EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMPUG00000018465 (Gene tree)
Gene ID: 101672351
Gene Symbol: PABPC5
Alias: PABP5
Full Name: poly(A) binding protein cytoplasmic 5
Gene Type: protein_coding
Species: Mustela_putorius_furo
Status: putative
Strand: Plus strand
Length: 1149 bases
Position: chrGL897410.1:34380-35528
Accession: 101672351
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMPUP00000018347	RRM_5	PF13893.6	5.9e-11	1	1
ENSMPUP00000018347	RRM_1	PF00076.22	1.3e-79	1	4
ENSMPUP00000018347	RRM_1	PF00076.22	1.3e-79	2	4
ENSMPUP00000018347	RRM_1	PF00076.22	1.3e-79	3	4
ENSMPUP00000018347	RRM_1	PF00076.22	1.3e-79	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMPUT00000018617	PABPC5-201	1149	-	ENSMPUP00000018347	382 (aa)	XP_004782260	M3Z435

Gene Model

Click here to download ENSMPUG00000018465's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMPUG00000018465's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMPUG00000018465	PABPC5	94	35.802	ENSMPUG00000015967	ELAVL2	82	35.802
ENSMPUG00000018465	PABPC5	70	34.483	ENSMPUG00000017153	-	51	34.524
ENSMPUG00000018465	PABPC5	94	64.379	ENSMPUG00000015163	PABPC1	55	64.379
ENSMPUG00000018465	PABPC5	82	40.446	ENSMPUG00000006836	-	52	40.446
ENSMPUG00000018465	PABPC5	96	61.157	ENSMPUG00000017646	PABPC1L	61	61.236
ENSMPUG00000018465	PABPC5	95	67.493	ENSMPUG00000014414	-	56	67.697
ENSMPUG00000018465	PABPC5	74	30.357	ENSMPUG00000015511	TRNAU1AP	55	30.247

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMPUG00000018465	PABPC5	99	96.588	ENSG00000174740	PABPC5	99	96.588	Homo_sapiens
ENSMPUG00000018465	PABPC5	99	98.425	ENSAMEG00000020114	PABPC5	100	98.425	Ailuropoda_melanoleuca
ENSMPUG00000018465	PABPC5	99	96.588	ENSANAG00000005063	PABPC5	99	96.588	Aotus_nancymaae
ENSMPUG00000018465	PABPC5	100	95.812	ENSBTAG00000019942	PABPC5	100	95.812	Bos_taurus
ENSMPUG00000018465	PABPC5	99	96.063	ENSCJAG00000003665	PABPC5	99	96.063	Callithrix_jacchus
ENSMPUG00000018465	PABPC5	100	98.429	ENSCAFG00000017452	PABPC5	100	98.429	Canis_familiaris
ENSMPUG00000018465	PABPC5	100	95.812	ENSCHIG00000019004	PABPC5	100	95.812	Capra_hircus
ENSMPUG00000018465	PABPC5	100	95.812	ENSTSYG00000036351	PABPC5	100	95.812	Carlito_syrichta
ENSMPUG00000018465	PABPC5	99	86.387	ENSCAPG00000010714	PABPC5	100	86.387	Cavia_aperea
ENSMPUG00000018465	PABPC5	100	92.932	ENSCPOG00000002555	PABPC5	100	92.932	Cavia_porcellus
ENSMPUG00000018465	PABPC5	99	96.588	ENSCCAG00000032154	PABPC5	99	96.588	Cebus_capucinus
ENSMPUG00000018465	PABPC5	99	96.588	ENSCATG00000043083	PABPC5	99	96.588	Cercocebus_atys
ENSMPUG00000018465	PABPC5	100	94.764	ENSCLAG00000000647	PABPC5	100	94.764	Chinchilla_lanigera
ENSMPUG00000018465	PABPC5	99	96.588	ENSCSAG00000000065	PABPC5	99	96.588	Chlorocebus_sabaeus
ENSMPUG00000018465	PABPC5	99	96.588	ENSCANG00000011473	PABPC5	99	96.588	Colobus_angolensis_palliatus
ENSMPUG00000018465	PABPC5	100	92.932	ENSCGRG00000018699	Pabpc5	100	92.932	Cricetulus_griseus_crigri
ENSMPUG00000018465	PABPC5	100	77.807	ENSETEG00000011832	PABPC5	100	77.807	Echinops_telfairi
ENSMPUG00000018465	PABPC5	100	97.120	ENSEASG00005014396	PABPC5	100	97.120	Equus_asinus_asinus
ENSMPUG00000018465	PABPC5	100	97.120	ENSECAG00000003452	PABPC5	100	97.120	Equus_caballus
ENSMPUG00000018465	PABPC5	100	98.691	ENSFCAG00000004998	PABPC5	100	98.691	Felis_catus
ENSMPUG00000018465	PABPC5	100	95.288	ENSFDAG00000000126	PABPC5	100	95.288	Fukomys_damarensis
ENSMPUG00000018465	PABPC5	99	96.588	ENSGGOG00000007622	PABPC5	99	96.588	Gorilla_gorilla
ENSMPUG00000018465	PABPC5	95	94.954	ENSJJAG00000011960	Pabpc5	100	94.954	Jaculus_jaculus
ENSMPUG00000018465	PABPC5	99	96.588	ENSMFAG00000024561	PABPC5	99	96.588	Macaca_fascicularis
ENSMPUG00000018465	PABPC5	99	96.588	ENSMMUG00000011562	PABPC5	99	96.588	Macaca_mulatta
ENSMPUG00000018465	PABPC5	99	96.588	ENSMNEG00000037604	PABPC5	99	96.588	Macaca_nemestrina
ENSMPUG00000018465	PABPC5	99	96.588	ENSMLEG00000028318	PABPC5	99	96.588	Mandrillus_leucophaeus
ENSMPUG00000018465	PABPC5	100	95.288	ENSMICG00000041706	PABPC5	100	95.288	Microcebus_murinus
ENSMPUG00000018465	PABPC5	100	94.764	ENSMOCG00000001554	Pabpc5	100	94.764	Microtus_ochrogaster
ENSMPUG00000018465	PABPC5	99	92.895	MGP_CAROLIEiJ_G0033367	Pabpc5	99	92.895	Mus_caroli
ENSMPUG00000018465	PABPC5	99	93.421	ENSMUSG00000034732	Pabpc5	99	93.421	Mus_musculus
ENSMPUG00000018465	PABPC5	100	93.717	MGP_PahariEiJ_G0031908	Pabpc5	100	93.717	Mus_pahari
ENSMPUG00000018465	PABPC5	99	93.421	MGP_SPRETEiJ_G0034533	Pabpc5	99	93.421	Mus_spretus
ENSMPUG00000018465	PABPC5	100	95.812	ENSMLUG00000008244	PABPC5	100	95.812	Myotis_lucifugus
ENSMPUG00000018465	PABPC5	95	94.037	ENSNGAG00000004371	Pabpc5	100	94.037	Nannospalax_galili
ENSMPUG00000018465	PABPC5	99	96.588	ENSNLEG00000035086	PABPC5	99	96.588	Nomascus_leucogenys
ENSMPUG00000018465	PABPC5	98	96.364	ENSOPRG00000000856	PABPC5	99	96.364	Ochotona_princeps
ENSMPUG00000018465	PABPC5	100	96.073	ENSOCUG00000010919	PABPC5	100	96.073	Oryctolagus_cuniculus
ENSMPUG00000018465	PABPC5	100	95.550	ENSOGAG00000006882	PABPC5	100	95.550	Otolemur_garnettii
ENSMPUG00000018465	PABPC5	100	96.073	ENSOARG00000010260	PABPC5	100	96.073	Ovis_aries
ENSMPUG00000018465	PABPC5	99	96.325	ENSPPAG00000007378	PABPC5	99	96.325	Pan_paniscus
ENSMPUG00000018465	PABPC5	100	98.691	ENSPPRG00000010742	PABPC5	100	98.691	Panthera_pardus
ENSMPUG00000018465	PABPC5	100	98.691	ENSPTIG00000001480	PABPC5	100	98.691	Panthera_tigris_altaica
ENSMPUG00000018465	PABPC5	99	96.588	ENSPTRG00000022078	PABPC5	99	96.588	Pan_troglodytes
ENSMPUG00000018465	PABPC5	99	96.588	ENSPANG00000018282	PABPC5	99	96.588	Papio_anubis
ENSMPUG00000018465	PABPC5	100	93.717	ENSPEMG00000000171	Pabpc5	100	93.717	Peromyscus_maniculatus_bairdii
ENSMPUG00000018465	PABPC5	99	96.588	ENSPPYG00000020526	PABPC5	99	96.588	Pongo_abelii
ENSMPUG00000018465	PABPC5	99	95.636	ENSPCAG00000015577	PABPC5	100	95.636	Procavia_capensis
ENSMPUG00000018465	PABPC5	100	96.073	ENSPCOG00000000676	PABPC5	100	96.073	Propithecus_coquereli
ENSMPUG00000018465	PABPC5	100	96.859	ENSPVAG00000006465	PABPC5	100	96.859	Pteropus_vampyrus
ENSMPUG00000018465	PABPC5	100	93.717	ENSRNOG00000003354	Pabpc5	100	93.717	Rattus_norvegicus
ENSMPUG00000018465	PABPC5	99	96.588	ENSRBIG00000011760	PABPC5	99	96.588	Rhinopithecus_bieti
ENSMPUG00000018465	PABPC5	99	96.588	ENSRROG00000036708	PABPC5	99	96.588	Rhinopithecus_roxellana
ENSMPUG00000018465	PABPC5	99	96.588	ENSSBOG00000008658	PABPC5	99	96.588	Saimiri_boliviensis_boliviensis
ENSMPUG00000018465	PABPC5	100	93.717	ENSSARG00000014012	PABPC5	100	93.717	Sorex_araneus
ENSMPUG00000018465	PABPC5	100	96.597	ENSSSCG00000040194	PABPC5	100	96.597	Sus_scrofa
ENSMPUG00000018465	PABPC5	100	96.859	ENSTBEG00000016482	PABPC5	100	96.859	Tupaia_belangeri
ENSMPUG00000018465	PABPC5	100	98.429	ENSUAMG00000013627	PABPC5	100	98.429	Ursus_americanus
ENSMPUG00000018465	PABPC5	100	98.168	ENSUMAG00000023934	PABPC5	100	98.168	Ursus_maritimus
ENSMPUG00000018465	PABPC5	100	96.859	ENSVPAG00000001063	PABPC5	100	96.859	Vicugna_pacos
ENSMPUG00000018465	PABPC5	100	98.691	ENSVVUG00000013172	PABPC5	100	98.691	Vulpes_vulpes