EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000001964 (Gene tree)
Gene ID: 13726
Gene Symbol: Emd
Alias: -
Full Name: emerin
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 6862
Position: chrX: 74254687-74261548
Accession: 108117
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000088313	-	1338	XM_011247521	ENSMUSP00000094133	158 (aa)	XP_011245823	Q3THM8
ENSMUST00000129516	-	614	-	-	- (aa)	-	-
ENSMUST00000002029	-	1595	-	ENSMUSP00000002029	259 (aa)	-	O08579
ENSMUST00000096424	-	896	-	ENSMUSP00000094158	223 (aa)	-	I7HJS1
ENSMUST00000119197	-	768	-	ENSMUSP00000112639	170 (aa)	-	B7FAU5
ENSMUST00000152288	-	873	-	ENSMUSP00000115890	65 (aa)	-	D6RFS0

Gene Model

Click here to download ENSMUSG00000001964's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu05410	Hypertrophic cardiomyopathy (HCM)	KEGG
mmu05412	Arrhythmogenic right ventricular cardiomyopathy (ARVC)	KEGG
mmu05414	Dilated cardiomyopathy (DCM)	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000001964's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000001964	Emd	98	75.000	ENSG00000102119	EMD	100	74.545	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003779	actin binding	21873635.	IBA	Function
GO:0003779	actin binding	-	ISO	Function
GO:0005515	protein binding	19933576.	IPI	Function
GO:0005634	nucleus	22349700.	IDA	Component
GO:0005635	nuclear envelope	21873635.	IBA	Component
GO:0005635	nuclear envelope	19933576.	IDA	Component
GO:0005635	nuclear envelope	-	ISO	Component
GO:0005635	nuclear envelope	-	ISO	Component
GO:0005637	nuclear inner membrane	21873635.	IBA	Component
GO:0005637	nuclear inner membrane	-	ISO	Component
GO:0005637	nuclear inner membrane	11591818.	TAS	Component
GO:0005640	nuclear outer membrane	-	ISO	Component
GO:0005652	nuclear lamina	11591818.	TAS	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005783	endoplasmic reticulum	-	ISO	Component
GO:0005819	spindle	21873635.	IBA	Component
GO:0005819	spindle	-	ISO	Component
GO:0005874	microtubule	-	IEA	Component
GO:0016020	membrane	-	IEA	Component
GO:0016021	integral component of membrane	-	ISO	Component
GO:0031616	spindle pole centrosome	-	ISO	Component
GO:0031965	nuclear membrane	21873635.	IBA	Component
GO:0031965	nuclear membrane	17164264.	IDA	Component
GO:0031965	nuclear membrane	-	ISO	Component
GO:0032541	cortical endoplasmic reticulum	-	ISO	Component
GO:0035914	skeletal muscle cell differentiation	19720741.	IGI	Process
GO:0035914	skeletal muscle cell differentiation	19720741.	IMP	Process
GO:0046827	positive regulation of protein export from nucleus	-	ISO	Process
GO:0048147	negative regulation of fibroblast proliferation	-	ISO	Process
GO:0048487	beta-tubulin binding	21873635.	IBA	Function
GO:0048487	beta-tubulin binding	-	ISO	Function
GO:0060828	regulation of canonical Wnt signaling pathway	-	ISO	Process
GO:0071363	cellular response to growth factor stimulus	-	ISO	Process
GO:0090090	negative regulation of canonical Wnt signaling pathway	21873635.	IBA	Process
GO:0090090	negative regulation of canonical Wnt signaling pathway	-	ISO	Process