EuRBPDB

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  • Description
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000001017 (Gene tree)
Gene ID
66511
Gene Symbol
Chtop
Alias
2500003M10Rik|Fop|friend of Prmt1
Full Name
chromatin target of PRMT1
Gene Type
protein_coding
Species
Mus_musculus
Status
putative
Strand
Minus strand
Length
10543
Position
chr3: 90498956-90509498
Accession
1913761
RBP type
non-canonical RBP
Summary
-
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
25993413Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle ProgressionIC & MEF2015Boucas JDOI: 10.1371/journal.pone.0125745
27281784Identification of RNA binding Proteins in Macrophages by Interactome CaptureIC & RAW264.72016 Jun 8Liepelt ADOI: 10.1074/mcp.M115.056564
23912277The RNA binding protein repertoire of embryonic stem cellsIC & mESC2013 Aug 4Kwon SCDOI: 10.1038/nsmb.2638
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseIC & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseRBDmap & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000107342-2411-ENSMUSP00000102965177 (aa)-Q9CY57
ENSMUST00000107343-3118-ENSMUSP00000102966178 (aa)-Q9CY57
ENSMUST00000107346-1321-ENSMUSP00000102969203 (aa)-E9PW20
ENSMUST00000107344-2972-ENSMUSP00000102967224 (aa)-Q9CY57
ENSMUST00000146740-889-ENSMUSP00000116945195 (aa)-D3Z7T7
ENSMUST00000049937-2012-ENSMUSP00000061800249 (aa)-Q9CY57
ENSMUST00000076639-1842-ENSMUSP00000075936202 (aa)-Q9CY57
ENSMUST00000131868-637-ENSMUSP00000123448123 (aa)-D3YZA1
ENSMUST00000001043-3257-ENSMUSP00000001043224 (aa)-Q9CY57
Gene Model
Click here to download ENSMUSG00000001017's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000001017's network
Orthologs identified by RBPome
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000001017Chtop10099.197ENSG00000160679CHTOP10099.197Homo_sapiens
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003723RNA binding-IEAFunction
GO:0005515protein binding19858291.IPIFunction
GO:0005634nucleus-IEAComponent

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