EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000000711 (Gene tree)
Gene ID
19344
Gene Symbol
Rab5b
Alias
C030027M18Rik
Full Name
RAB5B%2C member RAS oncogene family
Gene Type
protein_coding
Species
Mus_musculus
Status
putative
Strand
Minus strand
Length
19090 bases
Position
chr10:128677175-128696264
Accession
105938
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000000727MMR_HSR1PF01926.230.0003411
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000000727-3180XM_006513384ENSMUSP00000000727215 (aa)XP_006513447P61021
ENSMUST00000220593-1629--- (aa)--
Gene Model
Click here to download ENSMUSG00000000711's gene model file
Pathways
Pathway IDPathway NameSource
mmu04014Ras signaling pathwayKEGG
mmu04144EndocytosisKEGG
mmu04145PhagosomeKEGG
mmu04962Vasopressin-regulated water reabsorptionKEGG
mmu05146AmoebiasisKEGG
mmu05152TuberculosisKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000000711's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000000711Rab5b8236.932ENSMUSG00000021062Rab158336.932
ENSMUSG00000000711Rab5b9035.323ENSMUSG00000043463Rab9b9735.323
ENSMUSG00000000711Rab5b7545.963ENSMUSG00000008601Rab257645.963
ENSMUSG00000000711Rab5b7835.882ENSMUSG00000031202Rab39b8035.882
ENSMUSG00000000711Rab5b7540.373ENSMUSG00000027935Rab138040.373
ENSMUSG00000000711Rab5b7745.783ENSMUSG00000032549Rab6b8045.783
ENSMUSG00000000711Rab5b7437.195ENSMUSG00000022621Rabl27237.195
ENSMUSG00000000711Rab5b10081.860ENSMUSG00000017831Rab5a10081.860
ENSMUSG00000000711Rab5b9043.367ENSMUSG00000020149Rab1a9643.367
ENSMUSG00000000711Rab5b7544.720ENSMUSG00000026878Rab147544.720
ENSMUSG00000000711Rab5b9786.124ENSMUSG00000019173Rab5c9786.124
ENSMUSG00000000711Rab5b8430.220ENSMUSG00000027852Nras9933.333
ENSMUSG00000000711Rab5b7437.500ENSMUSG00000004768Rab236737.500
ENSMUSG00000000711Rab5b7732.335ENSMUSG00000030265Kras8832.335
ENSMUSG00000000711Rab5b6230.986ENSMUSG00000026426Arl8a7330.986
ENSMUSG00000000711Rab5b8133.143ENSMUSG00000064147Rab446733.143
ENSMUSG00000000711Rab5b9147.959ENSMUSG00000056515Rab319847.959
ENSMUSG00000000711Rab5b5530.159ENSMUSG00000047446Arl4a6030.159
ENSMUSG00000000711Rab5b9137.949ENSMUSG00000047187Rab2a7643.478
ENSMUSG00000000711Rab5b8232.787ENSMUSG00000025499Hras9632.787
ENSMUSG00000000711Rab5b8337.705ENSMUSG00000031104Rab33a7737.705
ENSMUSG00000000711Rab5b7547.205ENSMUSG00000004771Rab11a8848.889
ENSMUSG00000000711Rab5b8535.326ENSMUSG00000023460Rab127635.326
ENSMUSG00000000711Rab5b6230.986ENSMUSG00000030105Arl8b7330.986
ENSMUSG00000000711Rab5b9038.462ENSMUSG00000073639Rab189338.462
ENSMUSG00000000711Rab5b7745.181ENSMUSG00000030704Rab6a8045.181
ENSMUSG00000000711Rab5b9335.294ENSMUSG00000079316Rab99935.294
ENSMUSG00000000711Rab5b9043.627ENSMUSG00000077450Rab11b8948.872
ENSMUSG00000000711Rab5b7842.857ENSMUSG00000030643Rab309246.939
ENSMUSG00000000711Rab5b7335.000ENSMUSG00000020175Rab366035.000
ENSMUSG00000000711Rab5b8245.198ENSMUSG00000024870Rab1b8745.198
ENSMUSG00000000711Rab5b8033.333ENSMUSG00000083649Rasl2-97633.333
ENSMUSG00000000711Rab5b8640.761ENSMUSG00000022159Rab2b8540.761
ENSMUSG00000000711Rab5b8233.333ENSMUSG00000028945Rheb9333.333
ENSMUSG00000000711Rab5b8239.344ENSMUSG00000027739Rab33b7939.130
ENSMUSG00000000711Rab5b9047.938ENSMUSG00000027519Rab22a9847.938
ENSMUSG00000000711Rab5b9441.827ENSMUSG00000020732Rab379341.827
ENSMUSG00000000711Rab5b7842.442ENSMUSG00000079477Rab79047.727
ENSMUSG00000000711Rab5b9037.949ENSMUSG00000029518Rab359637.949
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000000711Rab5b100100.000ENSG00000111540RAB5B100100.000Homo_sapiens
ENSMUSG00000000711Rab5b10098.618ENSAMEG00000003196RAB5B10098.618Ailuropoda_melanoleuca
ENSMUSG00000000711Rab5b10096.279ENSACAG00000005380RAB5B10096.279Anolis_carolinensis
ENSMUSG00000000711Rab5b100100.000ENSANAG00000033215RAB5B95100.000Aotus_nancymaae
ENSMUSG00000000711Rab5b10099.535ENSBTAG00000014129RAB5B10099.535Bos_taurus
ENSMUSG00000000711Rab5b100100.000ENSCJAG00000041780RAB5B95100.000Callithrix_jacchus
ENSMUSG00000000711Rab5b100100.000ENSCAFG00000000087RAB5B100100.000Canis_familiaris
ENSMUSG00000000711Rab5b100100.000ENSCAFG00020026094RAB5B100100.000Canis_lupus_dingo
ENSMUSG00000000711Rab5b97100.000ENSCHIG00000010333RAB5B96100.000Capra_hircus
ENSMUSG00000000711Rab5b10099.535ENSTSYG00000009576RAB5B10099.535Carlito_syrichta
ENSMUSG00000000711Rab5b100100.000ENSCPOG00000034818RAB5B100100.000Cavia_porcellus
ENSMUSG00000000711Rab5b10099.070ENSCCAG00000019480RAB5B10099.070Cebus_capucinus
ENSMUSG00000000711Rab5b8399.441ENSCATG00000034978RAB5B9899.441Cercocebus_atys
ENSMUSG00000000711Rab5b10099.070ENSCSAG00000005277RAB5B10099.070Chlorocebus_sabaeus
ENSMUSG00000000711Rab5b10096.279ENSCPBG00000012712RAB5B10096.279Chrysemys_picta_bellii
ENSMUSG00000000711Rab5b10099.535ENSCGRG00001000428Rab5b10099.535Cricetulus_griseus_chok1gshd
ENSMUSG00000000711Rab5b10099.535ENSCGRG00000009508-10099.535Cricetulus_griseus_crigri
ENSMUSG00000000711Rab5b100100.000ENSDORG00000025063Rab5b100100.000Dipodomys_ordii
ENSMUSG00000000711Rab5b10099.535ENSECAG00000023306RAB5B10099.535Equus_caballus
ENSMUSG00000000711Rab5b10099.070ENSEEUG00000006745RAB5B10099.070Erinaceus_europaeus
ENSMUSG00000000711Rab5b100100.000ENSFDAG00000008326RAB5B100100.000Fukomys_damarensis
ENSMUSG00000000711Rab5b10099.070ENSHGLG00000005995RAB5B10099.070Heterocephalus_glaber_female
ENSMUSG00000000711Rab5b10099.070ENSHGLG00100012955RAB5B10099.070Heterocephalus_glaber_male
ENSMUSG00000000711Rab5b10098.605ENSSTOG00000010536RAB5B10098.605Ictidomys_tridecemlineatus
ENSMUSG00000000711Rab5b10099.535ENSJJAG00000019506Rab5b10099.535Jaculus_jaculus
ENSMUSG00000000711Rab5b10099.078ENSLAFG00000018009RAB5B9599.078Loxodonta_africana
ENSMUSG00000000711Rab5b10099.070ENSMFAG00000029992RAB5B10099.070Macaca_fascicularis
ENSMUSG00000000711Rab5b10099.070ENSMMUG00000031853RAB5B10099.070Macaca_mulatta
ENSMUSG00000000711Rab5b10099.070ENSMNEG00000005338RAB5B10099.070Macaca_nemestrina
ENSMUSG00000000711Rab5b10099.070ENSMLEG00000034462RAB5B10099.070Mandrillus_leucophaeus
ENSMUSG00000000711Rab5b100100.000ENSMAUG00000011613Rab5b100100.000Mesocricetus_auratus
ENSMUSG00000000711Rab5b10099.535ENSMICG00000011086RAB5B10099.535Microcebus_murinus
ENSMUSG00000000711Rab5b100100.000MGP_PahariEiJ_G0031135Rab5b100100.000Mus_pahari
ENSMUSG00000000711Rab5b10099.535MGP_SPRETEiJ_G0016774Rab5b10099.535Mus_spretus
ENSMUSG00000000711Rab5b9998.611ENSMPUG00000000946RAB5B8998.611Mustela_putorius_furo
ENSMUSG00000000711Rab5b100100.000ENSNLEG00000017570-100100.000Nomascus_leucogenys
ENSMUSG00000000711Rab5b100100.000ENSOPRG00000007883RAB5B100100.000Ochotona_princeps
ENSMUSG00000000711Rab5b10099.535ENSODEG00000003860RAB5B10099.535Octodon_degus
ENSMUSG00000000711Rab5b100100.000ENSOCUG00000013895RAB5B95100.000Oryctolagus_cuniculus
ENSMUSG00000000711Rab5b100100.000ENSOARG00000010651RAB5B95100.000Ovis_aries
ENSMUSG00000000711Rab5b100100.000ENSPPAG00000035431RAB5B100100.000Pan_paniscus
ENSMUSG00000000711Rab5b100100.000ENSPTRG00000005071RAB5B9799.522Pan_troglodytes
ENSMUSG00000000711Rab5b9998.131ENSPANG00000021075RAB5B9798.131Papio_anubis
ENSMUSG00000000711Rab5b100100.000ENSPCOG00000016461RAB5B100100.000Propithecus_coquereli
ENSMUSG00000000711Rab5b10099.070ENSRNOG00000006130Rab5b10099.070Rattus_norvegicus
ENSMUSG00000000711Rab5b10099.070ENSRBIG00000013165RAB5B10099.070Rhinopithecus_bieti
ENSMUSG00000000711Rab5b10099.070ENSRROG00000037973RAB5B10099.070Rhinopithecus_roxellana
ENSMUSG00000000711Rab5b10083.256ENSSBOG00000035419RAB5B10083.256Saimiri_boliviensis_boliviensis
ENSMUSG00000000711Rab5b10098.605ENSSHAG00000007727RAB5B10098.605Sarcophilus_harrisii
ENSMUSG00000000711Rab5b100100.000ENSSARG00000006237RAB5B100100.000Sorex_araneus
ENSMUSG00000000711Rab5b10096.279ENSSPUG00000014873RAB5B10096.279Sphenodon_punctatus
ENSMUSG00000000711Rab5b100100.000ENSTTRG00000015001RAB5B100100.000Tursiops_truncatus
ENSMUSG00000000711Rab5b10099.535ENSUAMG00000014651RAB5B10099.535Ursus_americanus
ENSMUSG00000000711Rab5b10099.535ENSUMAG00000016263RAB5B10099.535Ursus_maritimus
ENSMUSG00000000711Rab5b68100.000ENSVVUG00000022054RAB5B81100.000Vulpes_vulpes
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000166nucleotide binding-IEAFunction
GO:0003924GTPase activity21873635.IBAFunction
GO:0003924GTPase activity-ISOFunction
GO:0003924GTPase activity7789520.TASFunction
GO:0005515protein binding18445495.IPIFunction
GO:0005525GTP binding-IEAFunction
GO:0005768endosome21873635.IBAComponent
GO:0005768endosome-ISOComponent
GO:0005769early endosome21873635.IBAComponent
GO:0005886plasma membrane21873635.IBAComponent
GO:0006886intracellular protein transport21873635.IBAProcess
GO:0006897endocytosis21873635.IBAProcess
GO:0007032endosome organization7789520.IDAProcess
GO:0015031protein transport-IEAProcess
GO:0016020membrane-IEAComponent
GO:0019003GDP binding-ISOFunction
GO:0019882antigen processing and presentation-ISOProcess
GO:0030100regulation of endocytosis21873635.IBAProcess
GO:0030100regulation of endocytosis7789520.IDAProcess
GO:0030139endocytic vesicle21873635.IBAComponent
GO:0030139endocytic vesicle7789520.IDAComponent
GO:0030742GTP-dependent protein binding-ISOFunction
GO:0032482Rab protein signal transduction21873635.IBAProcess
GO:0043231intracellular membrane-bounded organelle-ISOComponent
GO:0048227plasma membrane to endosome transport-ISOProcess
GO:0070062extracellular exosome-ISOComponent
GO:0098993anchored component of synaptic vesicle membrane-ISOComponent

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