EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000000420 (Gene tree)
Gene ID: 14423
Gene Symbol: Galnt1
Alias: ppGaNTase-T1
Full Name: polypeptide N-acetylgalactosaminyltransferase 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 81475
Position: chr18: 24205344-24286818
Accession: 894693
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000170191	-	798	-	-	- (aa)	-	-
ENSMUST00000000430	-	3977	-	ENSMUSP00000000430	559 (aa)	-	O08912
ENSMUST00000164998	-	980	-	ENSMUSP00000132411	142 (aa)	-	E9Q0U0
ENSMUST00000164066	-	720	-	ENSMUSP00000130238	78 (aa)	-	F6PYE1
ENSMUST00000178605	-	3796	XM_006525650	ENSMUSP00000137427	559 (aa)	XP_006525713	O08912
ENSMUST00000171583	-	678	-	ENSMUSP00000131755	62 (aa)	-	E9PVK6
ENSMUST00000169474	-	818	-	-	- (aa)	-	-
ENSMUST00000170243	-	4108	-	ENSMUSP00000132142	559 (aa)	-	O08912

Gene Model

Click here to download ENSMUSG00000000420's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu00512	Mucin type O-glycan biosynthesis	KEGG
mmu01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000000420's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004653	polypeptide N-acetylgalactosaminyltransferase activity	11278534.12407114.	IDA	Function
GO:0004653	polypeptide N-acetylgalactosaminyltransferase activity	-	ISO	Function
GO:0005576	extracellular region	-	IEA	Component
GO:0005794	Golgi apparatus	21873635.	IBA	Component
GO:0005794	Golgi apparatus	-	ISO	Component
GO:0006493	protein O-linked glycosylation	11278534.12407114.	IDA	Process
GO:0006493	protein O-linked glycosylation	-	ISO	Process
GO:0016020	membrane	-	IEA	Component
GO:0016021	integral component of membrane	-	IEA	Component
GO:0016740	transferase activity	-	IEA	Function
GO:0016757	transferase activity, transferring glycosyl groups	-	IEA	Function
GO:0018242	protein O-linked glycosylation via serine	-	ISO	Process
GO:0018243	protein O-linked glycosylation via threonine	-	ISO	Process
GO:0030145	manganese ion binding	-	ISO	Function
GO:0030246	carbohydrate binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0048471	perinuclear region of cytoplasm	-	ISO	Component