EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000000581 (Gene tree)
Gene ID
57316
Gene Symbol
C1d
Alias
1110036E10Rik|SUN-CoR
Full Name
C1D nuclear receptor co-repressor
Gene Type
protein_coding
Species
Mus_musculus
Status
putative
Strand
Plus strand
Length
11598 bases
Position
chr11:17257579-17269176
Accession
1927354
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000121134Sas10_Utp3PF04000.159e-1811
ENSMUSP00000000594Sas10_Utp3PF04000.151.4e-1711
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000000594-2981XM_006514762ENSMUSP00000000594141 (aa)XP_006514825O35473
ENSMUST00000131227-343--- (aa)--
ENSMUST00000156784-684-ENSMUSP00000121134118 (aa)-A0A0A0MQK7
ENSMUST00000130330-416--- (aa)--
ENSMUST00000135568-625--- (aa)--
Gene Model
Click here to download ENSMUSG00000000581's gene model file
Pathways
Pathway IDPathway NameSource
mmu03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000000581's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000000581C1d10092.373ENSG00000197223C1D9990.714Homo_sapiens
ENSMUSG00000000581C1d10070.339ENSAPOG00000005466c1d9565.957Acanthochromis_polyacanthus
ENSMUSG00000000581C1d10091.525ENSAMEG00000004859C1D9589.209Ailuropoda_melanoleuca
ENSMUSG00000000581C1d10069.492ENSACIG00000012684c1d8665.909Amphilophus_citrinellus
ENSMUSG00000000581C1d9769.298ENSAOCG00000020354c1d8666.667Amphiprion_ocellaris
ENSMUSG00000000581C1d9770.175ENSAPEG00000001403c1d8666.917Amphiprion_percula
ENSMUSG00000000581C1d10069.492ENSATEG00000012922c1d8866.423Anabas_testudineus
ENSMUSG00000000581C1d9480.180ENSAPLG00000009320C1D9374.074Anas_platyrhynchos
ENSMUSG00000000581C1d9482.883ENSACAG00000001337C1D10081.148Anolis_carolinensis
ENSMUSG00000000581C1d10091.525ENSANAG00000035972-9990.000Aotus_nancymaae
ENSMUSG00000000581C1d10088.136ENSANAG00000005773-9987.143Aotus_nancymaae
ENSMUSG00000000581C1d9967.521ENSACLG00000026206c1d8963.910Astatotilapia_calliptera
ENSMUSG00000000581C1d10068.644ENSAMXG00000043212c1d9863.636Astyanax_mexicanus
ENSMUSG00000000581C1d10090.678ENSBTAG00000049002C1D10088.652Bos_taurus
ENSMUSG00000000581C1d10092.373ENSCJAG00000006589C1D9290.000Callithrix_jacchus
ENSMUSG00000000581C1d9882.759ENSCJAG00000044668-9182.759Callithrix_jacchus
ENSMUSG00000000581C1d10089.831ENSCAFG00000030099C1D10087.943Canis_familiaris
ENSMUSG00000000581C1d10089.831ENSCAFG00020026997C1D10087.943Canis_lupus_dingo
ENSMUSG00000000581C1d10090.678ENSCHIG00000025729C1D10089.362Capra_hircus
ENSMUSG00000000581C1d9985.470ENSTSYG00000026573-8579.286Carlito_syrichta
ENSMUSG00000000581C1d10091.525ENSTSYG00000035739-10088.652Carlito_syrichta
ENSMUSG00000000581C1d9679.646ENSCAPG00000011523-9479.646Cavia_aperea
ENSMUSG00000000581C1d9680.531ENSCPOG00000020112-9480.531Cavia_porcellus
ENSMUSG00000000581C1d10088.136ENSCPOG00000037986-9987.857Cavia_porcellus
ENSMUSG00000000581C1d10092.373ENSCCAG00000030405-9990.714Cebus_capucinus
ENSMUSG00000000581C1d10092.373ENSCATG00000045336C1D9990.000Cercocebus_atys
ENSMUSG00000000581C1d10088.136ENSCATG00000043348-9987.143Cercocebus_atys
ENSMUSG00000000581C1d10090.678ENSCLAG00000011883C1D10088.652Chinchilla_lanigera
ENSMUSG00000000581C1d10092.373ENSCSAG00000014811C1D9990.000Chlorocebus_sabaeus
ENSMUSG00000000581C1d10091.525ENSCHOG00000006719C1D7988.652Choloepus_hoffmanni
ENSMUSG00000000581C1d9483.784ENSCPBG00000014451C1D9078.947Chrysemys_picta_bellii
ENSMUSG00000000581C1d9843.966ENSCING00000020906-6442.623Ciona_intestinalis
ENSMUSG00000000581C1d9447.748ENSCSAVG00000000150-6746.154Ciona_savignyi
ENSMUSG00000000581C1d9185.981ENSCANG00000036599-10078.049Colobus_angolensis_palliatus
ENSMUSG00000000581C1d10091.525ENSCANG00000035564C1D9989.286Colobus_angolensis_palliatus
ENSMUSG00000000581C1d10098.305ENSCGRG00001023376C1d10096.454Cricetulus_griseus_chok1gshd
ENSMUSG00000000581C1d10098.305ENSCGRG00000010245C1d10096.454Cricetulus_griseus_crigri
ENSMUSG00000000581C1d10063.559ENSCSEG00000000587c1d9161.538Cynoglossus_semilaevis
ENSMUSG00000000581C1d9666.372ENSCVAG00000004603c1d8763.359Cyprinodon_variegatus
ENSMUSG00000000581C1d10065.254ENSDARG00000021112c1d9660.563Danio_rerio
ENSMUSG00000000581C1d10081.356ENSDNOG00000046068-10080.142Dasypus_novemcinctus
ENSMUSG00000000581C1d10089.831ENSDORG00000003300C1d10087.943Dipodomys_ordii
ENSMUSG00000000581C1d6790.426ENSETEG00000014857C1D9990.426Echinops_telfairi
ENSMUSG00000000581C1d9259.633ENSEBUG00000006874c1d7460.684Eptatretus_burgeri
ENSMUSG00000000581C1d10090.678ENSEASG00005007307C1D9288.652Equus_asinus_asinus
ENSMUSG00000000581C1d10090.678ENSECAG00000002187C1D9989.130Equus_caballus
ENSMUSG00000000581C1d10067.797ENSELUG00000014823c1d8668.254Esox_lucius
ENSMUSG00000000581C1d10091.525ENSFCAG00000028933C1D10089.362Felis_catus
ENSMUSG00000000581C1d9483.784ENSFALG00000013640C1D8179.699Ficedula_albicollis
ENSMUSG00000000581C1d10091.525ENSFDAG00000010462-10088.652Fukomys_damarensis
ENSMUSG00000000581C1d10073.239ENSFDAG00000014175-10073.239Fukomys_damarensis
ENSMUSG00000000581C1d10067.797ENSFHEG00000010545c1d9266.165Fundulus_heteroclitus
ENSMUSG00000000581C1d9467.568ENSGMOG00000013911-9365.812Gadus_morhua
ENSMUSG00000000581C1d9879.487ENSGALG00000008765C1D9774.820Gallus_gallus
ENSMUSG00000000581C1d9469.369ENSGAFG00000012578c1d8365.385Gambusia_affinis
ENSMUSG00000000581C1d10064.407ENSGACG00000011981c1d10062.500Gasterosteus_aculeatus
ENSMUSG00000000581C1d9481.982ENSGAGG00000013383C1D9076.692Gopherus_agassizii
ENSMUSG00000000581C1d10084.746ENSGGOG00000025808-8082.143Gorilla_gorilla
ENSMUSG00000000581C1d10092.373ENSGGOG00000025982-7890.071Gorilla_gorilla
ENSMUSG00000000581C1d10089.831ENSGGOG00000022296-9988.571Gorilla_gorilla
ENSMUSG00000000581C1d9469.369ENSHBUG00000018531c1d7665.354Haplochromis_burtoni
ENSMUSG00000000581C1d10089.831ENSHGLG00000012332-9986.429Heterocephalus_glaber_female
ENSMUSG00000000581C1d10080.508ENSHGLG00000021219-9877.536Heterocephalus_glaber_female
ENSMUSG00000000581C1d10081.356ENSHGLG00100019951-9878.261Heterocephalus_glaber_male
ENSMUSG00000000581C1d10090.678ENSHGLG00100000221-10086.525Heterocephalus_glaber_male
ENSMUSG00000000581C1d9465.766ENSHCOG00000014589c1d8963.359Hippocampus_comes
ENSMUSG00000000581C1d9465.766ENSHCOG00000014568C1D8963.359Hippocampus_comes
ENSMUSG00000000581C1d10062.712ENSIPUG00000018661c1d8762.698Ictalurus_punctatus
ENSMUSG00000000581C1d10091.525ENSSTOG00000012346C1D10088.652Ictidomys_tridecemlineatus
ENSMUSG00000000581C1d10080.508ENSJJAG00000005044-10078.261Jaculus_jaculus
ENSMUSG00000000581C1d10074.576ENSJJAG00000016086-10072.464Jaculus_jaculus
ENSMUSG00000000581C1d10082.203ENSJJAG00000009540-10079.710Jaculus_jaculus
ENSMUSG00000000581C1d9985.470ENSJJAG00000023186-9980.000Jaculus_jaculus
ENSMUSG00000000581C1d10069.492ENSKMAG00000015077c1d9361.644Kryptolebias_marmoratus
ENSMUSG00000000581C1d10066.102ENSLBEG00000008351c1d9161.702Labrus_bergylta
ENSMUSG00000000581C1d9480.180ENSLACG00000007516C1D8179.339Latimeria_chalumnae
ENSMUSG00000000581C1d10071.429ENSLOCG00000016024c1d9864.583Lepisosteus_oculatus
ENSMUSG00000000581C1d10088.983ENSLAFG00000002083C1D10087.234Loxodonta_africana
ENSMUSG00000000581C1d10092.373ENSMFAG00000034261C1D9990.000Macaca_fascicularis
ENSMUSG00000000581C1d10090.678ENSMFAG00000028681-9988.571Macaca_fascicularis
ENSMUSG00000000581C1d10087.288ENSMFAG00000034034-9986.429Macaca_fascicularis
ENSMUSG00000000581C1d10086.441ENSMMUG00000043184-9985.714Macaca_mulatta
ENSMUSG00000000581C1d10092.373ENSMMUG00000041557C1D9989.855Macaca_mulatta
ENSMUSG00000000581C1d10090.678ENSMMUG00000017209-9987.857Macaca_mulatta
ENSMUSG00000000581C1d10092.373ENSMNEG00000040612C1D9990.000Macaca_nemestrina
ENSMUSG00000000581C1d10086.441ENSMNEG00000020626-9985.714Macaca_nemestrina
ENSMUSG00000000581C1d10092.373ENSMLEG00000027619C1D9990.000Mandrillus_leucophaeus
ENSMUSG00000000581C1d10088.136ENSMLEG00000028412-9987.143Mandrillus_leucophaeus
ENSMUSG00000000581C1d10067.797ENSMAMG00000022156c1d9063.309Mastacembelus_armatus
ENSMUSG00000000581C1d9469.369ENSMZEG00005027343c1d8765.354Maylandia_zebra
ENSMUSG00000000581C1d10077.966ENSMGAG00000004517C1D9972.143Meleagris_gallopavo
ENSMUSG00000000581C1d10098.305ENSMAUG00000008974C1d10095.745Mesocricetus_auratus
ENSMUSG00000000581C1d10089.831ENSMICG00000032141C1D10087.943Microcebus_murinus
ENSMUSG00000000581C1d10097.458ENSMOCG00000010860C1d10095.745Microtus_ochrogaster
ENSMUSG00000000581C1d10067.797ENSMMOG00000007332c1d8864.286Mola_mola
ENSMUSG00000000581C1d10082.353ENSMODG00000003561C1D9978.014Monodelphis_domestica
ENSMUSG00000000581C1d10066.949ENSMALG00000020864c1d10061.314Monopterus_albus
ENSMUSG00000000581C1d100100.000MGP_CAROLIEiJ_G0016110C1d100100.000Mus_caroli
ENSMUSG00000000581C1d10099.153MGP_PahariEiJ_G0016781C1d10099.153Mus_pahari
ENSMUSG00000000581C1d100100.000MGP_SPRETEiJ_G0016952C1d100100.000Mus_spretus
ENSMUSG00000000581C1d10092.373ENSMPUG00000006224C1D10090.071Mustela_putorius_furo
ENSMUSG00000000581C1d10091.525ENSMLUG00000010791-9989.286Myotis_lucifugus
ENSMUSG00000000581C1d10087.288ENSMLUG00000029990-9985.714Myotis_lucifugus
ENSMUSG00000000581C1d10088.983ENSMLUG00000024947-9987.143Myotis_lucifugus
ENSMUSG00000000581C1d10094.068ENSNGAG00000011872-10090.071Nannospalax_galili
ENSMUSG00000000581C1d8790.291ENSNGAG00000012482-10084.921Nannospalax_galili
ENSMUSG00000000581C1d10088.983ENSNGAG00000016675-10083.688Nannospalax_galili
ENSMUSG00000000581C1d10064.228ENSNBRG00000010704c1d8764.567Neolamprologus_brichardi
ENSMUSG00000000581C1d10090.678ENSNLEG00000032919-7888.571Nomascus_leucogenys
ENSMUSG00000000581C1d10089.831ENSOPRG00000009586C1D10086.525Ochotona_princeps
ENSMUSG00000000581C1d10090.678ENSODEG00000018885-9988.406Octodon_degus
ENSMUSG00000000581C1d10091.525ENSODEG00000011242-9988.571Octodon_degus
ENSMUSG00000000581C1d10082.203ENSODEG00000018525-10077.305Octodon_degus
ENSMUSG00000000581C1d10068.644ENSONIG00000001233c1d8964.925Oreochromis_niloticus
ENSMUSG00000000581C1d7593.182ENSOANG00000008385C1D9985.455Ornithorhynchus_anatinus
ENSMUSG00000000581C1d10089.831ENSOCUG00000009771-10087.234Oryctolagus_cuniculus
ENSMUSG00000000581C1d10089.831ENSOCUG00000025587-10087.234Oryctolagus_cuniculus
ENSMUSG00000000581C1d10069.492ENSORLG00000021968c1d8366.667Oryzias_latipes
ENSMUSG00000000581C1d10069.492ENSORLG00020000507c1d8466.667Oryzias_latipes_hni
ENSMUSG00000000581C1d9471.171ENSORLG00015004594c1d8068.000Oryzias_latipes_hsok
ENSMUSG00000000581C1d10069.492ENSOMEG00000004672c1d8566.667Oryzias_melastigma
ENSMUSG00000000581C1d10089.831ENSOGAG00000027934-10087.234Otolemur_garnettii
ENSMUSG00000000581C1d10090.678ENSOARG00000019931C1D9989.362Ovis_aries
ENSMUSG00000000581C1d10092.373ENSPPAG00000037847-9990.714Pan_paniscus
ENSMUSG00000000581C1d10084.746ENSPPAG00000040091-8082.857Pan_paniscus
ENSMUSG00000000581C1d10060.284ENSPPRG00000022830-10060.284Panthera_pardus
ENSMUSG00000000581C1d10090.678ENSPPRG00000017045-10088.652Panthera_pardus
ENSMUSG00000000581C1d10091.525ENSPTIG00000009414C1D10089.362Panthera_tigris_altaica
ENSMUSG00000000581C1d10092.373ENSPTRG00000023558C1D9990.714Pan_troglodytes
ENSMUSG00000000581C1d10092.373ENSPANG00000002886C1D7890.000Papio_anubis
ENSMUSG00000000581C1d10087.288ENSPANG00000000501-9986.429Papio_anubis
ENSMUSG00000000581C1d10065.546ENSPKIG00000004877c1d9164.444Paramormyrops_kingsleyae
ENSMUSG00000000581C1d9484.685ENSPSIG00000010015C1D9278.947Pelodiscus_sinensis
ENSMUSG00000000581C1d10065.254ENSPMGG00000009326c1d8562.879Periophthalmus_magnuspinnatus
ENSMUSG00000000581C1d10076.271ENSPCIG00000006831-9772.662Phascolarctos_cinereus
ENSMUSG00000000581C1d10081.513ENSPCIG00000018629-9977.305Phascolarctos_cinereus
ENSMUSG00000000581C1d10068.644ENSPFOG00000003686c1d8865.441Poecilia_formosa
ENSMUSG00000000581C1d10068.644ENSPLAG00000000228c1d9665.441Poecilia_latipinna
ENSMUSG00000000581C1d10068.644ENSPMEG00000023213c1d8865.441Poecilia_mexicana
ENSMUSG00000000581C1d10069.492ENSPREG00000000742c1d9864.748Poecilia_reticulata
ENSMUSG00000000581C1d10083.898ENSPPYG00000002294-9982.857Pongo_abelii
ENSMUSG00000000581C1d10092.373ENSPPYG00000012354C1D7790.714Pongo_abelii
ENSMUSG00000000581C1d10077.966ENSPCAG00000010088C1D7976.596Procavia_capensis
ENSMUSG00000000581C1d10089.831ENSPCOG00000016112C1D10087.943Propithecus_coquereli
ENSMUSG00000000581C1d10090.678ENSPVAG00000012692C1D7989.362Pteropus_vampyrus
ENSMUSG00000000581C1d9469.369ENSPNYG00000008789c1d8765.354Pundamilia_nyererei
ENSMUSG00000000581C1d10070.339ENSPNAG00000004219c1d9863.636Pygocentrus_nattereri
ENSMUSG00000000581C1d10098.305ENSRNOG00000005982C1d10097.163Rattus_norvegicus
ENSMUSG00000000581C1d10087.288ENSRBIG00000026211-9985.714Rhinopithecus_bieti
ENSMUSG00000000581C1d10092.373ENSRROG00000029013C1D9990.000Rhinopithecus_roxellana
ENSMUSG00000000581C1d10088.136ENSRROG00000005944-9986.429Rhinopithecus_roxellana
ENSMUSG00000000581C1d10092.373ENSSBOG00000025275C1D9990.714Saimiri_boliviensis_boliviensis
ENSMUSG00000000581C1d10081.513ENSSHAG00000008352C1D6877.305Sarcophilus_harrisii
ENSMUSG00000000581C1d10068.908ENSSFOG00015010861c1d8968.800Scleropages_formosus
ENSMUSG00000000581C1d10065.254ENSSMAG00000019230c1d8662.687Scophthalmus_maximus
ENSMUSG00000000581C1d10068.644ENSSDUG00000020213c1d8565.909Seriola_dumerili
ENSMUSG00000000581C1d10068.644ENSSLDG00000017371c1d9063.309Seriola_lalandi_dorsalis
ENSMUSG00000000581C1d9678.761ENSSPUG00000006525C1D9274.074Sphenodon_punctatus
ENSMUSG00000000581C1d10071.186ENSSPAG00000008574c1d9065.468Stegastes_partitus
ENSMUSG00000000581C1d9772.807ENSSSCG00000035701-10070.833Sus_scrofa
ENSMUSG00000000581C1d10091.525ENSSSCG00000039331-10089.362Sus_scrofa
ENSMUSG00000000581C1d9484.685ENSTGUG00000002367C1D9478.676Taeniopygia_guttata
ENSMUSG00000000581C1d9566.964ENSTRUG00000012245c1d8361.594Takifugu_rubripes
ENSMUSG00000000581C1d10065.254ENSTNIG00000009827c1d9561.429Tetraodon_nigroviridis
ENSMUSG00000000581C1d10090.678ENSTBEG00000009797C1D10086.525Tupaia_belangeri
ENSMUSG00000000581C1d10090.678ENSTTRG00000013982C1D8088.571Tursiops_truncatus
ENSMUSG00000000581C1d10080.000ENSUAMG00000025246C1D10077.083Ursus_americanus
ENSMUSG00000000581C1d10091.525ENSUMAG00000021118-10089.362Ursus_maritimus
ENSMUSG00000000581C1d8670.192ENSUMAG00000006451-9169.298Ursus_maritimus
ENSMUSG00000000581C1d10090.678ENSVPAG00000012080C1D7988.652Vicugna_pacos
ENSMUSG00000000581C1d10089.831ENSVVUG00000027629C1D8887.234Vulpes_vulpes
ENSMUSG00000000581C1d10073.950ENSXETG00000025934c1d9968.531Xenopus_tropicalis
ENSMUSG00000000581C1d10067.797ENSXCOG00000013813c1d8864.706Xiphophorus_couchianus
ENSMUSG00000000581C1d10067.797ENSXMAG00000022273c1d8863.971Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000460maturation of 5.8S rRNA-ISOProcess
GO:0003677DNA binding9469821.IDAFunction
GO:0003714transcription corepressor activity9405624.IDAFunction
GO:0003723RNA binding-ISOFunction
GO:0005515protein binding9405624.IPIFunction
GO:0005634nucleus-ISOComponent
GO:0005730nucleolus-ISOComponent
GO:0005737cytoplasm-IEAComponent
GO:0006364rRNA processing-IEAProcess
GO:0006915apoptotic process-IEAProcess
GO:0016922nuclear receptor binding9405624.IDAFunction
GO:0017053transcriptional repressor complex9405624.IDAComponent
GO:0045892negative regulation of transcription, DNA-templated9405624.IDAProcess

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