EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000000384 (Gene tree)
Gene ID: 21379
Gene Symbol: Tbrg4
Alias: 2310042P22Rik|Cpr2|TB-12
Full Name: transforming growth factor beta regulated gene 4
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 10470 bases
Position: chr11:6615598-6626067
Accession: 1100868
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000000394	RAP	PF08373.10	1.3e-09	1	1
ENSMUSP00000140835	RAP	PF08373.10	1.3e-09	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25993413	Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression	IC & MEF	2015	Boucas J	DOI: 10.1371/journal.pone.0125745
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000151008	-	652	-	-	- (aa)	-	-
ENSMUST00000156969	-	2324	-	ENSMUSP00000114256	630 (aa)	-	Q91YM4
ENSMUST00000000394	-	2290	-	ENSMUSP00000000394	630 (aa)	-	Q91YM4
ENSMUST00000134016	-	682	-	-	- (aa)	-	-
ENSMUST00000150697	-	2241	-	ENSMUSP00000123131	365 (aa)	-	E9PUT1
ENSMUST00000136682	-	647	-	ENSMUSP00000114174	158 (aa)	-	Q5SWP1
ENSMUST00000144463	-	540	-	ENSMUSP00000120103	112 (aa)	-	Q5SWP0
ENSMUST00000131477	-	582	-	-	- (aa)	-	-
ENSMUST00000132446	-	602	-	-	- (aa)	-	-
ENSMUST00000131815	-	853	-	-	- (aa)	-	-
ENSMUST00000189268	-	2347	XM_006514607	ENSMUSP00000140835	630 (aa)	XP_006514670	Q91YM4
ENSMUST00000131313	-	380	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000000384's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000000384's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000000384	Tbrg4	100	75.355	ENSG00000136270	TBRG4	100	78.058	Homo_sapiens
ENSMUSG00000000384	Tbrg4	91	42.513	ENSAPOG00000000108	tbrg4	91	42.513	Acanthochromis_polyacanthus
ENSMUSG00000000384	Tbrg4	100	72.354	ENSAMEG00000017859	TBRG4	99	72.354	Ailuropoda_melanoleuca
ENSMUSG00000000384	Tbrg4	91	43.696	ENSACIG00000013917	tbrg4	100	42.072	Amphilophus_citrinellus
ENSMUSG00000000384	Tbrg4	91	43.890	ENSAOCG00000000120	tbrg4	87	43.890	Amphiprion_ocellaris
ENSMUSG00000000384	Tbrg4	91	43.890	ENSAPEG00000000413	tbrg4	91	43.890	Amphiprion_percula
ENSMUSG00000000384	Tbrg4	100	42.434	ENSATEG00000002508	tbrg4	91	44.406	Anabas_testudineus
ENSMUSG00000000384	Tbrg4	90	76.460	ENSANAG00000031963	TBRG4	100	75.899	Aotus_nancymaae
ENSMUSG00000000384	Tbrg4	91	44.406	ENSACLG00000006544	tbrg4	100	42.656	Astatotilapia_calliptera
ENSMUSG00000000384	Tbrg4	88	40.598	ENSAMXG00000039340	tbrg4	88	40.598	Astyanax_mexicanus
ENSMUSG00000000384	Tbrg4	100	75.197	ENSBTAG00000010504	TBRG4	100	75.039	Bos_taurus
ENSMUSG00000000384	Tbrg4	100	75.748	ENSCJAG00000011804	TBRG4	100	78.417	Callithrix_jacchus
ENSMUSG00000000384	Tbrg4	100	71.767	ENSCAFG00000003139	TBRG4	100	71.767	Canis_familiaris
ENSMUSG00000000384	Tbrg4	100	71.767	ENSCAFG00020019803	TBRG4	100	71.767	Canis_lupus_dingo
ENSMUSG00000000384	Tbrg4	100	76.619	ENSCHIG00000025024	TBRG4	100	76.461	Capra_hircus
ENSMUSG00000000384	Tbrg4	100	78.515	ENSTSYG00000010348	TBRG4	100	78.515	Carlito_syrichta
ENSMUSG00000000384	Tbrg4	100	71.880	ENSCAPG00000007190	TBRG4	100	71.564	Cavia_aperea
ENSMUSG00000000384	Tbrg4	100	71.880	ENSCPOG00000012294	TBRG4	100	71.722	Cavia_porcellus
ENSMUSG00000000384	Tbrg4	100	75.039	ENSCCAG00000000530	TBRG4	100	78.417	Cebus_capucinus
ENSMUSG00000000384	Tbrg4	100	75.987	ENSCATG00000029779	TBRG4	100	76.259	Cercocebus_atys
ENSMUSG00000000384	Tbrg4	100	74.882	ENSCLAG00000004243	TBRG4	100	74.882	Chinchilla_lanigera
ENSMUSG00000000384	Tbrg4	100	77.251	ENSCSAG00000015722	TBRG4	100	77.251	Chlorocebus_sabaeus
ENSMUSG00000000384	Tbrg4	100	69.510	ENSCHOG00000012010	TBRG4	100	69.510	Choloepus_hoffmanni
ENSMUSG00000000384	Tbrg4	100	77.567	ENSCANG00000027861	TBRG4	100	78.777	Colobus_angolensis_palliatus
ENSMUSG00000000384	Tbrg4	100	87.619	ENSCGRG00001020595	Tbrg4	100	87.619	Cricetulus_griseus_chok1gshd
ENSMUSG00000000384	Tbrg4	100	87.619	ENSCGRG00000004950	Tbrg4	100	87.619	Cricetulus_griseus_crigri
ENSMUSG00000000384	Tbrg4	100	40.310	ENSCSEG00000008459	tbrg4	84	42.832	Cynoglossus_semilaevis
ENSMUSG00000000384	Tbrg4	91	43.718	ENSCVAG00000009862	tbrg4	100	41.770	Cyprinodon_variegatus
ENSMUSG00000000384	Tbrg4	92	44.539	ENSDARG00000074807	tbrg4	91	44.539	Danio_rerio
ENSMUSG00000000384	Tbrg4	100	70.476	ENSDNOG00000008066	TBRG4	100	70.476	Dasypus_novemcinctus
ENSMUSG00000000384	Tbrg4	100	79.147	ENSDORG00000013979	Tbrg4	100	79.147	Dipodomys_ordii
ENSMUSG00000000384	Tbrg4	100	62.835	ENSETEG00000005786	TBRG4	100	62.677	Echinops_telfairi
ENSMUSG00000000384	Tbrg4	78	46.226	ENSEBUG00000010150	-	84	46.226	Eptatretus_burgeri
ENSMUSG00000000384	Tbrg4	100	77.567	ENSEASG00005017915	TBRG4	100	77.567	Equus_asinus_asinus
ENSMUSG00000000384	Tbrg4	100	77.567	ENSECAG00000018271	TBRG4	99	77.567	Equus_caballus
ENSMUSG00000000384	Tbrg4	100	69.984	ENSEEUG00000010826	TBRG4	100	69.984	Erinaceus_europaeus
ENSMUSG00000000384	Tbrg4	100	43.994	ENSELUG00000007298	tbrg4	100	43.701	Esox_lucius
ENSMUSG00000000384	Tbrg4	100	72.670	ENSFCAG00000011641	TBRG4	100	72.670	Felis_catus
ENSMUSG00000000384	Tbrg4	100	70.820	ENSFDAG00000008696	TBRG4	100	70.820	Fukomys_damarensis
ENSMUSG00000000384	Tbrg4	100	42.434	ENSFHEG00000014946	tbrg4	100	42.590	Fundulus_heteroclitus
ENSMUSG00000000384	Tbrg4	100	40.752	ENSGMOG00000016100	tbrg4	92	42.295	Gadus_morhua
ENSMUSG00000000384	Tbrg4	99	49.609	ENSGALG00000038102	TBRG4	90	52.439	Gallus_gallus
ENSMUSG00000000384	Tbrg4	100	41.486	ENSGAFG00000007553	tbrg4	100	41.094	Gambusia_affinis
ENSMUSG00000000384	Tbrg4	100	43.411	ENSGACG00000008909	tbrg4	91	44.881	Gasterosteus_aculeatus
ENSMUSG00000000384	Tbrg4	100	50.706	ENSGAGG00000009922	TBRG4	100	50.706	Gopherus_agassizii
ENSMUSG00000000384	Tbrg4	100	75.829	ENSGGOG00000016517	TBRG4	100	78.417	Gorilla_gorilla
ENSMUSG00000000384	Tbrg4	91	44.406	ENSHBUG00000016854	tbrg4	100	42.656	Haplochromis_burtoni
ENSMUSG00000000384	Tbrg4	100	71.406	ENSHGLG00000013941	TBRG4	100	71.406	Heterocephalus_glaber_female
ENSMUSG00000000384	Tbrg4	100	42.496	ENSHCOG00000014561	tbrg4	100	42.296	Hippocampus_comes
ENSMUSG00000000384	Tbrg4	100	41.966	ENSIPUG00000019857	tbrg4	89	44.248	Ictalurus_punctatus
ENSMUSG00000000384	Tbrg4	100	79.463	ENSSTOG00000008370	TBRG4	100	79.463	Ictidomys_tridecemlineatus
ENSMUSG00000000384	Tbrg4	100	83.886	ENSJJAG00000010349	Tbrg4	100	83.886	Jaculus_jaculus
ENSMUSG00000000384	Tbrg4	100	39.280	ENSKMAG00000005739	tbrg4	100	40.217	Kryptolebias_marmoratus
ENSMUSG00000000384	Tbrg4	91	41.538	ENSLBEG00000023721	tbrg4	100	39.969	Labrus_bergylta
ENSMUSG00000000384	Tbrg4	100	46.759	ENSLOCG00000005721	tbrg4	100	45.917	Lepisosteus_oculatus
ENSMUSG00000000384	Tbrg4	100	71.248	ENSLAFG00000015721	TBRG4	100	71.090	Loxodonta_africana
ENSMUSG00000000384	Tbrg4	100	77.093	ENSMFAG00000032141	TBRG4	100	77.093	Macaca_fascicularis
ENSMUSG00000000384	Tbrg4	100	76.935	ENSMMUG00000010823	TBRG4	100	76.935	Macaca_mulatta
ENSMUSG00000000384	Tbrg4	100	77.093	ENSMNEG00000042855	TBRG4	100	77.093	Macaca_nemestrina
ENSMUSG00000000384	Tbrg4	100	76.461	ENSMLEG00000035475	TBRG4	100	76.619	Mandrillus_leucophaeus
ENSMUSG00000000384	Tbrg4	91	44.082	ENSMAMG00000011208	tbrg4	91	44.863	Mastacembelus_armatus
ENSMUSG00000000384	Tbrg4	91	44.234	ENSMZEG00005015189	tbrg4	100	42.500	Maylandia_zebra
ENSMUSG00000000384	Tbrg4	99	49.531	ENSMGAG00000002993	TBRG4	90	52.265	Meleagris_gallopavo
ENSMUSG00000000384	Tbrg4	100	88.730	ENSMAUG00000012673	Tbrg4	100	88.730	Mesocricetus_auratus
ENSMUSG00000000384	Tbrg4	100	78.041	ENSMICG00000008857	TBRG4	100	78.199	Microcebus_murinus
ENSMUSG00000000384	Tbrg4	100	88.413	ENSMOCG00000011927	Tbrg4	100	88.413	Microtus_ochrogaster
ENSMUSG00000000384	Tbrg4	100	44.252	ENSMMOG00000003259	tbrg4	100	44.252	Mola_mola
ENSMUSG00000000384	Tbrg4	100	62.085	ENSMODG00000010568	TBRG4	99	62.085	Monodelphis_domestica
ENSMUSG00000000384	Tbrg4	91	43.373	ENSMALG00000012463	tbrg4	99	41.628	Monopterus_albus
ENSMUSG00000000384	Tbrg4	100	98.254	MGP_CAROLIEiJ_G0016079	Tbrg4	100	98.254	Mus_caroli
ENSMUSG00000000384	Tbrg4	100	97.460	MGP_PahariEiJ_G0016812	Tbrg4	100	97.460	Mus_pahari
ENSMUSG00000000384	Tbrg4	100	99.683	MGP_SPRETEiJ_G0016921	Tbrg4	100	99.683	Mus_spretus
ENSMUSG00000000384	Tbrg4	100	71.674	ENSMPUG00000018185	TBRG4	97	71.674	Mustela_putorius_furo
ENSMUSG00000000384	Tbrg4	100	83.254	ENSNGAG00000008521	Tbrg4	100	83.412	Nannospalax_galili
ENSMUSG00000000384	Tbrg4	91	44.578	ENSNBRG00000014277	tbrg4	100	42.613	Neolamprologus_brichardi
ENSMUSG00000000384	Tbrg4	100	75.355	ENSNLEG00000004152	TBRG4	100	78.058	Nomascus_leucogenys
ENSMUSG00000000384	Tbrg4	100	62.222	ENSMEUG00000012908	TBRG4	100	62.222	Notamacropus_eugenii
ENSMUSG00000000384	Tbrg4	100	73.934	ENSOPRG00000001828	TBRG4	100	73.776	Ochotona_princeps
ENSMUSG00000000384	Tbrg4	100	74.250	ENSODEG00000013538	TBRG4	100	74.092	Octodon_degus
ENSMUSG00000000384	Tbrg4	91	44.923	ENSONIG00000005969	tbrg4	98	43.302	Oreochromis_niloticus
ENSMUSG00000000384	Tbrg4	100	77.567	ENSOCUG00000007618	TBRG4	100	77.409	Oryctolagus_cuniculus
ENSMUSG00000000384	Tbrg4	100	43.101	ENSORLG00000008558	tbrg4	100	43.101	Oryzias_latipes
ENSMUSG00000000384	Tbrg4	100	43.411	ENSORLG00020013119	tbrg4	100	43.411	Oryzias_latipes_hni
ENSMUSG00000000384	Tbrg4	100	43.478	ENSORLG00015019406	tbrg4	100	43.478	Oryzias_latipes_hsok
ENSMUSG00000000384	Tbrg4	100	44.323	ENSOMEG00000003748	tbrg4	100	44.012	Oryzias_melastigma
ENSMUSG00000000384	Tbrg4	100	75.829	ENSOGAG00000007301	TBRG4	100	75.829	Otolemur_garnettii
ENSMUSG00000000384	Tbrg4	100	76.145	ENSOARG00000013838	TBRG4	100	75.987	Ovis_aries
ENSMUSG00000000384	Tbrg4	100	75.513	ENSPPAG00000043164	TBRG4	100	78.058	Pan_paniscus
ENSMUSG00000000384	Tbrg4	100	72.670	ENSPPRG00000008410	TBRG4	100	72.670	Panthera_pardus
ENSMUSG00000000384	Tbrg4	100	75.513	ENSPTRG00000019159	TBRG4	100	78.058	Pan_troglodytes
ENSMUSG00000000384	Tbrg4	100	76.619	ENSPANG00000004288	TBRG4	100	76.978	Papio_anubis
ENSMUSG00000000384	Tbrg4	90	44.464	ENSPKIG00000022701	tbrg4	87	44.464	Paramormyrops_kingsleyae
ENSMUSG00000000384	Tbrg4	100	52.276	ENSPSIG00000007387	TBRG4	100	52.276	Pelodiscus_sinensis
ENSMUSG00000000384	Tbrg4	100	41.395	ENSPMGG00000002169	tbrg4	100	41.167	Periophthalmus_magnuspinnatus
ENSMUSG00000000384	Tbrg4	100	89.206	ENSPEMG00000009444	Tbrg4	100	89.206	Peromyscus_maniculatus_bairdii
ENSMUSG00000000384	Tbrg4	87	40.283	ENSPMAG00000000723	tbrg4	79	41.165	Petromyzon_marinus
ENSMUSG00000000384	Tbrg4	100	63.333	ENSPCIG00000011764	TBRG4	100	63.333	Phascolarctos_cinereus
ENSMUSG00000000384	Tbrg4	89	43.915	ENSPFOG00000017918	tbrg4	88	43.915	Poecilia_formosa
ENSMUSG00000000384	Tbrg4	89	44.092	ENSPLAG00000009771	tbrg4	88	44.092	Poecilia_latipinna
ENSMUSG00000000384	Tbrg4	89	44.268	ENSPMEG00000020268	tbrg4	88	44.268	Poecilia_mexicana
ENSMUSG00000000384	Tbrg4	89	43.684	ENSPREG00000019178	tbrg4	89	43.860	Poecilia_reticulata
ENSMUSG00000000384	Tbrg4	79	75.354	ENSPCAG00000005485	TBRG4	100	75.354	Procavia_capensis
ENSMUSG00000000384	Tbrg4	100	78.515	ENSPCOG00000026104	TBRG4	100	78.515	Propithecus_coquereli
ENSMUSG00000000384	Tbrg4	59	75.789	ENSPVAG00000007083	-	75	75.789	Pteropus_vampyrus
ENSMUSG00000000384	Tbrg4	91	44.750	ENSPNYG00000017453	tbrg4	100	42.969	Pundamilia_nyererei
ENSMUSG00000000384	Tbrg4	89	46.516	ENSPNAG00000006509	tbrg4	89	46.516	Pygocentrus_nattereri
ENSMUSG00000000384	Tbrg4	100	92.540	ENSRNOG00000052477	Tbrg4	100	92.540	Rattus_norvegicus
ENSMUSG00000000384	Tbrg4	100	76.777	ENSRBIG00000039611	TBRG4	100	76.777	Rhinopithecus_bieti
ENSMUSG00000000384	Tbrg4	100	76.777	ENSRROG00000004852	TBRG4	100	76.777	Rhinopithecus_roxellana
ENSMUSG00000000384	Tbrg4	100	75.355	ENSSBOG00000029317	TBRG4	100	77.698	Saimiri_boliviensis_boliviensis
ENSMUSG00000000384	Tbrg4	100	61.490	ENSSHAG00000006682	TBRG4	99	61.490	Sarcophilus_harrisii
ENSMUSG00000000384	Tbrg4	64	47.445	ENSSFOG00015010116	tbrg4	78	47.445	Scleropages_formosus
ENSMUSG00000000384	Tbrg4	91	42.509	ENSSMAG00000019314	tbrg4	100	40.625	Scophthalmus_maximus
ENSMUSG00000000384	Tbrg4	100	41.654	ENSSDUG00000007310	tbrg4	100	41.654	Seriola_dumerili
ENSMUSG00000000384	Tbrg4	92	43.299	ENSSLDG00000016682	tbrg4	98	41.838	Seriola_lalandi_dorsalis
ENSMUSG00000000384	Tbrg4	100	47.649	ENSSPUG00000017144	TBRG4	99	47.812	Sphenodon_punctatus
ENSMUSG00000000384	Tbrg4	92	41.513	ENSSPAG00000002511	tbrg4	92	41.246	Stegastes_partitus
ENSMUSG00000000384	Tbrg4	100	74.566	ENSSSCG00000016732	TBRG4	100	75.180	Sus_scrofa
ENSMUSG00000000384	Tbrg4	100	43.256	ENSTRUG00000012262	tbrg4	100	43.438	Takifugu_rubripes
ENSMUSG00000000384	Tbrg4	91	44.804	ENSTNIG00000018389	tbrg4	91	44.804	Tetraodon_nigroviridis
ENSMUSG00000000384	Tbrg4	100	71.406	ENSUAMG00000013066	TBRG4	100	71.406	Ursus_americanus
ENSMUSG00000000384	Tbrg4	100	71.451	ENSVVUG00000015464	TBRG4	100	71.451	Vulpes_vulpes
ENSMUSG00000000384	Tbrg4	100	54.985	ENSXETG00000023866	tbrg4	100	54.985	Xenopus_tropicalis
ENSMUSG00000000384	Tbrg4	100	41.501	ENSXCOG00000019691	tbrg4	100	41.113	Xiphophorus_couchianus
ENSMUSG00000000384	Tbrg4	100	40.712	ENSXMAG00000014438	tbrg4	100	40.312	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004672	protein kinase activity	-	IEA	Function
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005759	mitochondrial matrix	-	ISO	Component
GO:0016071	mRNA metabolic process	-	ISO	Process
GO:0044528	regulation of mitochondrial mRNA stability	-	ISO	Process
GO:0045333	cellular respiration	20869947.	ISS	Process
GO:0090615	mitochondrial mRNA processing	-	ISO	Process