EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000001524 (Gene tree)
Gene ID: 14885
Gene Symbol: Gtf2h4
Alias: p52
Full Name: general transcription factor II H%2C polypeptide 4
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 6010
Position: chr17: 35667730-35673739
Accession: 1338799
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000160752	-	1569	-	ENSMUSP00000124458	184 (aa)	-	E0CY64
ENSMUST00000001565	-	1679	XM_006523668	ENSMUSP00000001565	463 (aa)	XP_006523731	O70422
ENSMUST00000159852	-	331	-	ENSMUSP00000124060	61 (aa)	-	E0CYM3
ENSMUST00000162266	-	367	-	ENSMUSP00000124103	91 (aa)	-	E0CYK8
ENSMUST00000159671	-	620	-	-	- (aa)	-	-
ENSMUST00000160711	-	271	-	-	- (aa)	-	-
ENSMUST00000160039	-	660	-	ENSMUSP00000124683	164 (aa)	-	E0CXV5
ENSMUST00000160535	-	731	-	-	- (aa)	-	-
ENSMUST00000160734	-	1569	-	ENSMUSP00000124335	463 (aa)	-	O70422
ENSMUST00000162604	-	827	-	-	- (aa)	-	-
ENSMUST00000162927	-	920	-	-	- (aa)	-	-
ENSMUST00000162894	-	925	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000001524's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03022	Basal transcription factors	KEGG
mmu03420	Nucleotide excision repair	KEGG
mmu05203	Viral carcinogenesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000001524's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000438	core TFIIH complex portion of holo TFIIH complex	-	ISO	Component
GO:0000439	transcription factor TFIIH core complex	21873635.	IBA	Component
GO:0001671	ATPase activator activity	-	IEA	Function
GO:0003690	double-stranded DNA binding	21873635.	IBA	Function
GO:0004672	protein kinase activity	-	ISO	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005669	transcription factor TFIID complex	-	ISO	Component
GO:0005675	transcription factor TFIIH holo complex	21873635.	IBA	Component
GO:0005675	transcription factor TFIIH holo complex	-	ISO	Component
GO:0006281	DNA repair	-	IEA	Process
GO:0006289	nucleotide-excision repair	21873635.	IBA	Process
GO:0006366	transcription by RNA polymerase II	-	ISO	Process
GO:0006974	cellular response to DNA damage stimulus	-	IEA	Process
GO:0008094	DNA-dependent ATPase activity	-	ISO	Function
GO:0008353	RNA polymerase II CTD heptapeptide repeat kinase activity	21873635.	IBA	Function
GO:0008353	RNA polymerase II CTD heptapeptide repeat kinase activity	-	ISO	Function
GO:0016251	RNA polymerase II general transcription initiation factor activity	-	ISO	Function
GO:0016607	nuclear speck	-	ISO	Component
GO:0070816	phosphorylation of RNA polymerase II C-terminal domain	21873635.	IBA	Process