EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000001305 (Gene tree)
Gene ID: 67223
Gene Symbol: Rrp15
Alias: 2810430M08Rik|5430437H21Rik
Full Name: ribosomal RNA processing 15 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 28381 bases
Position: chr1:186720978-186749358
Accession: 1914473
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000001339	Rrp15p	PF07890.12	4.7e-31	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000162336	-	3092	-	-	- (aa)	-	-
ENSMUST00000001339	-	1321	-	ENSMUSP00000001339	281 (aa)	-	Q9CYX7

Gene Model

Click here to download ENSMUSG00000001305's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000001305's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000001305	Rrp15	99	73.759	ENSG00000067533	RRP15	99	73.404	Homo_sapiens
ENSMUSG00000001305	Rrp15	67	61.053	ENSAPOG00000023503	rrp15	84	55.507	Acanthochromis_polyacanthus
ENSMUSG00000001305	Rrp15	97	76.344	ENSAMEG00000010908	RRP15	98	76.344	Ailuropoda_melanoleuca
ENSMUSG00000001305	Rrp15	74	56.039	ENSACIG00000009843	rrp15	83	56.039	Amphilophus_citrinellus
ENSMUSG00000001305	Rrp15	88	52.988	ENSAOCG00000020692	rrp15	88	57.872	Amphiprion_ocellaris
ENSMUSG00000001305	Rrp15	88	52.590	ENSAPEG00000005083	rrp15	88	57.447	Amphiprion_percula
ENSMUSG00000001305	Rrp15	88	50.988	ENSATEG00000001249	rrp15	86	53.275	Anabas_testudineus
ENSMUSG00000001305	Rrp15	75	66.047	ENSAPLG00000005787	RRP15	87	66.047	Anas_platyrhynchos
ENSMUSG00000001305	Rrp15	71	70.000	ENSACAG00000014906	RRP15	82	68.095	Anolis_carolinensis
ENSMUSG00000001305	Rrp15	99	62.633	ENSANAG00000021508	-	98	62.278	Aotus_nancymaae
ENSMUSG00000001305	Rrp15	99	56.491	ENSANAG00000037326	-	98	56.140	Aotus_nancymaae
ENSMUSG00000001305	Rrp15	99	71.631	ENSANAG00000019880	-	99	71.277	Aotus_nancymaae
ENSMUSG00000001305	Rrp15	99	67.133	ENSANAG00000024280	-	99	66.434	Aotus_nancymaae
ENSMUSG00000001305	Rrp15	88	60.784	ENSANAG00000038078	-	89	61.200	Aotus_nancymaae
ENSMUSG00000001305	Rrp15	68	61.579	ENSACLG00000005886	rrp15	96	53.879	Astatotilapia_calliptera
ENSMUSG00000001305	Rrp15	83	51.883	ENSAMXG00000020320	rrp15	86	52.083	Astyanax_mexicanus
ENSMUSG00000001305	Rrp15	98	74.286	ENSBTAG00000009838	RRP15	97	74.286	Bos_taurus
ENSMUSG00000001305	Rrp15	99	70.567	ENSCJAG00000012916	RRP15	99	70.567	Callithrix_jacchus
ENSMUSG00000001305	Rrp15	97	74.558	ENSCAFG00000010835	RRP15	98	74.558	Canis_familiaris
ENSMUSG00000001305	Rrp15	97	74.558	ENSCAFG00020004175	RRP15	98	74.558	Canis_lupus_dingo
ENSMUSG00000001305	Rrp15	97	74.820	ENSCHIG00000013758	RRP15	97	74.820	Capra_hircus
ENSMUSG00000001305	Rrp15	82	75.641	ENSTSYG00000033303	-	90	75.641	Carlito_syrichta
ENSMUSG00000001305	Rrp15	95	70.956	ENSTSYG00000030323	-	98	70.588	Carlito_syrichta
ENSMUSG00000001305	Rrp15	75	70.183	ENSCAPG00000013210	RRP15	96	70.183	Cavia_aperea
ENSMUSG00000001305	Rrp15	95	71.642	ENSCPOG00000007644	RRP15	95	73.134	Cavia_porcellus
ENSMUSG00000001305	Rrp15	99	70.922	ENSCCAG00000010376	-	99	70.922	Cebus_capucinus
ENSMUSG00000001305	Rrp15	99	67.483	ENSCCAG00000033534	-	99	67.133	Cebus_capucinus
ENSMUSG00000001305	Rrp15	99	61.922	ENSCCAG00000024779	-	91	61.922	Cebus_capucinus
ENSMUSG00000001305	Rrp15	99	72.632	ENSCATG00000021235	RRP15	99	72.632	Cercocebus_atys
ENSMUSG00000001305	Rrp15	92	71.154	ENSCLAG00000008564	RRP15	82	67.986	Chinchilla_lanigera
ENSMUSG00000001305	Rrp15	89	73.152	ENSCSAG00000015713	RRP15	99	71.579	Chlorocebus_sabaeus
ENSMUSG00000001305	Rrp15	83	78.390	ENSCHOG00000000174	RRP15	100	78.390	Choloepus_hoffmanni
ENSMUSG00000001305	Rrp15	75	69.340	ENSCPBG00000012947	RRP15	80	69.340	Chrysemys_picta_bellii
ENSMUSG00000001305	Rrp15	64	33.937	ENSCING00000018368	-	90	34.389	Ciona_intestinalis
ENSMUSG00000001305	Rrp15	99	72.695	ENSCANG00000029783	RRP15	99	72.340	Colobus_angolensis_palliatus
ENSMUSG00000001305	Rrp15	99	83.571	ENSCGRG00001023815	Rrp15	99	83.571	Cricetulus_griseus_chok1gshd
ENSMUSG00000001305	Rrp15	99	83.571	ENSCGRG00000012581	Rrp15	99	83.571	Cricetulus_griseus_crigri
ENSMUSG00000001305	Rrp15	68	59.278	ENSCSEG00000010675	rrp15	85	55.217	Cynoglossus_semilaevis
ENSMUSG00000001305	Rrp15	80	50.442	ENSCVAG00000009850	rrp15	86	51.092	Cyprinodon_variegatus
ENSMUSG00000001305	Rrp15	80	55.752	ENSDARG00000013478	rrp15	86	56.410	Danio_rerio
ENSMUSG00000001305	Rrp15	97	75.089	ENSDNOG00000019024	RRP15	98	76.157	Dasypus_novemcinctus
ENSMUSG00000001305	Rrp15	96	75.185	ENSDORG00000004058	Rrp15	97	75.185	Dipodomys_ordii
ENSMUSG00000001305	Rrp15	72	51.196	ENSEBUG00000011777	rrp15	85	51.196	Eptatretus_burgeri
ENSMUSG00000001305	Rrp15	98	77.739	ENSEASG00005003511	RRP15	99	77.739	Equus_asinus_asinus
ENSMUSG00000001305	Rrp15	99	77.003	ENSECAG00000027736	RRP15	100	77.003	Equus_caballus
ENSMUSG00000001305	Rrp15	99	77.003	ENSECAG00000037716	RRP15	100	77.003	Equus_caballus
ENSMUSG00000001305	Rrp15	76	78.605	ENSEEUG00000008052	RRP15	96	79.070	Erinaceus_europaeus
ENSMUSG00000001305	Rrp15	66	66.667	ENSELUG00000011708	rrp15	73	58.333	Esox_lucius
ENSMUSG00000001305	Rrp15	95	76.923	ENSFCAG00000024947	RRP15	95	76.923	Felis_catus
ENSMUSG00000001305	Rrp15	73	65.534	ENSFALG00000012213	RRP15	90	64.815	Ficedula_albicollis
ENSMUSG00000001305	Rrp15	97	73.381	ENSFDAG00000010329	RRP15	99	73.381	Fukomys_damarensis
ENSMUSG00000001305	Rrp15	83	52.564	ENSFHEG00000019028	rrp15	83	52.137	Fundulus_heteroclitus
ENSMUSG00000001305	Rrp15	82	55.652	ENSGMOG00000017385	rrp15	100	55.652	Gadus_morhua
ENSMUSG00000001305	Rrp15	77	66.364	ENSGALG00000009615	RRP15	84	66.364	Gallus_gallus
ENSMUSG00000001305	Rrp15	86	48.963	ENSGAFG00000003524	rrp15	76	51.111	Gambusia_affinis
ENSMUSG00000001305	Rrp15	78	54.585	ENSGACG00000014078	rrp15	75	63.536	Gasterosteus_aculeatus
ENSMUSG00000001305	Rrp15	74	68.095	ENSGAGG00000013113	RRP15	80	68.095	Gopherus_agassizii
ENSMUSG00000001305	Rrp15	99	71.228	ENSGGOG00000016603	RRP15	99	71.228	Gorilla_gorilla
ENSMUSG00000001305	Rrp15	68	61.053	ENSHBUG00000011251	rrp15	89	57.407	Haplochromis_burtoni
ENSMUSG00000001305	Rrp15	95	72.388	ENSHGLG00000002183	RRP15	97	72.388	Heterocephalus_glaber_female
ENSMUSG00000001305	Rrp15	95	72.388	ENSHGLG00100003137	RRP15	97	72.388	Heterocephalus_glaber_male
ENSMUSG00000001305	Rrp15	86	53.878	ENSHCOG00000021163	rrp15	84	54.978	Hippocampus_comes
ENSMUSG00000001305	Rrp15	67	63.102	ENSIPUG00000017259	rrp15	72	57.328	Ictalurus_punctatus
ENSMUSG00000001305	Rrp15	95	79.554	ENSSTOG00000001244	RRP15	95	79.554	Ictidomys_tridecemlineatus
ENSMUSG00000001305	Rrp15	96	72.527	ENSJJAG00000016693	Rrp15	98	72.963	Jaculus_jaculus
ENSMUSG00000001305	Rrp15	79	52.889	ENSKMAG00000007855	rrp15	92	52.889	Kryptolebias_marmoratus
ENSMUSG00000001305	Rrp15	68	64.583	ENSLBEG00000024092	rrp15	80	58.996	Labrus_bergylta
ENSMUSG00000001305	Rrp15	68	64.583	ENSLBEG00000013707	RRP15	78	59.746	Labrus_bergylta
ENSMUSG00000001305	Rrp15	95	56.522	ENSLACG00000008503	RRP15	94	56.522	Latimeria_chalumnae
ENSMUSG00000001305	Rrp15	74	64.762	ENSLOCG00000015920	rrp15	84	64.762	Lepisosteus_oculatus
ENSMUSG00000001305	Rrp15	95	76.667	ENSLAFG00000014869	-	99	76.667	Loxodonta_africana
ENSMUSG00000001305	Rrp15	95	64.338	ENSLAFG00000031712	-	95	64.706	Loxodonta_africana
ENSMUSG00000001305	Rrp15	99	73.333	ENSMFAG00000046095	RRP15	99	72.982	Macaca_fascicularis
ENSMUSG00000001305	Rrp15	99	72.982	ENSMMUG00000004070	RRP15	99	72.632	Macaca_mulatta
ENSMUSG00000001305	Rrp15	99	73.333	ENSMNEG00000044170	RRP15	99	72.982	Macaca_nemestrina
ENSMUSG00000001305	Rrp15	99	74.113	ENSMLEG00000043907	RRP15	99	73.759	Mandrillus_leucophaeus
ENSMUSG00000001305	Rrp15	70	57.500	ENSMAMG00000006386	rrp15	91	53.913	Mastacembelus_armatus
ENSMUSG00000001305	Rrp15	68	61.579	ENSMZEG00005025172	rrp15	89	57.870	Maylandia_zebra
ENSMUSG00000001305	Rrp15	75	67.925	ENSMGAG00000009399	RRP15	81	67.925	Meleagris_gallopavo
ENSMUSG00000001305	Rrp15	99	84.286	ENSMAUG00000020012	Rrp15	99	84.286	Mesocricetus_auratus
ENSMUSG00000001305	Rrp15	79	75.111	ENSMICG00000001591	RRP15	96	75.111	Microcebus_murinus
ENSMUSG00000001305	Rrp15	98	87.319	ENSMOCG00000019339	Rrp15	99	87.319	Microtus_ochrogaster
ENSMUSG00000001305	Rrp15	64	65.746	ENSMMOG00000006718	rrp15	71	63.402	Mola_mola
ENSMUSG00000001305	Rrp15	95	67.025	ENSMODG00000004288	RRP15	98	65.591	Monodelphis_domestica
ENSMUSG00000001305	Rrp15	80	53.540	ENSMALG00000010161	rrp15	84	55.507	Monopterus_albus
ENSMUSG00000001305	Rrp15	99	97.133	MGP_CAROLIEiJ_G0015027	Rrp15	99	97.133	Mus_caroli
ENSMUSG00000001305	Rrp15	99	95.341	MGP_PahariEiJ_G0028259	Rrp15	99	95.341	Mus_pahari
ENSMUSG00000001305	Rrp15	100	98.577	MGP_SPRETEiJ_G0015827	Rrp15	100	98.577	Mus_spretus
ENSMUSG00000001305	Rrp15	95	77.206	ENSMPUG00000004251	RRP15	98	77.206	Mustela_putorius_furo
ENSMUSG00000001305	Rrp15	94	75.655	ENSMLUG00000025093	RRP15	98	74.194	Myotis_lucifugus
ENSMUSG00000001305	Rrp15	95	77.985	ENSNGAG00000007801	Rrp15	96	77.985	Nannospalax_galili
ENSMUSG00000001305	Rrp15	52	60.690	ENSNBRG00000022031	rrp15	65	60.690	Neolamprologus_brichardi
ENSMUSG00000001305	Rrp15	99	72.632	ENSNLEG00000031373	RRP15	99	72.632	Nomascus_leucogenys
ENSMUSG00000001305	Rrp15	54	76.991	ENSMEUG00000009407	-	62	76.991	Notamacropus_eugenii
ENSMUSG00000001305	Rrp15	95	67.164	ENSOPRG00000010164	RRP15	95	64.925	Ochotona_princeps
ENSMUSG00000001305	Rrp15	75	76.526	ENSODEG00000013879	RRP15	96	76.526	Octodon_degus
ENSMUSG00000001305	Rrp15	80	70.354	ENSOANG00000008552	RRP15	78	70.354	Ornithorhynchus_anatinus
ENSMUSG00000001305	Rrp15	99	75.352	ENSOCUG00000017863	RRP15	99	75.704	Oryctolagus_cuniculus
ENSMUSG00000001305	Rrp15	84	49.367	ENSORLG00000003526	rrp15	77	51.142	Oryzias_latipes
ENSMUSG00000001305	Rrp15	78	52.968	ENSORLG00020022526	rrp15	75	52.968	Oryzias_latipes_hni
ENSMUSG00000001305	Rrp15	75	52.000	ENSOMEG00000012920	rrp15	83	53.670	Oryzias_melastigma
ENSMUSG00000001305	Rrp15	78	77.928	ENSOGAG00000010180	RRP15	93	77.928	Otolemur_garnettii
ENSMUSG00000001305	Rrp15	97	74.368	ENSOARG00000011531	RRP15	90	74.368	Ovis_aries
ENSMUSG00000001305	Rrp15	99	72.281	ENSPPAG00000042109	RRP15	99	71.930	Pan_paniscus
ENSMUSG00000001305	Rrp15	95	77.407	ENSPPRG00000012970	RRP15	95	77.407	Panthera_pardus
ENSMUSG00000001305	Rrp15	95	76.557	ENSPTIG00000019968	RRP15	95	76.557	Panthera_tigris_altaica
ENSMUSG00000001305	Rrp15	99	72.281	ENSPTRG00000039779	RRP15	99	71.930	Pan_troglodytes
ENSMUSG00000001305	Rrp15	99	73.333	ENSPANG00000016573	RRP15	99	72.982	Papio_anubis
ENSMUSG00000001305	Rrp15	91	56.202	ENSPKIG00000000018	rrp15	80	57.787	Paramormyrops_kingsleyae
ENSMUSG00000001305	Rrp15	75	69.340	ENSPSIG00000007990	RRP15	88	69.340	Pelodiscus_sinensis
ENSMUSG00000001305	Rrp15	80	57.895	ENSPMGG00000018156	rrp15	87	57.895	Periophthalmus_magnuspinnatus
ENSMUSG00000001305	Rrp15	99	83.929	ENSPEMG00000009408	Rrp15	99	83.929	Peromyscus_maniculatus_bairdii
ENSMUSG00000001305	Rrp15	79	73.778	ENSPCIG00000007849	RRP15	80	73.778	Phascolarctos_cinereus
ENSMUSG00000001305	Rrp15	86	47.934	ENSPFOG00000020596	rrp15	95	51.931	Poecilia_formosa
ENSMUSG00000001305	Rrp15	86	48.548	ENSPLAG00000012226	rrp15	89	51.709	Poecilia_latipinna
ENSMUSG00000001305	Rrp15	86	48.548	ENSPMEG00000014598	rrp15	89	51.709	Poecilia_mexicana
ENSMUSG00000001305	Rrp15	84	46.639	ENSPREG00000014485	rrp15	78	49.362	Poecilia_reticulata
ENSMUSG00000001305	Rrp15	99	72.632	ENSPPYG00000000214	RRP15	99	72.281	Pongo_abelii
ENSMUSG00000001305	Rrp15	97	58.719	ENSPCAG00000007365	RRP15	98	59.783	Procavia_capensis
ENSMUSG00000001305	Rrp15	72	90.625	ENSPCOG00000006283	RRP15	99	90.625	Propithecus_coquereli
ENSMUSG00000001305	Rrp15	81	69.828	ENSPVAG00000017427	RRP15	98	69.828	Pteropus_vampyrus
ENSMUSG00000001305	Rrp15	72	59.701	ENSPNYG00000009219	rrp15	89	57.407	Pundamilia_nyererei
ENSMUSG00000001305	Rrp15	68	63.158	ENSPNAG00000011807	rrp15	88	56.148	Pygocentrus_nattereri
ENSMUSG00000001305	Rrp15	99	90.681	ENSRNOG00000002450	Rrp15	99	90.681	Rattus_norvegicus
ENSMUSG00000001305	Rrp15	99	71.930	ENSRBIG00000033496	RRP15	99	71.930	Rhinopithecus_bieti
ENSMUSG00000001305	Rrp15	99	71.930	ENSRROG00000043420	RRP15	99	71.930	Rhinopithecus_roxellana
ENSMUSG00000001305	Rrp15	95	63.197	ENSSBOG00000011565	-	94	63.197	Saimiri_boliviensis_boliviensis
ENSMUSG00000001305	Rrp15	99	68.881	ENSSBOG00000031710	-	95	70.803	Saimiri_boliviensis_boliviensis
ENSMUSG00000001305	Rrp15	96	66.187	ENSSHAG00000017509	RRP15	98	66.300	Sarcophilus_harrisii
ENSMUSG00000001305	Rrp15	82	59.483	ENSSFOG00015009749	rrp15	93	59.483	Scleropages_formosus
ENSMUSG00000001305	Rrp15	76	54.460	ENSSMAG00000015836	rrp15	90	53.390	Scophthalmus_maximus
ENSMUSG00000001305	Rrp15	69	61.735	ENSSDUG00000004910	rrp15	92	55.556	Seriola_dumerili
ENSMUSG00000001305	Rrp15	69	61.224	ENSSLDG00000010964	rrp15	99	55.466	Seriola_lalandi_dorsalis
ENSMUSG00000001305	Rrp15	74	63.158	ENSSPUG00000011327	RRP15	80	63.158	Sphenodon_punctatus
ENSMUSG00000001305	Rrp15	62	58.011	ENSSPAG00000016072	rrp15	86	58.730	Stegastes_partitus
ENSMUSG00000001305	Rrp15	96	72.727	ENSSSCG00000027846	RRP15	99	72.199	Sus_scrofa
ENSMUSG00000001305	Rrp15	73	67.308	ENSTGUG00000002841	RRP15	95	67.308	Taeniopygia_guttata
ENSMUSG00000001305	Rrp15	83	55.983	ENSTRUG00000008510	rrp15	89	60.185	Takifugu_rubripes
ENSMUSG00000001305	Rrp15	67	64.550	ENSTNIG00000006255	rrp15	88	64.894	Tetraodon_nigroviridis
ENSMUSG00000001305	Rrp15	72	60.488	ENSTNIG00000002237	-	97	60.488	Tetraodon_nigroviridis
ENSMUSG00000001305	Rrp15	75	79.290	ENSTBEG00000014949	RRP15	75	79.290	Tupaia_belangeri
ENSMUSG00000001305	Rrp15	95	76.667	ENSTTRG00000013578	RRP15	95	76.667	Tursiops_truncatus
ENSMUSG00000001305	Rrp15	78	81.448	ENSUAMG00000016351	RRP15	80	80.088	Ursus_americanus
ENSMUSG00000001305	Rrp15	95	78.022	ENSUMAG00000020609	RRP15	97	76.978	Ursus_maritimus
ENSMUSG00000001305	Rrp15	95	78.519	ENSVPAG00000008897	RRP15	95	78.519	Vicugna_pacos
ENSMUSG00000001305	Rrp15	97	73.145	ENSVVUG00000012928	RRP15	91	73.145	Vulpes_vulpes
ENSMUSG00000001305	Rrp15	67	57.895	ENSXETG00000032988	RRP15	88	60.000	Xenopus_tropicalis
ENSMUSG00000001305	Rrp15	84	50.211	ENSXCOG00000011820	rrp15	81	50.427	Xiphophorus_couchianus
ENSMUSG00000001305	Rrp15	84	50.211	ENSXMAG00000020298	rrp15	82	50.427	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0006364	rRNA processing	-	IEA	Process
GO:0030687	preribosome, large subunit precursor	21873635.	IBA	Component