EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000003226 (Gene tree)
Gene ID: 19386
Gene Symbol: Ranbp2
Alias: A430087B05Rik
Full Name: RAN binding protein 2
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 47437 bases
Position: chr10:58446920-58494356
Accession: 894323
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000003310	zf-RanBP	PF00641.18	3.8e-52	1	6
ENSMUSP00000003310	zf-RanBP	PF00641.18	3.8e-52	2	6
ENSMUSP00000003310	zf-RanBP	PF00641.18	3.8e-52	3	6
ENSMUSP00000003310	zf-RanBP	PF00641.18	3.8e-52	4	6
ENSMUSP00000003310	zf-RanBP	PF00641.18	3.8e-52	5	6
ENSMUSP00000003310	zf-RanBP	PF00641.18	3.8e-52	6	6

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000003310	-	9608	-	ENSMUSP00000003310	3053 (aa)	-	Q9ERU9
ENSMUST00000219332	-	2609	-	-	- (aa)	-	-
ENSMUST00000220131	-	1535	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000003226's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000003226's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000003226	Ranbp2	100	84.329	ENSG00000153201	RANBP2	90	95.652	Homo_sapiens
ENSMUSG00000003226	Ranbp2	100	50.109	ENSAPOG00000017146	si:ch1073-55a19.2	100	50.671	Acanthochromis_polyacanthus
ENSMUSG00000003226	Ranbp2	99	82.293	ENSAMEG00000013078	RANBP2	100	83.313	Ailuropoda_melanoleuca
ENSMUSG00000003226	Ranbp2	100	57.857	ENSACIG00000001203	si:ch1073-55a19.2	100	54.887	Amphilophus_citrinellus
ENSMUSG00000003226	Ranbp2	100	50.372	ENSAPEG00000012495	si:ch1073-55a19.2	100	50.780	Amphiprion_percula
ENSMUSG00000003226	Ranbp2	60	50.614	ENSATEG00000001716	si:ch1073-55a19.2	100	50.874	Anabas_testudineus
ENSMUSG00000003226	Ranbp2	95	64.679	ENSACAG00000002091	RANBP2	100	64.463	Anolis_carolinensis
ENSMUSG00000003226	Ranbp2	100	84.672	ENSANAG00000023124	RANBP2	100	82.855	Aotus_nancymaae
ENSMUSG00000003226	Ranbp2	100	50.887	ENSACLG00000020500	si:ch1073-55a19.2	100	51.486	Astatotilapia_calliptera
ENSMUSG00000003226	Ranbp2	100	78.878	ENSBTAG00000000152	RANBP2	100	81.226	Bos_taurus
ENSMUSG00000003226	Ranbp2	100	84.656	ENSCJAG00000001189	RANBP2	100	85.252	Callithrix_jacchus
ENSMUSG00000003226	Ranbp2	100	78.301	ENSCAFG00000023061	RANBP2	100	80.668	Canis_familiaris
ENSMUSG00000003226	Ranbp2	100	85.803	ENSCAFG00020009314	RANBP2	100	85.868	Canis_lupus_dingo
ENSMUSG00000003226	Ranbp2	100	81.131	ENSCHIG00000012686	RANBP2	100	81.138	Capra_hircus
ENSMUSG00000003226	Ranbp2	99	84.042	ENSTSYG00000001656	RANBP2	100	80.906	Carlito_syrichta
ENSMUSG00000003226	Ranbp2	98	73.748	ENSCAPG00000010687	RANBP2	100	73.748	Cavia_aperea
ENSMUSG00000003226	Ranbp2	100	82.100	ENSCPOG00000000392	RANBP2	100	82.100	Cavia_porcellus
ENSMUSG00000003226	Ranbp2	100	84.747	ENSCCAG00000028166	RANBP2	100	84.910	Cebus_capucinus
ENSMUSG00000003226	Ranbp2	100	85.089	ENSCATG00000032597	RANBP2	100	85.576	Cercocebus_atys
ENSMUSG00000003226	Ranbp2	100	82.524	ENSCLAG00000010533	RANBP2	100	82.524	Chinchilla_lanigera
ENSMUSG00000003226	Ranbp2	100	84.852	ENSCSAG00000017019	RANBP2	100	85.335	Chlorocebus_sabaeus
ENSMUSG00000003226	Ranbp2	63	89.474	ENSCHOG00000012659	-	60	89.474	Choloepus_hoffmanni
ENSMUSG00000003226	Ranbp2	100	68.252	ENSCPBG00000006985	RANBP2	100	69.351	Chrysemys_picta_bellii
ENSMUSG00000003226	Ranbp2	97	81.027	ENSCANG00000041469	RANBP2	100	84.631	Colobus_angolensis_palliatus
ENSMUSG00000003226	Ranbp2	100	91.748	ENSCGRG00001000642	Ranbp2	100	91.748	Cricetulus_griseus_chok1gshd
ENSMUSG00000003226	Ranbp2	100	91.389	ENSCGRG00000008995	Ranbp2	100	91.389	Cricetulus_griseus_crigri
ENSMUSG00000003226	Ranbp2	100	47.700	ENSCSEG00000013280	si:ch1073-55a19.2	100	48.470	Cynoglossus_semilaevis
ENSMUSG00000003226	Ranbp2	100	59.286	ENSCVAG00000016050	si:ch1073-55a19.2	100	59.286	Cyprinodon_variegatus
ENSMUSG00000003226	Ranbp2	100	53.521	ENSDARG00000093125	RANBP2	100	53.521	Danio_rerio
ENSMUSG00000003226	Ranbp2	100	81.751	ENSDNOG00000040501	RANBP2	100	78.842	Dasypus_novemcinctus
ENSMUSG00000003226	Ranbp2	100	85.919	ENSDORG00000002206	Ranbp2	100	86.278	Dipodomys_ordii
ENSMUSG00000003226	Ranbp2	77	100.000	ENSETEG00000008891	-	69	82.483	Echinops_telfairi
ENSMUSG00000003226	Ranbp2	98	54.098	ENSEBUG00000010057	si:ch1073-55a19.2	83	54.211	Eptatretus_burgeri
ENSMUSG00000003226	Ranbp2	100	85.453	ENSEASG00005012918	RANBP2	100	85.453	Equus_asinus_asinus
ENSMUSG00000003226	Ranbp2	97	91.795	ENSECAG00000008458	RANBP2	96	91.795	Equus_caballus
ENSMUSG00000003226	Ranbp2	82	93.846	ENSEEUG00000007806	RANBP2	79	93.846	Erinaceus_europaeus
ENSMUSG00000003226	Ranbp2	99	66.667	ENSELUG00000007763	si:ch1073-55a19.2	94	66.667	Esox_lucius
ENSMUSG00000003226	Ranbp2	99	65.428	ENSFALG00000003519	RANBP2	99	63.977	Ficedula_albicollis
ENSMUSG00000003226	Ranbp2	100	81.417	ENSFDAG00000016912	RANBP2	100	81.450	Fukomys_damarensis
ENSMUSG00000003226	Ranbp2	100	49.253	ENSFHEG00000009774	si:ch1073-55a19.2	100	49.145	Fundulus_heteroclitus
ENSMUSG00000003226	Ranbp2	97	66.906	ENSGMOG00000007071	si:ch1073-55a19.2	94	66.187	Gadus_morhua
ENSMUSG00000003226	Ranbp2	100	49.696	ENSGAFG00000010966	si:ch1073-55a19.2	100	50.078	Gambusia_affinis
ENSMUSG00000003226	Ranbp2	52	47.262	ENSGACG00000006831	si:ch1073-55a19.2	100	50.786	Gasterosteus_aculeatus
ENSMUSG00000003226	Ranbp2	94	68.430	ENSGAGG00000025039	RANBP2	98	67.570	Gopherus_agassizii
ENSMUSG00000003226	Ranbp2	100	50.720	ENSHBUG00000000053	si:ch1073-55a19.2	100	51.329	Haplochromis_burtoni
ENSMUSG00000003226	Ranbp2	100	82.535	ENSHGLG00000018887	RANBP2	100	82.535	Heterocephalus_glaber_female
ENSMUSG00000003226	Ranbp2	100	81.916	ENSHGLG00100007365	RANBP2	100	81.916	Heterocephalus_glaber_male
ENSMUSG00000003226	Ranbp2	100	50.740	ENSHCOG00000019596	si:ch1073-55a19.2	100	50.000	Hippocampus_comes
ENSMUSG00000003226	Ranbp2	100	49.677	ENSIPUG00000019614	si:ch1073-55a19.2	99	52.103	Ictalurus_punctatus
ENSMUSG00000003226	Ranbp2	100	86.110	ENSSTOG00000019518	RANBP2	100	86.110	Ictidomys_tridecemlineatus
ENSMUSG00000003226	Ranbp2	100	82.969	ENSJJAG00000021292	Ranbp2	100	86.259	Jaculus_jaculus
ENSMUSG00000003226	Ranbp2	100	50.420	ENSKMAG00000001158	si:ch1073-55a19.2	100	50.577	Kryptolebias_marmoratus
ENSMUSG00000003226	Ranbp2	94	51.515	ENSLBEG00000027979	si:ch1073-55a19.2	99	51.515	Labrus_bergylta
ENSMUSG00000003226	Ranbp2	100	56.427	ENSLACG00000009728	RANBP2	100	57.883	Latimeria_chalumnae
ENSMUSG00000003226	Ranbp2	100	51.890	ENSLOCG00000010333	si:ch1073-55a19.2	100	54.304	Lepisosteus_oculatus
ENSMUSG00000003226	Ranbp2	100	83.804	ENSLAFG00000000740	RANBP2	100	83.804	Loxodonta_africana
ENSMUSG00000003226	Ranbp2	100	85.089	ENSMFAG00000029029	RANBP2	100	85.637	Macaca_fascicularis
ENSMUSG00000003226	Ranbp2	100	85.089	ENSMMUG00000021019	RANBP2	100	85.637	Macaca_mulatta
ENSMUSG00000003226	Ranbp2	100	85.089	ENSMNEG00000043706	RANBP2	100	85.637	Macaca_nemestrina
ENSMUSG00000003226	Ranbp2	99	83.473	ENSMLEG00000037350	RANBP2	99	83.932	Mandrillus_leucophaeus
ENSMUSG00000003226	Ranbp2	100	50.944	ENSMAMG00000017900	si:ch1073-55a19.2	55	50.762	Mastacembelus_armatus
ENSMUSG00000003226	Ranbp2	100	50.887	ENSMZEG00005010956	si:ch1073-55a19.2	100	51.541	Maylandia_zebra
ENSMUSG00000003226	Ranbp2	99	61.893	ENSMGAG00000014831	-	99	62.971	Meleagris_gallopavo
ENSMUSG00000003226	Ranbp2	100	92.330	ENSMAUG00000013313	Ranbp2	100	92.330	Mesocricetus_auratus
ENSMUSG00000003226	Ranbp2	100	83.755	ENSMICG00000011864	RANBP2	100	83.451	Microcebus_murinus
ENSMUSG00000003226	Ranbp2	100	91.419	ENSMOCG00000012516	Ranbp2	100	91.419	Microtus_ochrogaster
ENSMUSG00000003226	Ranbp2	100	53.409	ENSMMOG00000005743	si:ch1073-55a19.2	100	53.409	Mola_mola
ENSMUSG00000003226	Ranbp2	99	84.304	ENSMODG00000002914	RANBP2	100	84.304	Monodelphis_domestica
ENSMUSG00000003226	Ranbp2	100	50.031	ENSMALG00000004359	si:ch1073-55a19.2	100	50.824	Monopterus_albus
ENSMUSG00000003226	Ranbp2	100	97.318	MGP_PahariEiJ_G0030751	Ranbp2	100	97.318	Mus_pahari
ENSMUSG00000003226	Ranbp2	100	99.705	MGP_SPRETEiJ_G0016147	Ranbp2	100	99.705	Mus_spretus
ENSMUSG00000003226	Ranbp2	99	81.504	ENSMPUG00000010754	RANBP2	100	81.018	Mustela_putorius_furo
ENSMUSG00000003226	Ranbp2	99	81.172	ENSMLUG00000005555	RANBP2	100	81.725	Myotis_lucifugus
ENSMUSG00000003226	Ranbp2	100	87.101	ENSNGAG00000016154	Ranbp2	100	85.175	Nannospalax_galili
ENSMUSG00000003226	Ranbp2	100	50.720	ENSNBRG00000004587	si:ch1073-55a19.2	100	51.512	Neolamprologus_brichardi
ENSMUSG00000003226	Ranbp2	99	81.829	ENSNLEG00000007501	RANBP2	99	82.250	Nomascus_leucogenys
ENSMUSG00000003226	Ranbp2	92	87.459	ENSOPRG00000009720	-	94	87.459	Ochotona_princeps
ENSMUSG00000003226	Ranbp2	100	81.524	ENSODEG00000013212	RANBP2	100	81.524	Octodon_degus
ENSMUSG00000003226	Ranbp2	52	47.971	ENSONIG00000004346	si:ch1073-55a19.2	100	51.965	Oreochromis_niloticus
ENSMUSG00000003226	Ranbp2	79	70.565	ENSOANG00000004894	RANBP2	100	68.743	Ornithorhynchus_anatinus
ENSMUSG00000003226	Ranbp2	100	83.596	ENSOCUG00000001165	RANBP2	100	80.592	Oryctolagus_cuniculus
ENSMUSG00000003226	Ranbp2	100	49.585	ENSORLG00000015523	si:ch1073-55a19.2	100	49.387	Oryzias_latipes
ENSMUSG00000003226	Ranbp2	100	57.143	ENSORLG00020003797	si:ch1073-55a19.2	100	57.143	Oryzias_latipes_hni
ENSMUSG00000003226	Ranbp2	100	50.250	ENSORLG00015004994	si:ch1073-55a19.2	100	50.736	Oryzias_latipes_hsok
ENSMUSG00000003226	Ranbp2	100	53.957	ENSOMEG00000022969	si:ch1073-55a19.2	100	50.501	Oryzias_melastigma
ENSMUSG00000003226	Ranbp2	100	85.812	ENSOGAG00000028976	RANBP2	100	85.747	Otolemur_garnettii
ENSMUSG00000003226	Ranbp2	99	80.806	ENSOARG00000000558	RANBP2	100	80.812	Ovis_aries
ENSMUSG00000003226	Ranbp2	100	85.089	ENSPANG00000000990	RANBP2	100	85.576	Papio_anubis
ENSMUSG00000003226	Ranbp2	93	51.007	ENSPKIG00000021054	-	99	51.007	Paramormyrops_kingsleyae
ENSMUSG00000003226	Ranbp2	100	52.564	ENSPKIG00000010971	RANBP2	100	52.564	Paramormyrops_kingsleyae
ENSMUSG00000003226	Ranbp2	99	69.074	ENSPSIG00000007182	RANBP2	99	70.332	Pelodiscus_sinensis
ENSMUSG00000003226	Ranbp2	93	94.723	ENSPEMG00000021565	Ranbp2	97	94.723	Peromyscus_maniculatus_bairdii
ENSMUSG00000003226	Ranbp2	84	47.794	ENSPMAG00000007195	si:ch1073-55a19.2	100	61.314	Petromyzon_marinus
ENSMUSG00000003226	Ranbp2	100	73.306	ENSPCIG00000013912	RANBP2	100	75.837	Phascolarctos_cinereus
ENSMUSG00000003226	Ranbp2	100	49.152	ENSPFOG00000007377	si:ch1073-55a19.2	100	49.737	Poecilia_formosa
ENSMUSG00000003226	Ranbp2	100	49.369	ENSPLAG00000012373	si:ch1073-55a19.2	100	49.782	Poecilia_latipinna
ENSMUSG00000003226	Ranbp2	100	49.306	ENSPMEG00000005561	si:ch1073-55a19.2	100	49.938	Poecilia_mexicana
ENSMUSG00000003226	Ranbp2	100	57.143	ENSPREG00000013331	si:ch1073-55a19.2	100	49.519	Poecilia_reticulata
ENSMUSG00000003226	Ranbp2	72	79.512	ENSPPYG00000012139	-	100	80.312	Pongo_abelii
ENSMUSG00000003226	Ranbp2	95	86.435	ENSPCAG00000000957	RANBP2	98	86.435	Procavia_capensis
ENSMUSG00000003226	Ranbp2	100	80.986	ENSPCOG00000008879	RANBP2	100	81.377	Propithecus_coquereli
ENSMUSG00000003226	Ranbp2	97	84.906	ENSPVAG00000003883	RANBP2	94	84.906	Pteropus_vampyrus
ENSMUSG00000003226	Ranbp2	100	50.886	ENSPNYG00000015971	si:ch1073-55a19.2	100	51.485	Pundamilia_nyererei
ENSMUSG00000003226	Ranbp2	50	49.875	ENSPNAG00000026129	si:ch1073-55a19.2	100	52.114	Pygocentrus_nattereri
ENSMUSG00000003226	Ranbp2	100	94.678	ENSRNOG00000000796	Ranbp2	100	94.678	Rattus_norvegicus
ENSMUSG00000003226	Ranbp2	100	85.098	ENSRBIG00000043515	RANBP2	100	85.585	Rhinopithecus_bieti
ENSMUSG00000003226	Ranbp2	100	82.494	ENSRROG00000026113	RANBP2	100	85.516	Rhinopithecus_roxellana
ENSMUSG00000003226	Ranbp2	100	83.079	ENSSBOG00000035336	RANBP2	100	84.106	Saimiri_boliviensis_boliviensis
ENSMUSG00000003226	Ranbp2	99	71.862	ENSSHAG00000004676	RANBP2	99	75.122	Sarcophilus_harrisii
ENSMUSG00000003226	Ranbp2	99	53.571	ENSSFOG00015003943	-	99	52.255	Scleropages_formosus
ENSMUSG00000003226	Ranbp2	100	51.679	ENSSFOG00015023201	RANBP2	100	50.838	Scleropages_formosus
ENSMUSG00000003226	Ranbp2	61	49.587	ENSSMAG00000007331	si:ch1073-55a19.2	100	50.031	Scophthalmus_maximus
ENSMUSG00000003226	Ranbp2	100	50.542	ENSSDUG00000013160	si:ch1073-55a19.2	100	50.824	Seriola_dumerili
ENSMUSG00000003226	Ranbp2	100	51.865	ENSSLDG00000023392	si:ch1073-55a19.2	100	50.903	Seriola_lalandi_dorsalis
ENSMUSG00000003226	Ranbp2	89	86.453	ENSSARG00000005595	RANBP2	77	86.453	Sorex_araneus
ENSMUSG00000003226	Ranbp2	63	50.416	ENSSPAG00000008000	si:ch1073-55a19.2	100	51.415	Stegastes_partitus
ENSMUSG00000003226	Ranbp2	100	81.698	ENSSSCG00000008136	RANBP2	98	80.967	Sus_scrofa
ENSMUSG00000003226	Ranbp2	98	68.209	ENSTGUG00000009571	RANBP2	100	68.303	Taeniopygia_guttata
ENSMUSG00000003226	Ranbp2	95	89.744	ENSTTRG00000007400	RANBP2	96	89.744	Tursiops_truncatus
ENSMUSG00000003226	Ranbp2	94	83.237	ENSUAMG00000020025	RANBP2	99	83.547	Ursus_americanus
ENSMUSG00000003226	Ranbp2	93	87.831	ENSVPAG00000006676	RANBP2	92	87.831	Vicugna_pacos
ENSMUSG00000003226	Ranbp2	100	84.219	ENSVVUG00000014899	RANBP2	100	85.314	Vulpes_vulpes
ENSMUSG00000003226	Ranbp2	94	56.146	ENSXETG00000016006	ranbp2	99	57.187	Xenopus_tropicalis
ENSMUSG00000003226	Ranbp2	99	48.734	ENSXCOG00000000752	si:ch1073-55a19.2	99	49.501	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000413	protein peptidyl-prolyl isomerization	-	IEA	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0003755	peptidyl-prolyl cis-trans isomerase activity	-	IEA	Function
GO:0005096	GTPase activator activity	21873635.	IBA	Function
GO:0005515	protein binding	16332688.17069463.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005643	nuclear pore	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005739	mitochondrion	17069463.	IDA	Component
GO:0006111	regulation of gluconeogenesis	17069463.	IMP	Process
GO:0006457	protein folding	-	IEA	Process
GO:0006607	NLS-bearing protein import into nucleus	21873635.	IBA	Process
GO:0008536	Ran GTPase binding	21873635.	IBA	Function
GO:0015031	protein transport	-	IEA	Process
GO:0016020	membrane	-	IEA	Component
GO:0016740	transferase activity	-	IEA	Function
GO:0019789	SUMO transferase activity	18394993.	EXP	Function
GO:0033133	positive regulation of glucokinase activity	17069463.	IDA	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0046907	intracellular transport	-	IEA	Process
GO:0051028	mRNA transport	-	IEA	Process