EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMPUG00000017532 (Gene tree)
Gene ID: 101678854
Gene Symbol: APOBEC1
Alias: -
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 1
Gene Type: protein_coding
Species: Mustela_putorius_furo
Status: putative
Strand: Plus strand
Length: 10375 bases
Position: chrGL896932.1:14038747-14049121
Accession: 101678854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMPUP00000017420	APOBEC_N	PF08210.11	2.7e-28	1	1
ENSMPUP00000017420	APOBEC_C	PF05240.14	1.5e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMPUT00000017678	-	944	-	ENSMPUP00000017420	236 (aa)	-	B2NIW5

Gene Model

Click here to download ENSMPUG00000017532's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMPUG00000017532's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMPUG00000017532	APOBEC1	57	37.383	ENSMPUG00000013239	-	60	37.383

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMPUG00000017532	APOBEC1	100	77.966	ENSG00000111701	APOBEC1	100	77.966	Homo_sapiens
ENSMPUG00000017532	APOBEC1	99	84.979	ENSAMEG00000007098	APOBEC1	99	84.979	Ailuropoda_melanoleuca
ENSMPUG00000017532	APOBEC1	71	42.262	ENSACAG00000028578	-	89	42.262	Anolis_carolinensis
ENSMPUG00000017532	APOBEC1	100	75.000	ENSANAG00000027743	APOBEC1	95	75.000	Aotus_nancymaae
ENSMPUG00000017532	APOBEC1	100	74.153	ENSBTAG00000014683	APOBEC1	100	74.153	Bos_taurus
ENSMPUG00000017532	APOBEC1	94	73.756	ENSCJAG00000005398	APOBEC1	100	73.756	Callithrix_jacchus
ENSMPUG00000017532	APOBEC1	100	85.169	ENSCAFG00000013901	APOBEC1	100	85.169	Canis_familiaris
ENSMPUG00000017532	APOBEC1	96	83.186	ENSCAFG00020003511	APOBEC1	95	83.186	Canis_lupus_dingo
ENSMPUG00000017532	APOBEC1	98	72.727	ENSCHIG00000011898	APOBEC1	96	72.727	Capra_hircus
ENSMPUG00000017532	APOBEC1	59	81.295	ENSTSYG00000029141	APOBEC1	99	81.295	Carlito_syrichta
ENSMPUG00000017532	APOBEC1	91	65.581	ENSCAPG00000015882	-	100	65.581	Cavia_aperea
ENSMPUG00000017532	APOBEC1	99	64.681	ENSCPOG00000033068	APOBEC1	99	64.681	Cavia_porcellus
ENSMPUG00000017532	APOBEC1	100	75.000	ENSCCAG00000022258	APOBEC1	100	75.000	Cebus_capucinus
ENSMPUG00000017532	APOBEC1	100	78.390	ENSCATG00000021613	APOBEC1	95	78.390	Cercocebus_atys
ENSMPUG00000017532	APOBEC1	97	68.261	ENSCLAG00000014645	APOBEC1	100	68.261	Chinchilla_lanigera
ENSMPUG00000017532	APOBEC1	81	77.895	ENSCSAG00000009817	APOBEC1	99	77.895	Chlorocebus_sabaeus
ENSMPUG00000017532	APOBEC1	77	44.920	ENSCPBG00000017398	-	82	44.920	Chrysemys_picta_bellii
ENSMPUG00000017532	APOBEC1	78	45.455	ENSCPBG00000014335	-	76	45.455	Chrysemys_picta_bellii
ENSMPUG00000017532	APOBEC1	98	39.574	ENSCPBG00000014331	-	94	39.574	Chrysemys_picta_bellii
ENSMPUG00000017532	APOBEC1	83	46.429	ENSCPBG00000014329	-	54	46.429	Chrysemys_picta_bellii
ENSMPUG00000017532	APOBEC1	79	46.277	ENSCPBG00000014328	-	82	46.277	Chrysemys_picta_bellii
ENSMPUG00000017532	APOBEC1	89	36.967	ENSCPBG00000014327	-	82	36.967	Chrysemys_picta_bellii
ENSMPUG00000017532	APOBEC1	97	77.826	ENSCANG00000038359	APOBEC1	100	77.826	Colobus_angolensis_palliatus
ENSMPUG00000017532	APOBEC1	97	68.122	ENSCGRG00001011130	Apobec1	100	68.122	Cricetulus_griseus_chok1gshd
ENSMPUG00000017532	APOBEC1	97	68.122	ENSCGRG00000008644	Apobec1	100	68.122	Cricetulus_griseus_crigri
ENSMPUG00000017532	APOBEC1	100	73.729	ENSDNOG00000010926	APOBEC1	100	73.729	Dasypus_novemcinctus
ENSMPUG00000017532	APOBEC1	90	68.692	ENSDORG00000023717	Apobec1	100	68.692	Dipodomys_ordii
ENSMPUG00000017532	APOBEC1	97	73.043	ENSETEG00000004867	APOBEC1	97	73.043	Echinops_telfairi
ENSMPUG00000017532	APOBEC1	99	79.828	ENSEASG00005015951	APOBEC1	98	79.828	Equus_asinus_asinus
ENSMPUG00000017532	APOBEC1	81	79.474	ENSECAG00000017163	APOBEC1	99	79.474	Equus_caballus
ENSMPUG00000017532	APOBEC1	91	64.352	ENSEEUG00000009112	-	96	64.352	Erinaceus_europaeus
ENSMPUG00000017532	APOBEC1	86	52.941	ENSEEUG00000007530	-	97	52.941	Erinaceus_europaeus
ENSMPUG00000017532	APOBEC1	100	87.288	ENSFCAG00000009350	APOBEC1	100	87.288	Felis_catus
ENSMPUG00000017532	APOBEC1	60	46.479	ENSFALG00000007257	-	70	46.479	Ficedula_albicollis
ENSMPUG00000017532	APOBEC1	88	56.522	ENSFDAG00000018470	APOBEC1	99	56.522	Fukomys_damarensis
ENSMPUG00000017532	APOBEC1	92	47.489	ENSGAGG00000011837	-	90	48.603	Gopherus_agassizii
ENSMPUG00000017532	APOBEC1	76	39.344	ENSGAGG00000021745	-	68	39.344	Gopherus_agassizii
ENSMPUG00000017532	APOBEC1	79	42.246	ENSGAGG00000021744	-	73	42.246	Gopherus_agassizii
ENSMPUG00000017532	APOBEC1	68	48.447	ENSGAGG00000006624	-	58	48.447	Gopherus_agassizii
ENSMPUG00000017532	APOBEC1	68	47.531	ENSGAGG00000004947	-	80	51.200	Gopherus_agassizii
ENSMPUG00000017532	APOBEC1	99	61.702	ENSHGLG00000001495	APOBEC1	99	61.702	Heterocephalus_glaber_female
ENSMPUG00000017532	APOBEC1	99	60.000	ENSHGLG00100002187	APOBEC1	99	60.000	Heterocephalus_glaber_male
ENSMPUG00000017532	APOBEC1	91	63.256	ENSSTOG00000021971	APOBEC1	100	80.612	Ictidomys_tridecemlineatus
ENSMPUG00000017532	APOBEC1	97	74.672	ENSJJAG00000022108	Apobec1	100	74.672	Jaculus_jaculus
ENSMPUG00000017532	APOBEC1	94	75.336	ENSLAFG00000030837	APOBEC1	100	75.336	Loxodonta_africana
ENSMPUG00000017532	APOBEC1	100	78.390	ENSMFAG00000000277	APOBEC1	100	78.390	Macaca_fascicularis
ENSMPUG00000017532	APOBEC1	100	77.966	ENSMNEG00000029670	APOBEC1	100	77.966	Macaca_nemestrina
ENSMPUG00000017532	APOBEC1	100	78.390	ENSMLEG00000036301	APOBEC1	100	78.390	Mandrillus_leucophaeus
ENSMPUG00000017532	APOBEC1	92	68.981	ENSMAUG00000022167	Apobec1	97	68.981	Mesocricetus_auratus
ENSMPUG00000017532	APOBEC1	100	78.390	ENSMICG00000043645	APOBEC1	100	78.390	Microcebus_murinus
ENSMPUG00000017532	APOBEC1	100	63.559	ENSMODG00000018004	APOBEC1	100	63.559	Monodelphis_domestica
ENSMPUG00000017532	APOBEC1	97	69.737	ENSMUSG00000040613	Apobec1	99	71.429	Mus_musculus
ENSMPUG00000017532	APOBEC1	97	67.105	MGP_PahariEiJ_G0022580	-	99	67.105	Mus_pahari
ENSMPUG00000017532	APOBEC1	97	69.737	MGP_SPRETEiJ_G0029857	Apobec1	99	71.429	Mus_spretus
ENSMPUG00000017532	APOBEC1	97	71.616	ENSNGAG00000022607	Apobec1	100	71.616	Nannospalax_galili
ENSMPUG00000017532	APOBEC1	100	78.390	ENSNLEG00000005342	APOBEC1	100	78.390	Nomascus_leucogenys
ENSMPUG00000017532	APOBEC1	100	63.559	ENSMEUG00000013406	APOBEC1	100	63.559	Notamacropus_eugenii
ENSMPUG00000017532	APOBEC1	77	62.431	ENSOPRG00000009508	-	100	62.431	Ochotona_princeps
ENSMPUG00000017532	APOBEC1	100	74.153	ENSOCUG00000025736	APOBEC1	88	74.153	Oryctolagus_cuniculus
ENSMPUG00000017532	APOBEC1	99	77.253	ENSOGAG00000026415	APOBEC1	99	77.253	Otolemur_garnettii
ENSMPUG00000017532	APOBEC1	100	73.305	ENSOARG00000002072	APOBEC1	99	73.305	Ovis_aries
ENSMPUG00000017532	APOBEC1	99	71.245	ENSPPAG00000027657	APOBEC1	99	71.245	Pan_paniscus
ENSMPUG00000017532	APOBEC1	100	87.288	ENSPPRG00000012182	APOBEC1	100	87.288	Panthera_pardus
ENSMPUG00000017532	APOBEC1	100	87.288	ENSPTIG00000020280	APOBEC1	100	87.288	Panthera_tigris_altaica
ENSMPUG00000017532	APOBEC1	100	77.966	ENSPTRG00000004614	APOBEC1	100	77.966	Pan_troglodytes
ENSMPUG00000017532	APOBEC1	100	77.966	ENSPANG00000021027	APOBEC1	100	77.966	Papio_anubis
ENSMPUG00000017532	APOBEC1	57	50.000	ENSPSIG00000012791	-	75	50.000	Pelodiscus_sinensis
ENSMPUG00000017532	APOBEC1	97	40.611	ENSPSIG00000012568	-	96	40.611	Pelodiscus_sinensis
ENSMPUG00000017532	APOBEC1	97	68.122	ENSPEMG00000023841	Apobec1	100	68.122	Peromyscus_maniculatus_bairdii
ENSMPUG00000017532	APOBEC1	100	68.220	ENSPCIG00000023973	APOBEC1	100	68.220	Phascolarctos_cinereus
ENSMPUG00000017532	APOBEC1	100	76.271	ENSPPYG00000004228	APOBEC1	95	76.271	Pongo_abelii
ENSMPUG00000017532	APOBEC1	79	75.936	ENSPCAG00000008733	APOBEC1	100	75.936	Procavia_capensis
ENSMPUG00000017532	APOBEC1	94	79.279	ENSPCOG00000013957	APOBEC1	98	79.279	Propithecus_coquereli
ENSMPUG00000017532	APOBEC1	100	66.102	ENSPVAG00000010709	APOBEC1	100	66.102	Pteropus_vampyrus
ENSMPUG00000017532	APOBEC1	97	68.860	ENSRNOG00000015411	Apobec1	99	68.860	Rattus_norvegicus
ENSMPUG00000017532	APOBEC1	100	77.542	ENSRBIG00000031161	APOBEC1	100	77.542	Rhinopithecus_bieti
ENSMPUG00000017532	APOBEC1	100	77.542	ENSRROG00000033576	APOBEC1	100	77.542	Rhinopithecus_roxellana
ENSMPUG00000017532	APOBEC1	73	75.145	ENSSBOG00000030587	APOBEC1	98	75.145	Saimiri_boliviensis_boliviensis
ENSMPUG00000017532	APOBEC1	96	66.520	ENSSHAG00000008925	APOBEC1	99	66.520	Sarcophilus_harrisii
ENSMPUG00000017532	APOBEC1	56	71.212	ENSSARG00000011972	-	100	71.212	Sorex_araneus
ENSMPUG00000017532	APOBEC1	73	65.698	ENSSARG00000000032	-	100	65.698	Sorex_araneus
ENSMPUG00000017532	APOBEC1	92	40.351	ENSSPUG00000009044	-	86	40.351	Sphenodon_punctatus
ENSMPUG00000017532	APOBEC1	100	80.085	ENSSSCG00000000668	APOBEC1	100	80.085	Sus_scrofa
ENSMPUG00000017532	APOBEC1	61	48.611	ENSTGUG00000013118	-	99	48.611	Taeniopygia_guttata
ENSMPUG00000017532	APOBEC1	94	71.946	ENSTBEG00000010043	APOBEC1	94	71.946	Tupaia_belangeri
ENSMPUG00000017532	APOBEC1	79	73.797	ENSTTRG00000014015	APOBEC1	100	73.797	Tursiops_truncatus
ENSMPUG00000017532	APOBEC1	99	84.549	ENSUAMG00000011636	APOBEC1	95	84.549	Ursus_americanus
ENSMPUG00000017532	APOBEC1	99	84.549	ENSUMAG00000016552	APOBEC1	95	84.549	Ursus_maritimus
ENSMPUG00000017532	APOBEC1	100	75.847	ENSVPAG00000001343	APOBEC1	100	75.847	Vicugna_pacos
ENSMPUG00000017532	APOBEC1	100	85.593	ENSVVUG00000010522	APOBEC1	100	85.593	Vulpes_vulpes