG00000017423	SMARCA1	73	92.857	ENSETEG00000017426	SMARCA1	85	92.857	Echinops_telfairi
ENSMPUG00000017423	SMARCA1	88	79.818	ENSEBUG00000001239	smarca5	96	79.818	Eptatretus_burgeri
ENSMPUG00000017423	SMARCA1	91	93.462	ENSEASG00005008218	SMARCA1	99	94.930	Equus_asinus_asinus
ENSMPUG00000017423	SMARCA1	95	97.484	ENSECAG00000012106	SMARCA1	100	97.484	Equus_caballus
ENSMPUG00000017423	SMARCA1	71	97.682	ENSEEUG00000014927	SMARCA1	83	97.682	Erinaceus_europaeus
ENSMPUG00000017423	SMARCA1	89	85.123	ENSELUG00000010515	smarca1	98	85.294	Esox_lucius
ENSMPUG00000017423	SMARCA1	95	99.252	ENSFCAG00000018496	SMARCA1	100	99.252	Felis_catus
ENSMPUG00000017423	SMARCA1	82	91.784	ENSFALG00000000209	SMARCA1	98	91.883	Ficedula_albicollis
ENSMPUG00000017423	SMARCA1	88	97.881	ENSFDAG00000009818	SMARCA1	97	97.881	Fukomys_damarensis
ENSMPUG00000017423	SMARCA1	88	82.596	ENSFHEG00000007687	smarca5	94	82.036	Fundulus_heteroclitus
ENSMPUG00000017423	SMARCA1	89	89.652	ENSGALG00000008431	SMARCA1	96	91.582	Gallus_gallus
ENSMPUG00000017423	SMARCA1	88	82.596	ENSGAFG00000017731	smarca5	95	82.036	Gambusia_affinis
ENSMPUG00000017423	SMARCA1	87	92.276	ENSGAGG00000023575	SMARCA1	100	92.276	Gopherus_agassizii
ENSMPUG00000017423	SMARCA1	66	96.000	ENSGGOG00000012841	-	95	96.000	Gorilla_gorilla
ENSMPUG00000017423	SMARCA1	95	95.421	ENSHGLG00000003080	SMARCA1	99	96.562	Heterocephalus_glaber_female
ENSMPUG00000017423	SMARCA1	89	95.262	ENSHGLG00100001102	SMARCA1	100	95.262	Heterocephalus_glaber_male
ENSMPUG00000017423	SMARCA1	87	82.626	ENSHCOG00000005458	smarca5	95	81.936	Hippocampus_comes
ENSMPUG00000017423	SMARCA1	90	83.953	ENSIPUG00000016905	Smarca1	99	85.671	Ictalurus_punctatus
ENSMPUG00000017423	SMARCA1	91	79.768	ENSIPUG00000005229	SMARCA5	97	81.764	Ictalurus_punctatus
ENSMPUG00000017423	SMARCA1	95	96.449	ENSSTOG00000014524	SMARCA1	100	96.449	Ictidomys_tridecemlineatus
ENSMPUG00000017423	SMARCA1	95	94.419	ENSJJAG00000002593	Smarca1	100	94.326	Jaculus_jaculus
ENSMPUG00000017423	SMARCA1	87	82.828	ENSKMAG00000003777	smarca5	95	82.136	Kryptolebias_marmoratus
ENSMPUG00000017423	SMARCA1	83	82.927	ENSLBEG00000013295	SMARCA1	100	83.811	Labrus_bergylta
ENSMPUG00000017423	SMARCA1	88	81.737	ENSLBEG00000018112	smarca5	95	81.737	Labrus_bergylta
ENSMPUG00000017423	SMARCA1	91	87.914	ENSLACG00000016697	SMARCA1	98	88.823	Latimeria_chalumnae
ENSMPUG00000017423	SMARCA1	89	87.599	ENSLOCG00000014591	smarca1	97	87.599	Lepisosteus_oculatus
ENSMPUG00000017423	SMARCA1	89	95.285	ENSLAFG00000000896	SMARCA1	100	95.285	Loxodonta_africana
ENSMPUG00000017423	SMARCA1	98	96.320	ENSMFAG00000002117	SMARCA1	100	98.224	Macaca_fascicularis
ENSMPUG00000017423	SMARCA1	95	98.224	ENSMMUG00000008818	SMARCA1	100	98.224	Macaca_mulatta
ENSMPUG00000017423	SMARCA1	95	98.224	ENSMNEG00000041768	SMARCA1	100	98.224	Macaca_nemestrina
ENSMPUG00000017423	SMARCA1	95	98.131	ENSMLEG00000043198	SMARCA1	100	98.131	Mandrillus_leucophaeus
ENSMPUG00000017423	SMARCA1	88	82.797	ENSMAMG00000014294	smarca5	96	81.800	Mastacembelus_armatus
ENSMPUG00000017423	SMARCA1	91	80.407	ENSMZEG00005009369	smarca5	95	82.236	Maylandia_zebra
ENSMPUG00000017423	SMARCA1	90	91.034	ENSMGAG00000007042	SMARCA1	99	91.197	Meleagris_gallopavo
ENSMPUG00000017423	SMARCA1	92	96.275	ENSMAUG00000008133	Smarca1	99	96.275	Mesocricetus_auratus
ENSMPUG00000017423	SMARCA1	95	97.757	ENSMICG00000015768	SMARCA1	100	97.757	Microcebus_murinus
ENSMPUG00000017423	SMARCA1	95	94.419	ENSMOCG00000009464	Smarca1	99	95.989	Microtus_ochrogaster
ENSMPUG00000017423	SMARCA1	88	80.240	ENSMMOG00000005547	smarca5	99	80.240	Mola_mola
ENSMPUG00000017423	SMARCA1	92	88.528	ENSMODG00000013187	-	99	88.421	Monodelphis_domestica
ENSMPUG00000017423	SMARCA1	87	82.424	ENSMALG00000002081	smarca5	97	82.012	Monopterus_albus
ENSMPUG00000017423	SMARCA1	95	94.605	MGP_CAROLIEiJ_G0033034	Smarca1	100	95.319	Mus_caroli
ENSMPUG00000017423	SMARCA1	95	94.605	ENSMUSG00000031099	Smarca1	100	95.319	Mus_musculus
ENSMPUG00000017423	SMARCA1	95	94.512	MGP_PahariEiJ_G0031579	Smarca1	100	95.319	Mus_pahari
ENSMPUG00000017423	SMARCA1	95	94.698	MGP_SPRETEiJ_G0034192	Smarca1	100	95.449	Mus_spretus
ENSMPUG00000017423	SMARCA1	93	95.252	ENSMLUG00000029614	SMARCA1	100	94.123	Myotis_lucifugus
ENSMPUG00000017423	SMARCA1	92	96.753	ENSNGAG00000006492	Smarca1	99	96.753	Nannospalax_galili
ENSMPUG00000017423	SMARCA1	88	82.897	ENSNBRG00000004463	smarca5	99	82.335	Neolamprologus_brichardi
ENSMPUG00000017423	SMARCA1	95	97.570	ENSNLEG00000015179	SMARCA1	100	97.570	Nomascus_leucogenys
ENSMPUG00000017423	SMARCA1	84	81.933	ENSMEUG00000008819	SMARCA1	99	81.914	Notamacropus_eugenii
ENSMPUG00000017423	SMARCA1	92	96.275	ENSODEG00000012163	SMARCA1	99	96.275	Octodon_degus
ENSMPUG00000017423	SMARCA1	91	80.504	ENSONIG00000009993	smarca5	95	82.335	Oreochromis_niloticus
ENSMPUG00000017423	SMARCA1	87	92.378	ENSOANG00000002862	SMARCA1	100	92.378	Ornithorhynchus_anatinus
ENSMPUG00000017423	SMARCA1	95	94.019	ENSOCUG00000001047	SMARCA1	100	93.645	Oryctolagus_cuniculus
ENSMPUG00000017423	SMARCA1	87	82.727	ENSORLG00000021998	smarca5	95	82.036	Oryzias_latipes
ENSMPUG00000017423	SMARCA1	87	82.828	ENSORLG00020017679	smarca5	95	82.136	Oryzias_latipes_hni
ENSMPUG00000017423	SMARCA1	87	82.727	ENSORLG00015017210	smarca5	95	81.936	Oryzias_latipes_hsok
ENSMPUG00000017423	SMARCA1	87	82.727	ENSOMEG00000000086	smarca5	95	81.936	Oryzias_melastigma
ENSMPUG00000017423	SMARCA1	92	97.899	ENSOGAG00000004399	SMARCA1	99	97.899	Otolemur_garnettii
ENSMPUG00000017423	SMARCA1	89	97.631	ENSOARG00000014638	SMARCA1	100	97.883	Ovis_aries
ENSMPUG00000017423	SMARCA1	95	98.224	ENSPPAG00000034647	SMARCA1	100	98.224	Pan_paniscus
ENSMPUG00000017423	SMARCA1	95	99.439	ENSPPRG00000008929	SMARCA1	100	99.439	Panthera_pardus
ENSMPUG00000017423	SMARCA1	89	97.839	ENSPTIG00000000915	SMARCA1	98	97.839	Panthera_tigris_altaica
ENSMPUG00000017423	SMARCA1	98	96.589	ENSPTRG00000049876	SMARCA1	100	98.224	Pan_troglodytes
ENSMPUG00000017423	SMARCA1	95	98.224	ENSPANG00000003871	SMARCA1	100	98.224	Papio_anubis
ENSMPUG00000017423	SMARCA1	84	85.714	ENSPKIG00000013411	smarca1	98	85.553	Paramormyrops_kingsleyae
ENSMPUG00000017423	SMARCA1	89	91.807	ENSPSIG00000010101	SMARCA1	100	91.972	Pelodiscus_sinensis
ENSMPUG00000017423	SMARCA1	92	96.848	ENSPEMG00000017503	Smarca1	99	96.848	Peromyscus_maniculatus_bairdii
ENSMPUG00000017423	SMARCA1	89	90.918	ENSPCIG00000015460	SMARCA1	98	90.999	Phascolarctos_cinereus
ENSMPUG00000017423	SMARCA1	87	82.828	ENSPFOG00000007649	smarca5	95	82.036	Poecilia_formosa
ENSMPUG00000017423	SMARCA1	87	82.828	ENSPLAG00000003363	smarca5	95	82.036	Poecilia_latipinna
ENSMPUG00000017423	SMARCA1	87	82.727	ENSPMEG00000019849	smarca5	95	81.936	Poecilia_mexicana
ENSMPUG00000017423	SMARCA1	87	82.727	ENSPREG00000023250	smarca5	95	81.936	Poecilia_reticulata
ENSMPUG00000017423	SMARCA1	95	94.486	ENSPPYG00000020703	SMARCA1	100	94.486	Pongo_abelii
ENSMPUG00000017423	SMARCA1	72	89.189	ENSPCOG00000020722	SMARCA1	94	91.775	Propithecus_coquereli
ENSMPUG00000017423	SMARCA1	87	98.069	ENSPVAG00000003805	SMARCA1	94	98.069	Pteropus_vampyrus
ENSMPUG00000017423	SMARCA1	52	84.658	ENSPNYG00000012299	smarca5	92	83.467	Pundamilia_nyererei
ENSMPUG00000017423	SMARCA1	95	95.234	ENSRNOG00000003762	Smarca1	100	95.047	Rattus_norvegicus
ENSMPUG00000017423	SMARCA1	95	98.131	ENSRROG00000034167	SMARCA1	100	98.131	Rhinopithecus_roxellana
ENSMPUG00000017423	SMARCA1	91	97.292	ENSSBOG00000020641	SMARCA1	100	97.581	Saimiri_boliviensis_boliviensis
ENSMPUG00000017423	SMARCA1	87	85.482	ENSSHAG00000013518	SMARCA1	99	85.482	Sarcophilus_harrisii
ENSMPUG00000017423	SMARCA1	92	84.145	ENSSFOG00015009043	smarca1	98	86.436	Scleropages_formosus
ENSMPUG00000017423	SMARCA1	90	80.705	ENSSFOG00015016794	smarca5	100	82.688	Scleropages_formosus
ENSMPUG00000017423	SMARCA1	88	81.582	ENSSMAG00000004801	smarca5	95	81.582	Scophthalmus_maximus
ENSMPUG00000017423	SMARCA1	88	82.294	ENSSDUG00000020690	smarca5	96	81.737	Seriola_dumerili
ENSMPUG00000017423	SMARCA1	88	82.294	ENSSLDG00000025190	smarca5	96	81.737	Seriola_lalandi_dorsalis
ENSMPUG00000017423	SMARCA1	81	90.826	ENSSARG00000000842	SMARCA1	92	90.826	Sorex_araneus
ENSMPUG00000017423	SMARCA1	87	91.001	ENSSPUG00000000590	SMARCA1	94	90.983	Sphenodon_punctatus
ENSMPUG00000017423	SMARCA1	88	82.394	ENSSPAG00000002894	smarca5	97	83.153	Stegastes_partitus
ENSMPUG00000017423	SMARCA1	95	94.781	ENSSSCG00000012649	SMARCA1	99	97.238	Sus_scrofa
ENSMPUG00000017423	SMARCA1	88	91.348	ENSTGUG00000003899	-	100	91.348	Taeniopygia_guttata
ENSMPUG00000017423	SMARCA1	88	82.495	ENSTRUG00000014094	smarca5	95	81.936	Takifugu_rubripes
ENSMPUG00000017423	SMARCA1	87	81.781	ENSTNIG00000017717	smarca5	94	80.938	Tetraodon_nigroviridis
ENSMPUG00000017423	SMARCA1	87	91.102	ENSTBEG00000014973	SMARCA1	99	91.102	Tupaia_belangeri
ENSMPUG00000017423	SMARCA1	87	95.829	ENSTTRG00000006168	SMARCA1	99	95.829	Tursiops_truncatus
ENSMPUG00000017423	SMARCA1	95	98.131	ENSUAMG00000020201	SMARCA1	100	98.131	Ursus_americanus
ENSMPUG00000017423	SMARCA1	89	94.960	ENSUMAG00000004073	SMARCA1	97	99.513	Ursus_maritimus
ENSMPUG00000017423	SMARCA1	73	99.351	ENSVPAG00000010492	-	85	99.351	Vicugna_pacos
ENSMPUG00000017423	SMARCA1	89	98.419	ENSVVUG00000008878	SMARCA1	99	98.419	Vulpes_vulpes
ENSMPUG00000017423	SMARCA1	89	88.469	ENSXETG00000001526	smarca1	99	88.469	Xenopus_tropicalis
ENSMPUG00000017423	SMARCA1	88	82.495	ENSXCOG00000011170	smarca5	98	81.936	Xiphophorus_couchianus
ENSMPUG00000017423	SMARCA1	88	82.495	ENSXMAG00000009678	smarca5	97	83.983	Xiphophorus_maculatus