EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000001774 (Gene tree)
Gene ID: 66917
Gene Symbol: Chordc1
Alias: 1110001O09Rik|Chp-1|morgana
Full Name: cysteine and histidine-rich domain (CHORD)-containing%2C zinc-binding protein 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 25318
Position: chr9: 18292125-18317442
Accession: 1914167
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25993413	Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression	IC & MEF	2015	Boucas J	DOI: 10.1371/journal.pone.0125745

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000213605	-	519	-	ENSMUSP00000149900	119 (aa)	-	A0A1L1SSG7
ENSMUST00000001825	-	5789	-	ENSMUSP00000001825	331 (aa)	-	Q9D1P4
ENSMUST00000216666	-	624	-	-	- (aa)	-	-
ENSMUST00000217031	-	810	-	ENSMUSP00000150569	256 (aa)	-	A0A1L1SU22
ENSMUST00000217083	-	647	-	ENSMUSP00000150527	184 (aa)	-	A0A1L1STZ1
ENSMUST00000216526	-	659	-	-	- (aa)	-	-
ENSMUST00000214441	-	941	-	-	- (aa)	-	-
ENSMUST00000216800	-	533	-	ENSMUSP00000150443	113 (aa)	-	A0A1L1STQ1
ENSMUST00000215421	-	487	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000001774's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000001774's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000001774	Chordc1	100	96.196	ENSG00000110172	CHORDC1	100	96.196	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005509	calcium ion binding	12965203.	IDA	Function
GO:0005515	protein binding	23184943.	IPI	Function
GO:0005524	ATP binding	23184943.	IDA	Function
GO:0008270	zinc ion binding	12965203.	IDA	Function
GO:0010824	regulation of centrosome duplication	20230755.	IMP	Process
GO:0043531	ADP binding	23184943.	IDA	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0051879	Hsp90 protein binding	-	ISO	Function
GO:0061077	chaperone-mediated protein folding	20493909.	IDA	Process
GO:1900034	regulation of cellular response to heat	20493909.	IDA	Process
GO:2000299	negative regulation of Rho-dependent protein serine/threonine kinase activity	20230755.	IDA	Process