EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000004096 (Gene tree)
Gene ID
66070
Gene Symbol
Cwc15
Alias
0610040D20Rik|2900052N06Rik
Full Name
CWC15 spliceosome-associated protein
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Plus strand
Length
9961 bases
Position
chr9:14500617-14510577
Accession
1913320
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000004200Cwf_Cwc_15PF04889.123.3e-7611
ENSMUSP00000149476Cwf_Cwc_15PF04889.123.3e-7611
ENSMUSP00000151148Cwf_Cwc_15PF04889.122e-2311
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27768875High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem CellsnIC & mESC2016.09He CDOI: 10.1016/j.molcel.2016.09.034
27452465The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart DiseaseRBDmap & HL_12016 Jul 21Liao YDOI: 10.1016/j.celrep.2016.06.084
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000213913-831-ENSMUSP00000149476229 (aa)-Q9JHS9
ENSMUST00000216619-526--- (aa)--
ENSMUST00000004200-1111XM_006510537ENSMUSP00000004200229 (aa)XP_006510600Q9JHS9
ENSMUST00000215143-662-ENSMUSP0000015114879 (aa)-A0A1L1SVD8
Gene Model
Click here to download ENSMUSG00000004096's gene model file
Pathways
Pathway IDPathway NameSource
mmu03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000004096's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000004096Cwc1510099.127ENSG00000150316CWC1510099.127Homo_sapiens
ENSMUSG00000004096Cwc159989.744ENSAPOG00000003107cwc159483.264Acanthochromis_polyacanthus
ENSMUSG00000004096Cwc1510098.734ENSAMEG00000011392CWC1510097.835Ailuropoda_melanoleuca
ENSMUSG00000004096Cwc159989.744ENSACIG00000015258cwc1510083.193Amphilophus_citrinellus
ENSMUSG00000004096Cwc159989.744ENSAOCG00000010738cwc1510083.682Amphiprion_ocellaris
ENSMUSG00000004096Cwc159989.744ENSAPEG00000004563cwc1510083.682Amphiprion_percula
ENSMUSG00000004096Cwc159989.744ENSATEG00000013290cwc1510083.682Anabas_testudineus
ENSMUSG00000004096Cwc1510097.468ENSAPLG00000003221CWC1510095.652Anas_platyrhynchos
ENSMUSG00000004096Cwc1510094.937ENSACAG00000013987CWC159492.857Anolis_carolinensis
ENSMUSG00000004096Cwc1510099.127ENSANAG00000020484CWC1510099.127Aotus_nancymaae
ENSMUSG00000004096Cwc159988.462ENSACLG00000012474cwc1510082.700Astatotilapia_calliptera
ENSMUSG00000004096Cwc159686.842ENSAMXG00000007538cwc1510078.099Astyanax_mexicanus
ENSMUSG00000004096Cwc1510098.734ENSBTAG00000007913CWC1510098.268Bos_taurus
ENSMUSG00000004096Cwc1510061.111WBGene00011687cwc-1510061.111Caenorhabditis_elegans
ENSMUSG00000004096Cwc1510099.127ENSCJAG00000040352CWC1510099.127Callithrix_jacchus
ENSMUSG00000004096Cwc1510095.238ENSCAFG00000005959-10095.238Canis_familiaris
ENSMUSG00000004096Cwc1510098.734ENSCAFG00000004134CWC1510098.268Canis_familiaris
ENSMUSG00000004096Cwc1510098.734ENSCAFG00020016515CWC1510098.696Canis_lupus_dingo
ENSMUSG00000004096Cwc1510098.734ENSCHIG00000013423CWC1510098.268Capra_hircus
ENSMUSG00000004096Cwc1510098.734ENSTSYG00000000407-10097.826Carlito_syrichta
ENSMUSG00000004096Cwc1510099.127ENSTSYG00000010873-10099.127Carlito_syrichta
ENSMUSG00000004096Cwc1510064.192ENSCAPG00000017015CWC1510064.192Cavia_aperea
ENSMUSG00000004096Cwc1510099.127ENSCPOG00000006249CWC1510099.127Cavia_porcellus
ENSMUSG00000004096Cwc1510099.127ENSCCAG00000026289CWC1510099.127Cebus_capucinus
ENSMUSG00000004096Cwc1510099.127ENSCATG00000030235CWC1510099.127Cercocebus_atys
ENSMUSG00000004096Cwc1510098.734ENSCLAG00000000129CWC1510098.690Chinchilla_lanigera
ENSMUSG00000004096Cwc1510099.127ENSCSAG00000003299CWC1510099.127Chlorocebus_sabaeus
ENSMUSG00000004096Cwc1510096.203ENSCPBG00000024037CWC1510094.348Chrysemys_picta_bellii
ENSMUSG00000004096Cwc1510058.952ENSCING00000012768-10058.952Ciona_intestinalis
ENSMUSG00000004096Cwc1510059.389ENSCSAVG00000003476-10059.825Ciona_savignyi
ENSMUSG00000004096Cwc1510099.127ENSCANG00000028070CWC1510099.127Colobus_angolensis_palliatus
ENSMUSG00000004096Cwc1510099.563ENSCGRG00001013337Cwc1510099.563Cricetulus_griseus_chok1gshd
ENSMUSG00000004096Cwc1510099.563ENSCGRG00000015359Cwc1510099.563Cricetulus_griseus_crigri
ENSMUSG00000004096Cwc159987.179ENSCSEG00000018582cwc159479.592Cynoglossus_semilaevis
ENSMUSG00000004096Cwc159988.462ENSCVAG00000014417cwc1510083.193Cyprinodon_variegatus
ENSMUSG00000004096Cwc159688.158ENSDARG00000013382cwc1510078.455Danio_rerio
ENSMUSG00000004096Cwc1510098.734ENSDNOG00000041326CWC1510098.268Dasypus_novemcinctus
ENSMUSG00000004096Cwc158672.139ENSDNOG00000046295-10072.637Dasypus_novemcinctus
ENSMUSG00000004096Cwc1510098.734ENSDORG00000011075Cwc1510097.817Dipodomys_ordii
ENSMUSG00000004096Cwc157576.271FBgn0040235c12.110050.183Drosophila_melanogaster
ENSMUSG00000004096Cwc1510089.873ENSETEG00000010889-9982.877Echinops_telfairi
ENSMUSG00000004096Cwc1510097.468ENSETEG00000006649-10097.315Echinops_telfairi
ENSMUSG00000004096Cwc159979.487ENSEBUG00000013107cwc1510065.502Eptatretus_burgeri
ENSMUSG00000004096Cwc1510098.734ENSEASG00005011279CWC1510097.835Equus_asinus_asinus
ENSMUSG00000004096Cwc1510098.734ENSECAG00000013314CWC1510097.835Equus_caballus
ENSMUSG00000004096Cwc1510096.970ENSEEUG00000002124CWC1510096.970Erinaceus_europaeus
ENSMUSG00000004096Cwc159989.744ENSELUG00000008086cwc1510080.579Esox_lucius
ENSMUSG00000004096Cwc1510098.734ENSFCAG00000007826-10098.690Felis_catus
ENSMUSG00000004096Cwc1510094.937ENSFCAG00000045160-8895.556Felis_catus
ENSMUSG00000004096Cwc1510097.468ENSFALG00000000326CWC1510095.652Ficedula_albicollis
ENSMUSG00000004096Cwc1510098.734ENSFDAG00000014629CWC1510098.690Fukomys_damarensis
ENSMUSG00000004096Cwc159987.179ENSFHEG00000002105cwc1510081.590Fundulus_heteroclitus
ENSMUSG00000004096Cwc1510063.830ENSGMOG00000016146cwc1510066.383Gadus_morhua
ENSMUSG00000004096Cwc1510096.203ENSGALG00000017207CWC1510095.217Gallus_gallus
ENSMUSG00000004096Cwc159988.462ENSGAFG00000005721cwc1510082.353Gambusia_affinis
ENSMUSG00000004096Cwc159985.185ENSGACG00000020374cwc1510080.591Gasterosteus_aculeatus
ENSMUSG00000004096Cwc1510096.203ENSGAGG00000024008CWC159993.913Gopherus_agassizii
ENSMUSG00000004096Cwc1510099.127ENSGGOG00000011926CWC1510099.127Gorilla_gorilla
ENSMUSG00000004096Cwc159988.462ENSHBUG00000003341cwc1510083.051Haplochromis_burtoni
ENSMUSG00000004096Cwc1510099.127ENSHGLG00000006521CWC1510099.127Heterocephalus_glaber_female
ENSMUSG00000004096Cwc158994.286ENSHGLG00000003773-10080.263Heterocephalus_glaber_female
ENSMUSG00000004096Cwc1510098.734ENSHGLG00100007904-10095.197Heterocephalus_glaber_male
ENSMUSG00000004096Cwc159993.590ENSHGLG00100003268-10077.293Heterocephalus_glaber_male
ENSMUSG00000004096Cwc159988.462ENSHCOG00000006089cwc1510077.959Hippocampus_comes
ENSMUSG00000004096Cwc1510099.127ENSSTOG00000002485CWC1510099.127Ictidomys_tridecemlineatus
ENSMUSG00000004096Cwc1510097.468ENSJJAG00000012773-10096.507Jaculus_jaculus
ENSMUSG00000004096Cwc1510098.734ENSJJAG00000016968-10081.106Jaculus_jaculus
ENSMUSG00000004096Cwc159997.436ENSJJAG00000012940-10096.070Jaculus_jaculus
ENSMUSG00000004096Cwc159989.744ENSKMAG00000011877cwc1510082.627Kryptolebias_marmoratus
ENSMUSG00000004096Cwc159988.462ENSLBEG00000026116cwc1510081.481Labrus_bergylta
ENSMUSG00000004096Cwc1510093.671ENSLACG00000012239CWC1510087.124Latimeria_chalumnae
ENSMUSG00000004096Cwc1510089.873ENSLOCG00000007570cwc1510084.615Lepisosteus_oculatus
ENSMUSG00000004096Cwc1510098.734ENSLAFG00000004456CWC1510098.268Loxodonta_africana
ENSMUSG00000004096Cwc1510099.127ENSMFAG00000044052CWC1510099.127Macaca_fascicularis
ENSMUSG00000004096Cwc1510099.127ENSMMUG00000044962CWC1510099.127Macaca_mulatta
ENSMUSG00000004096Cwc1510099.127ENSMNEG00000033968CWC1510099.127Macaca_nemestrina
ENSMUSG00000004096Cwc1510099.127ENSMLEG00000035668CWC1510099.127Mandrillus_leucophaeus
ENSMUSG00000004096Cwc159989.744ENSMAMG00000013540cwc1510083.966Mastacembelus_armatus
ENSMUSG00000004096Cwc159988.462ENSMZEG00005015901cwc1510082.700Maylandia_zebra
ENSMUSG00000004096Cwc1510096.203ENSMGAG00000015193CWC1510095.217Meleagris_gallopavo
ENSMUSG00000004096Cwc1510098.690ENSMAUG00000011686Cwc1510098.690Mesocricetus_auratus
ENSMUSG00000004096Cwc1510099.127ENSMICG00000042790CWC1510099.127Microcebus_murinus
ENSMUSG00000004096Cwc1510099.127ENSMOCG00000016094Cwc1510099.127Microtus_ochrogaster
ENSMUSG00000004096Cwc159988.462ENSMMOG00000016343cwc1510079.828Mola_mola
ENSMUSG00000004096Cwc1510086.076ENSMODG00000003709-10068.996Monodelphis_domestica
ENSMUSG00000004096Cwc1510097.468ENSMODG00000000169-9696.507Monodelphis_domestica
ENSMUSG00000004096Cwc159988.462ENSMALG00000019325cwc1510076.371Monopterus_albus
ENSMUSG00000004096Cwc15100100.000MGP_CAROLIEiJ_G0031782Cwc15100100.000Mus_caroli
ENSMUSG00000004096Cwc15100100.000MGP_PahariEiJ_G0014658Cwc15100100.000Mus_pahari
ENSMUSG00000004096Cwc15100100.000MGP_SPRETEiJ_G0032902Cwc1510099.563Mus_spretus
ENSMUSG00000004096Cwc1510098.734ENSMPUG00000012265CWC1510098.268Mustela_putorius_furo
ENSMUSG00000004096Cwc1510097.835ENSMLUG00000002032-10097.835Myotis_lucifugus
ENSMUSG00000004096Cwc1510095.671ENSMLUG00000026676-10095.671Myotis_lucifugus
ENSMUSG00000004096Cwc1510099.127ENSNGAG00000016450Cwc1510099.127Nannospalax_galili
ENSMUSG00000004096Cwc159988.462ENSNBRG00000018245cwc1510082.700Neolamprologus_brichardi
ENSMUSG00000004096Cwc1510099.127ENSNLEG00000031455CWC1510099.127Nomascus_leucogenys
ENSMUSG00000004096Cwc1510097.817ENSOPRG00000001706-10097.817Ochotona_princeps
ENSMUSG00000004096Cwc1510097.817ENSODEG00000020310-10097.817Octodon_degus
ENSMUSG00000004096Cwc1510075.109ENSODEG00000009713-10074.236Octodon_degus
ENSMUSG00000004096Cwc159797.403ENSODEG00000002251-10088.646Octodon_degus
ENSMUSG00000004096Cwc1510099.127ENSODEG00000014060-10099.127Octodon_degus
ENSMUSG00000004096Cwc1510082.533ENSODEG00000008155-10082.533Octodon_degus
ENSMUSG00000004096Cwc159989.744ENSONIG00000004326cwc1510082.700Oreochromis_niloticus
ENSMUSG00000004096Cwc1510086.076ENSOANG00000001673-10077.293Ornithorhynchus_anatinus
ENSMUSG00000004096Cwc1510096.203ENSOANG00000010404-10094.372Ornithorhynchus_anatinus
ENSMUSG00000004096Cwc1510099.127ENSOCUG00000001629CWC1510099.127Oryctolagus_cuniculus
ENSMUSG00000004096Cwc159988.462ENSORLG00000008550cwc158579.592Oryzias_latipes
ENSMUSG00000004096Cwc159988.462ENSORLG00020002475cwc158579.918Oryzias_latipes_hni
ENSMUSG00000004096Cwc159988.462ENSORLG00015007291cwc158580.247Oryzias_latipes_hsok
ENSMUSG00000004096Cwc159988.462ENSOMEG00000000650cwc1510080.247Oryzias_melastigma
ENSMUSG00000004096Cwc1510099.127ENSOGAG00000001686CWC1510099.127Otolemur_garnettii
ENSMUSG00000004096Cwc1510098.734ENSOARG00000009316-10098.268Ovis_aries
ENSMUSG00000004096Cwc159169.231ENSOARG00000016298-10071.770Ovis_aries
ENSMUSG00000004096Cwc1510099.127ENSPPAG00000033609CWC1510099.127Pan_paniscus
ENSMUSG00000004096Cwc1510098.734ENSPPRG00000005063-10098.690Panthera_pardus
ENSMUSG00000004096Cwc1510093.671ENSPPRG00000015290-10094.372Panthera_pardus
ENSMUSG00000004096Cwc1510093.671ENSPTIG00000006844-8895.349Panthera_tigris_altaica
ENSMUSG00000004096Cwc1510098.734ENSPTIG00000021149-10069.869Panthera_tigris_altaica
ENSMUSG00000004096Cwc1510099.127ENSPTRG00000044239CWC1510099.127Pan_troglodytes
ENSMUSG00000004096Cwc1510099.127ENSPANG00000019125CWC1510099.127Papio_anubis
ENSMUSG00000004096Cwc159988.462ENSPKIG00000020021cwc1510084.615Paramormyrops_kingsleyae
ENSMUSG00000004096Cwc1510096.203ENSPSIG00000011569CWC1510093.913Pelodiscus_sinensis
ENSMUSG00000004096Cwc159989.744ENSPMGG00000002740cwc1510067.672Periophthalmus_magnuspinnatus
ENSMUSG00000004096Cwc1510099.563ENSPEMG00000021432Cwc1510099.563Peromyscus_maniculatus_bairdii
ENSMUSG00000004096Cwc156472.667ENSPMAG00000007890cwc159972.000Petromyzon_marinus
ENSMUSG00000004096Cwc1510097.468ENSPCIG00000001348CWC1510096.537Phascolarctos_cinereus
ENSMUSG00000004096Cwc159988.462ENSPFOG00000002621cwc1510082.353Poecilia_formosa
ENSMUSG00000004096Cwc159988.462ENSPLAG00000022639cwc1510082.353Poecilia_latipinna
ENSMUSG00000004096Cwc159988.462ENSPMEG00000001332cwc1510082.353Poecilia_mexicana
ENSMUSG00000004096Cwc159989.744ENSPREG00000021919cwc1510081.933Poecilia_reticulata
ENSMUSG00000004096Cwc1510099.127ENSPPYG00000003785CWC1510099.127Pongo_abelii
ENSMUSG00000004096Cwc1510081.818ENSPCAG00000004205CWC1510081.818Procavia_capensis
ENSMUSG00000004096Cwc1510099.127ENSPCOG00000023913CWC1510099.127Propithecus_coquereli
ENSMUSG00000004096Cwc1510098.734ENSPVAG00000017517CWC1510098.268Pteropus_vampyrus
ENSMUSG00000004096Cwc159988.462ENSPNYG00000019347cwc1510082.700Pundamilia_nyererei
ENSMUSG00000004096Cwc159688.158ENSPNAG00000022563cwc157984.348Pygocentrus_nattereri
ENSMUSG00000004096Cwc1510099.563ENSRNOG00000008490Cwc1510099.563Rattus_norvegicus
ENSMUSG00000004096Cwc1510094.323ENSRNOG00000025157AABR07008904.110094.323Rattus_norvegicus
ENSMUSG00000004096Cwc1510099.127ENSRBIG00000030781CWC1510099.127Rhinopithecus_bieti
ENSMUSG00000004096Cwc1510099.127ENSRROG00000037199CWC1510099.127Rhinopithecus_roxellana
ENSMUSG00000004096Cwc159975.439ENSSBOG00000033926-9971.053Saimiri_boliviensis_boliviensis
ENSMUSG00000004096Cwc1510099.127ENSSBOG00000006158-10099.127Saimiri_boliviensis_boliviensis
ENSMUSG00000004096Cwc1510085.185ENSSBOG00000035727-10080.519Saimiri_boliviensis_boliviensis
ENSMUSG00000004096Cwc1510091.139ENSSHAG00000000335-10088.210Sarcophilus_harrisii
ENSMUSG00000004096Cwc1510097.468ENSSHAG00000016534-10096.970Sarcophilus_harrisii
ENSMUSG00000004096Cwc159989.744ENSSFOG00015011833cwc1510085.470Scleropages_formosus
ENSMUSG00000004096Cwc159989.744ENSSMAG00000016275cwc1510082.845Scophthalmus_maximus
ENSMUSG00000004096Cwc159991.026ENSSDUG00000012642cwc1510080.242Seriola_dumerili
ENSMUSG00000004096Cwc159991.026ENSSLDG00000016292cwc1510079.920Seriola_lalandi_dorsalis
ENSMUSG00000004096Cwc159950.442ENSSARG00000004113-9947.788Sorex_araneus
ENSMUSG00000004096Cwc159276.415ENSSPUG00000004441CWC159976.887Sphenodon_punctatus
ENSMUSG00000004096Cwc159989.744ENSSPAG00000004630cwc1510083.264Stegastes_partitus
ENSMUSG00000004096Cwc1510098.734ENSSSCG00000014961CWC1510097.835Sus_scrofa
ENSMUSG00000004096Cwc1510097.468ENSTGUG00000012817CWC1510095.652Taeniopygia_guttata
ENSMUSG00000004096Cwc159991.026ENSTRUG00000015508cwc1510077.178Takifugu_rubripes
ENSMUSG00000004096Cwc159986.420ENSTNIG00000011790cwc1510078.903Tetraodon_nigroviridis
ENSMUSG00000004096Cwc1510093.671ENSTBEG00000014319CWC156793.827Tupaia_belangeri
ENSMUSG00000004096Cwc1510098.734ENSTTRG00000004922CWC1510083.406Tursiops_truncatus
ENSMUSG00000004096Cwc1510098.734ENSUAMG00000026040CWC1510098.696Ursus_americanus
ENSMUSG00000004096Cwc1510098.734ENSUMAG00000007161CWC1510098.268Ursus_maritimus
ENSMUSG00000004096Cwc1510098.734ENSVPAG00000005841CWC1510097.835Vicugna_pacos
ENSMUSG00000004096Cwc1510093.671ENSVVUG00000012624-10093.939Vulpes_vulpes
ENSMUSG00000004096Cwc1510098.734ENSVVUG00000011648-10096.087Vulpes_vulpes
ENSMUSG00000004096Cwc1510092.405ENSXETG00000007076cwc1510089.083Xenopus_tropicalis
ENSMUSG00000004096Cwc159988.462ENSXCOG00000006310cwc1510082.353Xiphophorus_couchianus
ENSMUSG00000004096Cwc159988.462ENSXMAG00000011472cwc1510082.353Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000398mRNA splicing, via spliceosome-ISOProcess
GO:0003723RNA binding21873635.IBAFunction
GO:0005634nucleus-ISOComponent
GO:0005681spliceosomal complex-ISOComponent
GO:0005739mitochondrion-ISOComponent
GO:0006397mRNA processing-IEAProcess
GO:0008380RNA splicing-IEAProcess
GO:0016607nuclear speck-ISOComponent
GO:0045292mRNA cis splicing, via spliceosome21873635.IBAProcess
GO:0071007U2-type catalytic step 2 spliceosome-ISOComponent
GO:0071013catalytic step 2 spliceosome21873635.IBAComponent
GO:0071013catalytic step 2 spliceosome-ISOComponent

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