EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000003808 (Gene tree)
Gene ID: 66590
Gene Symbol: Farsa
Alias: 0610012A19Rik|Farsla
Full Name: phenylalanyl-tRNA synthetase%2C alpha subunit
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 12269 bases
Position: chr8:84856989-84869257
Accession: 1913840
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000105376	tRNA-synt_2d	PF01409.20	1.4e-90	1	1
ENSMUSP00000003906	tRNA-synt_2d	PF01409.20	2e-90	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000141480	-	730	-	-	- (aa)	-	-
ENSMUST00000109754	-	1795	-	ENSMUSP00000105376	507 (aa)	-	E9PWY9
ENSMUST00000144404	-	3341	-	-	- (aa)	-	-
ENSMUST00000129595	-	1920	-	-	- (aa)	-	-
ENSMUST00000156970	-	1708	-	ENSMUSP00000120609	105 (aa)	-	D6RIJ2
ENSMUST00000003906	-	1826	XM_006531288	ENSMUSP00000003906	508 (aa)	-	Q8C0C7

Gene Model

Click here to download ENSMUSG00000003808's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000003808's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000003808	Farsa	100	92.520	ENSG00000179115	FARSA	100	92.520	Homo_sapiens
ENSMUSG00000003808	Farsa	98	76.815	ENSAPOG00000011465	farsa	99	76.815	Acanthochromis_polyacanthus
ENSMUSG00000003808	Farsa	99	90.927	ENSAMEG00000012446	FARSA	99	90.927	Ailuropoda_melanoleuca
ENSMUSG00000003808	Farsa	98	72.782	ENSACIG00000020499	farsa	99	72.782	Amphilophus_citrinellus
ENSMUSG00000003808	Farsa	98	76.411	ENSAOCG00000000581	farsa	99	76.411	Amphiprion_ocellaris
ENSMUSG00000003808	Farsa	98	76.210	ENSAPEG00000017695	farsa	99	76.210	Amphiprion_percula
ENSMUSG00000003808	Farsa	98	69.960	ENSATEG00000012807	farsa	99	69.960	Anabas_testudineus
ENSMUSG00000003808	Farsa	98	63.783	ENSATEG00000012633	farsa	99	63.783	Anabas_testudineus
ENSMUSG00000003808	Farsa	96	80.527	ENSACAG00000017166	FARSA	81	80.833	Anolis_carolinensis
ENSMUSG00000003808	Farsa	100	92.126	ENSANAG00000037420	FARSA	100	92.126	Aotus_nancymaae
ENSMUSG00000003808	Farsa	98	77.218	ENSACLG00000001716	farsa	99	77.218	Astatotilapia_calliptera
ENSMUSG00000003808	Farsa	98	78.629	ENSAMXG00000037912	farsa	99	78.629	Astyanax_mexicanus
ENSMUSG00000003808	Farsa	100	91.339	ENSBTAG00000021374	FARSA	100	91.339	Bos_taurus
ENSMUSG00000003808	Farsa	94	61.263	WBGene00001497	fars-1	95	61.263	Caenorhabditis_elegans
ENSMUSG00000003808	Farsa	99	90.927	ENSCJAG00000004686	FARSA	100	86.024	Callithrix_jacchus
ENSMUSG00000003808	Farsa	100	91.339	ENSCAFG00000017096	FARSA	100	91.339	Canis_familiaris
ENSMUSG00000003808	Farsa	100	91.339	ENSCAFG00020005315	FARSA	100	91.339	Canis_lupus_dingo
ENSMUSG00000003808	Farsa	100	85.185	ENSCHIG00000022617	FARSA	100	85.185	Capra_hircus
ENSMUSG00000003808	Farsa	93	86.383	ENSTSYG00000002595	FARSA	85	86.383	Carlito_syrichta
ENSMUSG00000003808	Farsa	91	91.522	ENSCAPG00000011353	FARSA	98	91.721	Cavia_aperea
ENSMUSG00000003808	Farsa	100	91.732	ENSCPOG00000000787	FARSA	100	91.732	Cavia_porcellus
ENSMUSG00000003808	Farsa	100	91.929	ENSCCAG00000028176	FARSA	100	91.929	Cebus_capucinus
ENSMUSG00000003808	Farsa	100	91.339	ENSCLAG00000015489	FARSA	100	91.339	Chinchilla_lanigera
ENSMUSG00000003808	Farsa	94	93.711	ENSCSAG00000006530	FARSA	100	93.711	Chlorocebus_sabaeus
ENSMUSG00000003808	Farsa	94	81.381	ENSCPBG00000023915	FARSA	95	81.381	Chrysemys_picta_bellii
ENSMUSG00000003808	Farsa	98	61.847	ENSCING00000002567	-	96	63.674	Ciona_intestinalis
ENSMUSG00000003808	Farsa	98	62.450	ENSCSAVG00000010683	-	95	64.301	Ciona_savignyi
ENSMUSG00000003808	Farsa	100	92.717	ENSCANG00000043649	-	100	92.717	Colobus_angolensis_palliatus
ENSMUSG00000003808	Farsa	100	96.063	ENSCGRG00001019769	Farsa	100	96.063	Cricetulus_griseus_chok1gshd
ENSMUSG00000003808	Farsa	100	96.063	ENSCGRG00000013415	Farsa	100	96.063	Cricetulus_griseus_crigri
ENSMUSG00000003808	Farsa	98	77.218	ENSCSEG00000016214	farsa	96	77.218	Cynoglossus_semilaevis
ENSMUSG00000003808	Farsa	98	76.008	ENSCVAG00000007907	farsa	99	76.008	Cyprinodon_variegatus
ENSMUSG00000003808	Farsa	98	77.621	ENSDARG00000098825	farsa	99	77.621	Danio_rerio
ENSMUSG00000003808	Farsa	96	91.581	ENSDNOG00000032350	FARSA	99	91.581	Dasypus_novemcinctus
ENSMUSG00000003808	Farsa	100	91.159	ENSDORG00000010118	Farsa	100	91.159	Dipodomys_ordii
ENSMUSG00000003808	Farsa	96	62.805	FBgn0030007	alpha-PheRS	96	63.598	Drosophila_melanogaster
ENSMUSG00000003808	Farsa	100	82.283	ENSETEG00000018673	FARSA	100	82.283	Echinops_telfairi
ENSMUSG00000003808	Farsa	58	68.919	ENSEBUG00000008545	farsa	94	70.000	Eptatretus_burgeri
ENSMUSG00000003808	Farsa	91	81.132	ENSEASG00005004093	FARSA	95	81.132	Equus_asinus_asinus
ENSMUSG00000003808	Farsa	100	92.520	ENSECAG00000015139	FARSA	95	92.520	Equus_caballus
ENSMUSG00000003808	Farsa	98	77.016	ENSELUG00000010183	farsa	99	77.016	Esox_lucius
ENSMUSG00000003808	Farsa	100	91.732	ENSFCAG00000023511	FARSA	100	91.732	Felis_catus
ENSMUSG00000003808	Farsa	99	91.124	ENSFDAG00000005987	FARSA	100	91.124	Fukomys_damarensis
ENSMUSG00000003808	Farsa	98	77.419	ENSFHEG00000009382	farsa	94	77.419	Fundulus_heteroclitus
ENSMUSG00000003808	Farsa	98	75.654	ENSGMOG00000018319	farsa	99	75.654	Gadus_morhua
ENSMUSG00000003808	Farsa	97	75.152	ENSGALG00000040258	FARSA	84	75.992	Gallus_gallus
ENSMUSG00000003808	Farsa	98	77.419	ENSGAFG00000014146	farsa	99	77.419	Gambusia_affinis
ENSMUSG00000003808	Farsa	98	76.660	ENSGACG00000006278	farsa	99	76.660	Gasterosteus_aculeatus
ENSMUSG00000003808	Farsa	97	80.444	ENSGAGG00000000753	FARSA	95	81.172	Gopherus_agassizii
ENSMUSG00000003808	Farsa	99	92.702	ENSGGOG00000003418	FARSA	99	92.702	Gorilla_gorilla
ENSMUSG00000003808	Farsa	98	77.218	ENSHBUG00000019852	farsa	99	77.218	Haplochromis_burtoni
ENSMUSG00000003808	Farsa	99	91.865	ENSHGLG00000005213	FARSA	100	91.865	Heterocephalus_glaber_female
ENSMUSG00000003808	Farsa	99	91.865	ENSHGLG00100009586	FARSA	99	91.865	Heterocephalus_glaber_male
ENSMUSG00000003808	Farsa	98	76.008	ENSHCOG00000019548	farsa	99	76.008	Hippocampus_comes
ENSMUSG00000003808	Farsa	98	78.024	ENSIPUG00000007635	farsa	99	78.024	Ictalurus_punctatus
ENSMUSG00000003808	Farsa	99	91.321	ENSSTOG00000008748	FARSA	100	91.321	Ictidomys_tridecemlineatus
ENSMUSG00000003808	Farsa	98	77.419	ENSKMAG00000010698	farsa	99	77.419	Kryptolebias_marmoratus
ENSMUSG00000003808	Farsa	98	76.815	ENSLBEG00000006757	-	99	76.815	Labrus_bergylta
ENSMUSG00000003808	Farsa	84	73.647	ENSLBEG00000001258	farsa	97	73.647	Labrus_bergylta
ENSMUSG00000003808	Farsa	91	77.970	ENSLOCG00000008389	farsa	96	77.970	Lepisosteus_oculatus
ENSMUSG00000003808	Farsa	100	90.945	ENSLAFG00000016154	FARSA	100	90.945	Loxodonta_africana
ENSMUSG00000003808	Farsa	100	92.913	ENSMFAG00000030595	FARSA	100	92.913	Macaca_fascicularis
ENSMUSG00000003808	Farsa	100	92.913	ENSMMUG00000004390	FARSA	100	92.913	Macaca_mulatta
ENSMUSG00000003808	Farsa	100	92.913	ENSMNEG00000043866	FARSA	100	92.913	Macaca_nemestrina
ENSMUSG00000003808	Farsa	100	92.534	ENSMLEG00000029157	FARSA	100	92.534	Mandrillus_leucophaeus
ENSMUSG00000003808	Farsa	98	77.823	ENSMAMG00000010636	farsa	99	77.823	Mastacembelus_armatus
ENSMUSG00000003808	Farsa	98	77.218	ENSMZEG00005002319	farsa	99	77.218	Maylandia_zebra
ENSMUSG00000003808	Farsa	100	97.047	ENSMAUG00000009188	Farsa	100	97.047	Mesocricetus_auratus
ENSMUSG00000003808	Farsa	100	92.520	ENSMICG00000016272	FARSA	100	92.520	Microcebus_murinus
ENSMUSG00000003808	Farsa	100	96.850	ENSMOCG00000011399	Farsa	100	96.850	Microtus_ochrogaster
ENSMUSG00000003808	Farsa	98	73.589	ENSMMOG00000006287	farsa	99	73.589	Mola_mola
ENSMUSG00000003808	Farsa	98	85.685	ENSMODG00000011519	FARSA	100	85.685	Monodelphis_domestica
ENSMUSG00000003808	Farsa	98	73.790	ENSMALG00000001972	farsa	95	78.795	Monopterus_albus
ENSMUSG00000003808	Farsa	100	99.016	MGP_CAROLIEiJ_G0031312	Farsa	100	99.016	Mus_caroli
ENSMUSG00000003808	Farsa	100	98.425	MGP_PahariEiJ_G0022917	Farsa	100	98.425	Mus_pahari
ENSMUSG00000003808	Farsa	100	99.803	MGP_SPRETEiJ_G0032431	Farsa	100	99.803	Mus_spretus
ENSMUSG00000003808	Farsa	100	91.142	ENSMPUG00000004400	FARSA	100	91.142	Mustela_putorius_furo
ENSMUSG00000003808	Farsa	99	90.711	ENSMLUG00000012767	FARSA	99	90.711	Myotis_lucifugus
ENSMUSG00000003808	Farsa	73	95.935	ENSNGAG00000018353	Farsa	100	95.935	Nannospalax_galili
ENSMUSG00000003808	Farsa	98	77.621	ENSNBRG00000010063	farsa	99	77.621	Neolamprologus_brichardi
ENSMUSG00000003808	Farsa	100	91.732	ENSNLEG00000012899	FARSA	100	91.732	Nomascus_leucogenys
ENSMUSG00000003808	Farsa	98	84.879	ENSMEUG00000014253	FARSA	97	85.625	Notamacropus_eugenii
ENSMUSG00000003808	Farsa	100	91.142	ENSOPRG00000005004	FARSA	100	91.142	Ochotona_princeps
ENSMUSG00000003808	Farsa	100	91.535	ENSODEG00000010433	FARSA	100	91.535	Octodon_degus
ENSMUSG00000003808	Farsa	98	78.024	ENSONIG00000008075	farsa	99	78.024	Oreochromis_niloticus
ENSMUSG00000003808	Farsa	98	76.411	ENSORLG00000016406	farsa	90	76.411	Oryzias_latipes
ENSMUSG00000003808	Farsa	98	76.613	ENSORLG00020021978	farsa	99	76.613	Oryzias_latipes_hni
ENSMUSG00000003808	Farsa	98	76.613	ENSORLG00015015045	farsa	99	76.613	Oryzias_latipes_hsok
ENSMUSG00000003808	Farsa	98	76.411	ENSOMEG00000017367	farsa	97	76.411	Oryzias_melastigma
ENSMUSG00000003808	Farsa	100	91.732	ENSOGAG00000012243	FARSA	100	91.732	Otolemur_garnettii
ENSMUSG00000003808	Farsa	100	91.535	ENSOARG00000009991	FARSA	94	91.535	Ovis_aries
ENSMUSG00000003808	Farsa	100	92.717	ENSPPAG00000034266	FARSA	100	92.717	Pan_paniscus
ENSMUSG00000003808	Farsa	100	91.732	ENSPPRG00000000346	FARSA	100	91.732	Panthera_pardus
ENSMUSG00000003808	Farsa	93	92.553	ENSPTIG00000011502	FARSA	97	92.553	Panthera_tigris_altaica
ENSMUSG00000003808	Farsa	100	92.717	ENSPTRG00000010550	FARSA	100	92.717	Pan_troglodytes
ENSMUSG00000003808	Farsa	100	92.717	ENSPANG00000010978	FARSA	100	87.402	Papio_anubis
ENSMUSG00000003808	Farsa	98	75.605	ENSPKIG00000007170	farsa	99	77.016	Paramormyrops_kingsleyae
ENSMUSG00000003808	Farsa	88	76.116	ENSPSIG00000012701	FARSA	99	75.055	Pelodiscus_sinensis
ENSMUSG00000003808	Farsa	98	71.774	ENSPMGG00000001401	farsa	99	71.774	Periophthalmus_magnuspinnatus
ENSMUSG00000003808	Farsa	100	96.260	ENSPEMG00000012560	Farsa	100	96.260	Peromyscus_maniculatus_bairdii
ENSMUSG00000003808	Farsa	98	75.605	ENSPMAG00000008453	farsa	97	76.667	Petromyzon_marinus
ENSMUSG00000003808	Farsa	98	86.089	ENSPCIG00000019294	FARSA	99	86.089	Phascolarctos_cinereus
ENSMUSG00000003808	Farsa	98	77.419	ENSPFOG00000001201	farsa	99	77.419	Poecilia_formosa
ENSMUSG00000003808	Farsa	98	77.419	ENSPLAG00000018191	farsa	99	77.419	Poecilia_latipinna
ENSMUSG00000003808	Farsa	98	77.621	ENSPMEG00000013547	farsa	99	77.621	Poecilia_mexicana
ENSMUSG00000003808	Farsa	98	72.782	ENSPREG00000013620	farsa	99	72.782	Poecilia_reticulata
ENSMUSG00000003808	Farsa	100	92.913	ENSPPYG00000009615	FARSA	100	92.913	Pongo_abelii
ENSMUSG00000003808	Farsa	100	91.339	ENSPCAG00000015721	FARSA	100	91.339	Procavia_capensis
ENSMUSG00000003808	Farsa	100	92.520	ENSPCOG00000014412	FARSA	100	92.520	Propithecus_coquereli
ENSMUSG00000003808	Farsa	86	93.333	ENSPVAG00000014714	FARSA	86	93.333	Pteropus_vampyrus
ENSMUSG00000003808	Farsa	98	77.218	ENSPNYG00000002144	farsa	99	77.218	Pundamilia_nyererei
ENSMUSG00000003808	Farsa	98	78.427	ENSPNAG00000000869	farsa	99	78.427	Pygocentrus_nattereri
ENSMUSG00000003808	Farsa	100	98.622	ENSRNOG00000003149	Farsa	100	98.622	Rattus_norvegicus
ENSMUSG00000003808	Farsa	100	92.520	ENSRBIG00000025585	FARSA	100	92.520	Rhinopithecus_bieti
ENSMUSG00000003808	Farsa	100	92.520	ENSRROG00000040046	FARSA	100	87.205	Rhinopithecus_roxellana
ENSMUSG00000003808	Farsa	91	50.212	YFL022C	FRS2	93	50.212	Saccharomyces_cerevisiae
ENSMUSG00000003808	Farsa	100	92.126	ENSSBOG00000031362	FARSA	100	92.126	Saimiri_boliviensis_boliviensis
ENSMUSG00000003808	Farsa	88	85.906	ENSSHAG00000015006	FARSA	100	85.906	Sarcophilus_harrisii
ENSMUSG00000003808	Farsa	98	75.403	ENSSFOG00015014864	farsa	99	75.403	Scleropages_formosus
ENSMUSG00000003808	Farsa	98	76.815	ENSSMAG00000002358	farsa	99	76.815	Scophthalmus_maximus
ENSMUSG00000003808	Farsa	98	76.008	ENSSDUG00000008631	farsa	99	76.008	Seriola_dumerili
ENSMUSG00000003808	Farsa	98	76.008	ENSSLDG00000017108	farsa	99	76.008	Seriola_lalandi_dorsalis
ENSMUSG00000003808	Farsa	66	96.970	ENSSARG00000006579	-	70	89.320	Sorex_araneus
ENSMUSG00000003808	Farsa	88	67.038	ENSSPUG00000012509	FARSA	96	67.416	Sphenodon_punctatus
ENSMUSG00000003808	Farsa	98	77.016	ENSSPAG00000018292	farsa	92	77.016	Stegastes_partitus
ENSMUSG00000003808	Farsa	100	91.142	ENSSSCG00000013745	FARSA	100	91.142	Sus_scrofa
ENSMUSG00000003808	Farsa	98	66.869	ENSTRUG00000010624	farsa	99	66.869	Takifugu_rubripes
ENSMUSG00000003808	Farsa	98	71.371	ENSTNIG00000008330	farsa	99	71.371	Tetraodon_nigroviridis
ENSMUSG00000003808	Farsa	90	88.017	ENSTBEG00000000396	FARSA	100	88.017	Tupaia_belangeri
ENSMUSG00000003808	Farsa	87	89.950	ENSTTRG00000003599	FARSA	87	89.950	Tursiops_truncatus
ENSMUSG00000003808	Farsa	99	90.927	ENSUAMG00000010230	FARSA	99	90.927	Ursus_americanus
ENSMUSG00000003808	Farsa	99	90.730	ENSUMAG00000006110	FARSA	99	90.730	Ursus_maritimus
ENSMUSG00000003808	Farsa	100	91.339	ENSVVUG00000024145	FARSA	100	91.339	Vulpes_vulpes
ENSMUSG00000003808	Farsa	98	76.152	ENSXETG00000007936	farsa	96	77.149	Xenopus_tropicalis
ENSMUSG00000003808	Farsa	98	69.014	ENSXCOG00000015512	farsa	99	69.014	Xiphophorus_couchianus
ENSMUSG00000003808	Farsa	98	76.210	ENSXMAG00000008832	farsa	99	76.210	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	-	IEA	Function
GO:0000166	nucleotide binding	-	IEA	Function
GO:0004812	aminoacyl-tRNA ligase activity	-	IEA	Function
GO:0004826	phenylalanine-tRNA ligase activity	21873635.	IBA	Function
GO:0004826	phenylalanine-tRNA ligase activity	-	ISO	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0006412	translation	-	IEA	Process
GO:0006432	phenylalanyl-tRNA aminoacylation	21873635.	IBA	Process
GO:0006432	phenylalanyl-tRNA aminoacylation	-	ISO	Process
GO:0009328	phenylalanine-tRNA ligase complex	21873635.	IBA	Component
GO:0009328	phenylalanine-tRNA ligase complex	-	ISO	Component
GO:0016874	ligase activity	-	IEA	Function
GO:0043039	tRNA aminoacylation	-	IEA	Process
GO:0051290	protein heterotetramerization	-	ISO	Process