EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000001552 (Gene tree)
Gene ID: 16480
Gene Symbol: Jup
Alias: Ctnng|D930025P04Rik|PG|gamma-catenin|plakoglobin
Full Name: junction plakoglobin
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 28806
Position: chr11: 100368958-100397763
Accession: 96650
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000107403	-	2386	-	ENSMUSP00000103026	745 (aa)	-	Q02257
ENSMUST00000124659	-	2913	-	-	- (aa)	-	-
ENSMUST00000001592	-	3205	XM_006532315	ENSMUSP00000001592	745 (aa)	XP_006532378	Q02257
ENSMUST00000152774	-	758	-	-	- (aa)	-	-
ENSMUST00000151476	-	441	-	-	- (aa)	-	-
ENSMUST00000155746	-	684	-	-	- (aa)	-	-
ENSMUST00000123903	-	742	-	-	- (aa)	-	-
ENSMUST00000128268	-	502	-	-	- (aa)	-	-
ENSMUST00000149798	-	667	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000001552's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu05200	Pathways in cancer	KEGG
mmu05202	Transcriptional misregulation in cancer	KEGG
mmu05221	Acute myeloid leukemia	KEGG
mmu05226	Gastric cancer	KEGG
mmu05412	Arrhythmogenic right ventricular cardiomyopathy (ARVC)	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000001552's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000001552	Jup	100	98.389	ENSG00000173801	JUP	100	98.389	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001954	positive regulation of cell-matrix adhesion	-	ISO	Process
GO:0002159	desmosome assembly	8954745.9847250.18496566.	IMP	Process
GO:0002159	desmosome assembly	-	ISO	Process
GO:0003713	transcription coactivator activity	21873635.	IBA	Function
GO:0003713	transcription coactivator activity	-	ISO	Function
GO:0005198	structural molecule activity	-	ISO	Function
GO:0005515	protein binding	12847106.14579029.14673151.16973135.	IPI	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005829	cytosol	12847106.	IDA	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0005882	intermediate filament	16917092.	IDA	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0005911	cell-cell junction	12847106.18816447.21296051.	IDA	Component
GO:0005911	cell-cell junction	-	ISO	Component
GO:0005913	cell-cell adherens junction	21873635.	IBA	Component
GO:0005913	cell-cell adherens junction	8582267.15775979.	IDA	Component
GO:0005913	cell-cell adherens junction	-	ISO	Component
GO:0005916	fascia adherens	-	ISO	Component
GO:0007155	cell adhesion	12847106.	IDA	Process
GO:0009898	cytoplasmic side of plasma membrane	-	ISO	Component
GO:0014704	intercalated disc	-	ISO	Component
GO:0015629	actin cytoskeleton	-	ISO	Component
GO:0016020	membrane	-	IEA	Component
GO:0016327	apicolateral plasma membrane	-	ISO	Component
GO:0016328	lateral plasma membrane	-	ISO	Component
GO:0016342	catenin complex	21873635.	IBA	Component
GO:0016342	catenin complex	8853988.	IDA	Component
GO:0016342	catenin complex	-	ISO	Component
GO:0016477	cell migration	-	ISO	Process
GO:0019901	protein kinase binding	-	ISO	Function
GO:0019903	protein phosphatase binding	21873635.	IBA	Function
GO:0019903	protein phosphatase binding	-	ISO	Function
GO:0030018	Z disc	8821035.	IDA	Component
GO:0030054	cell junction	-	IEA	Component
GO:0030057	desmosome	9864371.10662781.14673151.15775979.	IDA	Component
GO:0030057	desmosome	18496566.21880664.	IMP	Component
GO:0030057	desmosome	-	ISO	Component
GO:0032993	protein-DNA complex	-	ISO	Component
GO:0035257	nuclear hormone receptor binding	21873635.	IBA	Function
GO:0042127	regulation of cell proliferation	-	ISO	Process
GO:0042307	positive regulation of protein import into nucleus	-	ISO	Process
GO:0043537	negative regulation of blood vessel endothelial cell migration	-	ISO	Process
GO:0043588	skin development	8954745.	IMP	Process
GO:0045294	alpha-catenin binding	21873635.	IBA	Function
GO:0045294	alpha-catenin binding	14579029.	IPI	Function
GO:0045294	alpha-catenin binding	-	ISO	Function
GO:0045296	cadherin binding	21873635.	IBA	Function
GO:0045296	cadherin binding	-	ISO	Function
GO:0045766	positive regulation of angiogenesis	-	ISO	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0050839	cell adhesion molecule binding	-	ISO	Function
GO:0050982	detection of mechanical stimulus	-	ISO	Process
GO:0051091	positive regulation of DNA-binding transcription factor activity	-	ISO	Process
GO:0051291	protein heterooligomerization	-	ISO	Process
GO:0071665	gamma-catenin-TCF7L2 complex	-	ISO	Component
GO:0071681	cellular response to indole-3-methanol	-	ISO	Process
GO:0072659	protein localization to plasma membrane	-	ISO	Process
GO:0086073	bundle of His cell-Purkinje myocyte adhesion involved in cell communication	-	ISO	Process
GO:0086091	regulation of heart rate by cardiac conduction	-	ISO	Process
GO:0098609	cell-cell adhesion	8954745.	IMP	Process
GO:0098609	cell-cell adhesion	-	ISO	Process
GO:0098911	regulation of ventricular cardiac muscle cell action potential	-	ISO	Process