EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000004085 (Gene tree)
Gene ID: 65964
Gene Symbol: Map3k20
Alias: B230120H23Rik|MLTKalpha|MLTKbeta|Zak
Full Name: mitogen-activated protein kinase kinase kinase 20
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 156974
Position: chr2: 72285637-72442610
Accession: 2443258
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000135469	-	6663	-	ENSMUSP00000118983	454 (aa)	-	Q9ESL4
ENSMUST00000112073	-	1925	-	-	- (aa)	-	-
ENSMUST00000135204	-	559	-	-	- (aa)	-	-
ENSMUST00000144111	-	396	-	ENSMUSP00000119340	74 (aa)	-	A2ASW6
ENSMUST00000150126	-	1227	-	-	- (aa)	-	-
ENSMUST00000090824	-	3334	XM_006499997	ENSMUSP00000088334	802 (aa)	XP_006500060	Q9ESL4

Gene Model

Click here to download ENSMUSG00000004085's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04010	MAPK signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000004085's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000004085	Map3k20	100	100.000	ENSG00000091436	MAP3K20	100	99.275	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000077	DNA damage checkpoint	-	ISO	Process
GO:0000165	MAPK cascade	21873635.	IBA	Process
GO:0000166	nucleotide binding	-	IEA	Function
GO:0000287	magnesium ion binding	11042189.	IDA	Function
GO:0000287	magnesium ion binding	-	ISO	Function
GO:0004672	protein kinase activity	-	IEA	Function
GO:0004674	protein serine/threonine kinase activity	21873635.	IBA	Function
GO:0004674	protein serine/threonine kinase activity	11042189.	IDA	Function
GO:0004674	protein serine/threonine kinase activity	-	ISO	Function
GO:0004709	MAP kinase kinase kinase activity	21873635.	IBA	Function
GO:0004709	MAP kinase kinase kinase activity	11042189.	IDA	Function
GO:0004709	MAP kinase kinase kinase activity	-	ISO	Function
GO:0005524	ATP binding	11042189.	IDA	Function
GO:0005524	ATP binding	-	ISO	Function
GO:0005634	nucleus	11042189.	IDA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	11042189.	IDA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006468	protein phosphorylation	11042189.	IDA	Process
GO:0006468	protein phosphorylation	-	ISO	Process
GO:0007010	cytoskeleton organization	11042189.	IDA	Process
GO:0007049	cell cycle	-	IEA	Process
GO:0007050	cell cycle arrest	-	ISO	Process
GO:0007093	mitotic cell cycle checkpoint	-	ISO	Process
GO:0007257	activation of JUN kinase activity	-	ISO	Process
GO:0016301	kinase activity	-	IEA	Function
GO:0016310	phosphorylation	-	IEA	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0035556	intracellular signal transduction	11042189.	IDA	Process
GO:0042733	embryonic digit morphogenesis	26755636.	IMP	Process
GO:0042733	embryonic digit morphogenesis	-	ISO	Process
GO:0043065	positive regulation of apoptotic process	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0051403	stress-activated MAPK cascade	-	ISO	Process
GO:0060173	limb development	7957077.26755636.	IMP	Process
GO:0060173	limb development	-	ISO	Process
GO:0071480	cellular response to gamma radiation	-	ISO	Process