EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000004100 (Gene tree)
Gene ID: 235036
Gene Symbol: Ppan
Alias: A230087P06Rik|SSF1
Full Name: peter pan homolog
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 4004 bases
Position: chr9:20888175-20892178
Accession: 2178445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000004203	Brix	PF04427.18	6.3e-45	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000135608	-	1157	-	-	- (aa)	-	-
ENSMUST00000004203	-	1670	-	ENSMUSP00000004203	470 (aa)	-	Q91YU8
ENSMUST00000153227	-	528	-	-	- (aa)	-	-
ENSMUST00000145231	-	3914	-	-	- (aa)	-	-
ENSMUST00000214331	-	787	-	ENSMUSP00000149658	193 (aa)	-	A0A1L1SRW3
ENSMUST00000157047	-	656	-	-	- (aa)	-	-
ENSMUST00000147780	-	1834	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000004100's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000004100's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000004100	Ppan	88	88.824	ENSG00000130810	PPAN	99	89.952	Homo_sapiens
ENSMUSG00000004100	Ppan	88	88.824	ENSG00000243207	PPAN-P2RY11	87	76.688	Homo_sapiens
ENSMUSG00000004100	Ppan	89	64.327	ENSAPOG00000017687	ppan	79	61.628	Acanthochromis_polyacanthus
ENSMUSG00000004100	Ppan	99	83.369	ENSAMEG00000011989	-	98	83.369	Ailuropoda_melanoleuca
ENSMUSG00000004100	Ppan	96	58.628	ENSACIG00000007417	ppan	77	62.195	Amphilophus_citrinellus
ENSMUSG00000004100	Ppan	96	59.227	ENSAOCG00000005416	ppan	87	59.227	Amphiprion_ocellaris
ENSMUSG00000004100	Ppan	96	58.584	ENSAPEG00000010382	ppan	79	61.860	Amphiprion_percula
ENSMUSG00000004100	Ppan	88	64.706	ENSATEG00000021221	ppan	78	63.814	Anabas_testudineus
ENSMUSG00000004100	Ppan	88	68.824	ENSACAG00000003838	-	78	66.667	Anolis_carolinensis
ENSMUSG00000004100	Ppan	88	82.353	ENSANAG00000038012	-	98	76.455	Aotus_nancymaae
ENSMUSG00000004100	Ppan	88	87.647	ENSANAG00000020371	-	100	72.805	Aotus_nancymaae
ENSMUSG00000004100	Ppan	100	55.556	ENSACLG00000019215	ppan	93	55.556	Astatotilapia_calliptera
ENSMUSG00000004100	Ppan	89	63.158	ENSAMXG00000032540	ppan	75	59.466	Astyanax_mexicanus
ENSMUSG00000004100	Ppan	97	81.681	ENSBTAG00000012745	PPAN	99	81.681	Bos_taurus
ENSMUSG00000004100	Ppan	83	41.104	WBGene00003062	lpd-6	72	36.768	Caenorhabditis_elegans
ENSMUSG00000004100	Ppan	88	87.647	ENSCJAG00000039296	PPAN	97	72.985	Callithrix_jacchus
ENSMUSG00000004100	Ppan	93	86.270	ENSCAFG00000017917	P2RY11	78	86.270	Canis_familiaris
ENSMUSG00000004100	Ppan	96	84.768	ENSCAFG00020023621	-	98	83.405	Canis_lupus_dingo
ENSMUSG00000004100	Ppan	97	82.112	ENSCHIG00000006450	-	99	82.112	Capra_hircus
ENSMUSG00000004100	Ppan	63	80.165	ENSTSYG00000034845	-	89	89.697	Carlito_syrichta
ENSMUSG00000004100	Ppan	88	89.412	ENSCPOG00000025539	-	99	80.965	Cavia_porcellus
ENSMUSG00000004100	Ppan	88	86.471	ENSCCAG00000032527	-	100	72.103	Cebus_capucinus
ENSMUSG00000004100	Ppan	88	89.412	ENSCATG00000040554	-	91	78.947	Cercocebus_atys
ENSMUSG00000004100	Ppan	98	84.165	ENSCLAG00000009362	-	99	83.582	Chinchilla_lanigera
ENSMUSG00000004100	Ppan	88	89.412	ENSCSAG00000007423	-	97	75.594	Chlorocebus_sabaeus
ENSMUSG00000004100	Ppan	87	70.171	ENSCPBG00000005372	-	78	69.834	Chrysemys_picta_bellii
ENSMUSG00000004100	Ppan	88	45.561	ENSCING00000005420	ppan	86	46.506	Ciona_intestinalis
ENSMUSG00000004100	Ppan	91	44.170	ENSCSAVG00000005816	-	91	44.170	Ciona_savignyi
ENSMUSG00000004100	Ppan	79	77.005	ENSCANG00000036259	-	96	73.383	Colobus_angolensis_palliatus
ENSMUSG00000004100	Ppan	99	88.486	ENSCGRG00001015990	Ppan	99	88.486	Cricetulus_griseus_chok1gshd
ENSMUSG00000004100	Ppan	86	87.931	ENSCGRG00000012785	Ppan	99	87.931	Cricetulus_griseus_crigri
ENSMUSG00000004100	Ppan	88	66.471	ENSCSEG00000021023	ppan	72	65.250	Cynoglossus_semilaevis
ENSMUSG00000004100	Ppan	87	62.195	ENSCVAG00000013547	ppan	76	62.195	Cyprinodon_variegatus
ENSMUSG00000004100	Ppan	96	58.120	ENSDARG00000022232	ppan	89	58.120	Danio_rerio
ENSMUSG00000004100	Ppan	88	89.412	ENSDNOG00000047670	-	68	90.000	Dasypus_novemcinctus
ENSMUSG00000004100	Ppan	88	90.000	ENSDORG00000003829	Ppan	100	89.535	Dipodomys_ordii
ENSMUSG00000004100	Ppan	84	41.310	FBgn0010770	ppan	81	41.310	Drosophila_melanogaster
ENSMUSG00000004100	Ppan	88	86.471	ENSETEG00000019286	-	96	77.582	Echinops_telfairi
ENSMUSG00000004100	Ppan	82	58.861	ENSEBUG00000004335	ppan	61	63.492	Eptatretus_burgeri
ENSMUSG00000004100	Ppan	97	85.055	ENSEASG00005010574	-	96	85.055	Equus_asinus_asinus
ENSMUSG00000004100	Ppan	97	84.649	ENSECAG00000024469	-	96	84.649	Equus_caballus
ENSMUSG00000004100	Ppan	89	63.743	ENSELUG00000024160	ppan	78	61.446	Esox_lucius
ENSMUSG00000004100	Ppan	96	80.952	ENSFCAG00000009388	-	91	80.952	Felis_catus
ENSMUSG00000004100	Ppan	88	70.051	ENSFDAG00000008458	-	96	70.946	Fukomys_damarensis
ENSMUSG00000004100	Ppan	86	62.500	ENSFHEG00000001554	ppan	76	62.500	Fundulus_heteroclitus
ENSMUSG00000004100	Ppan	95	58.315	ENSGMOG00000003431	ppan	86	58.000	Gadus_morhua
ENSMUSG00000004100	Ppan	100	63.212	ENSGALG00000051597	-	95	63.212	Gallus_gallus
ENSMUSG00000004100	Ppan	88	62.130	ENSGAFG00000015832	ppan	76	62.712	Gambusia_affinis
ENSMUSG00000004100	Ppan	88	64.118	ENSGACG00000013723	ppan	86	58.022	Gasterosteus_aculeatus
ENSMUSG00000004100	Ppan	88	72.515	ENSGAGG00000009455	-	80	68.750	Gopherus_agassizii
ENSMUSG00000004100	Ppan	87	74.272	ENSGGOG00000039459	PPAN	96	74.272	Gorilla_gorilla
ENSMUSG00000004100	Ppan	93	58.537	ENSHBUG00000021830	ppan	85	58.537	Haplochromis_burtoni
ENSMUSG00000004100	Ppan	96	83.772	ENSHGLG00000006964	-	96	83.772	Heterocephalus_glaber_female
ENSMUSG00000004100	Ppan	96	83.772	ENSHGLG00100011618	-	96	83.772	Heterocephalus_glaber_male
ENSMUSG00000004100	Ppan	81	66.879	ENSHCOG00000016751	ppan	75	51.683	Hippocampus_comes
ENSMUSG00000004100	Ppan	85	70.303	ENSIPUG00000005082	ppan	73	65.542	Ictalurus_punctatus
ENSMUSG00000004100	Ppan	99	81.933	ENSSTOG00000010828	-	99	81.933	Ictidomys_tridecemlineatus
ENSMUSG00000004100	Ppan	97	85.777	ENSJJAG00000016362	Ppan	98	86.214	Jaculus_jaculus
ENSMUSG00000004100	Ppan	87	61.951	ENSKMAG00000016509	ppan	76	61.951	Kryptolebias_marmoratus
ENSMUSG00000004100	Ppan	88	64.706	ENSLBEG00000020897	ppan	94	63.409	Labrus_bergylta
ENSMUSG00000004100	Ppan	97	54.352	ENSLACG00000001451	ppan	99	54.352	Latimeria_chalumnae
ENSMUSG00000004100	Ppan	88	61.176	ENSLOCG00000007381	ppan	79	60.577	Lepisosteus_oculatus
ENSMUSG00000004100	Ppan	93	84.444	ENSLAFG00000016399	-	91	84.507	Loxodonta_africana
ENSMUSG00000004100	Ppan	88	89.412	ENSMFAG00000042854	-	97	75.594	Macaca_fascicularis
ENSMUSG00000004100	Ppan	88	89.412	ENSMMUG00000017211	PPAN	100	87.629	Macaca_mulatta
ENSMUSG00000004100	Ppan	88	89.412	ENSMNEG00000031363	-	97	75.484	Macaca_nemestrina
ENSMUSG00000004100	Ppan	88	89.412	ENSMLEG00000042991	-	97	75.054	Mandrillus_leucophaeus
ENSMUSG00000004100	Ppan	88	65.882	ENSMAMG00000012418	ppan	77	63.325	Mastacembelus_armatus
ENSMUSG00000004100	Ppan	100	55.556	ENSMZEG00005018872	ppan	98	61.654	Maylandia_zebra
ENSMUSG00000004100	Ppan	99	87.821	ENSMAUG00000000310	Ppan	99	87.821	Mesocricetus_auratus
ENSMUSG00000004100	Ppan	88	87.059	ENSMICG00000047321	-	91	82.670	Microcebus_murinus
ENSMUSG00000004100	Ppan	96	90.708	ENSMOCG00000016402	Ppan	97	90.708	Microtus_ochrogaster
ENSMUSG00000004100	Ppan	93	60.314	ENSMMOG00000011584	ppan	86	60.314	Mola_mola
ENSMUSG00000004100	Ppan	92	71.233	ENSMODG00000005158	PPAN	92	71.233	Monodelphis_domestica
ENSMUSG00000004100	Ppan	88	67.456	ENSMALG00000015931	ppan	76	65.356	Monopterus_albus
ENSMUSG00000004100	Ppan	100	98.298	MGP_CAROLIEiJ_G0031850	Ppan	100	98.298	Mus_caroli
ENSMUSG00000004100	Ppan	99	95.299	MGP_PahariEiJ_G0014716	Ppan	99	95.299	Mus_pahari
ENSMUSG00000004100	Ppan	100	99.787	MGP_SPRETEiJ_G0032974	Ppan	100	99.787	Mus_spretus
ENSMUSG00000004100	Ppan	99	84.698	ENSMPUG00000006866	-	98	84.698	Mustela_putorius_furo
ENSMUSG00000004100	Ppan	98	82.213	ENSMLUG00000014186	-	97	82.213	Myotis_lucifugus
ENSMUSG00000004100	Ppan	77	79.945	ENSNGAG00000012813	Ppan	98	79.945	Nannospalax_galili
ENSMUSG00000004100	Ppan	100	55.332	ENSNBRG00000008460	ppan	94	55.332	Neolamprologus_brichardi
ENSMUSG00000004100	Ppan	88	88.824	ENSNLEG00000012048	-	97	75.589	Nomascus_leucogenys
ENSMUSG00000004100	Ppan	92	69.863	ENSMEUG00000007968	-	96	69.863	Notamacropus_eugenii
ENSMUSG00000004100	Ppan	88	87.059	ENSOPRG00000006982	-	55	83.879	Ochotona_princeps
ENSMUSG00000004100	Ppan	99	81.876	ENSODEG00000016743	-	99	81.876	Octodon_degus
ENSMUSG00000004100	Ppan	88	62.941	ENSONIG00000001598	ppan	94	55.533	Oreochromis_niloticus
ENSMUSG00000004100	Ppan	89	71.262	ENSOANG00000006740	PPAN	87	71.262	Ornithorhynchus_anatinus
ENSMUSG00000004100	Ppan	99	58.085	ENSORLG00000005634	ppan	89	58.085	Oryzias_latipes
ENSMUSG00000004100	Ppan	99	58.085	ENSORLG00020003966	ppan	89	58.085	Oryzias_latipes_hni
ENSMUSG00000004100	Ppan	100	60.622	ENSORLG00015016869	ppan	97	60.622	Oryzias_latipes_hsok
ENSMUSG00000004100	Ppan	91	60.839	ENSOMEG00000023943	ppan	82	60.839	Oryzias_melastigma
ENSMUSG00000004100	Ppan	88	86.471	ENSOGAG00000014454	-	91	80.841	Otolemur_garnettii
ENSMUSG00000004100	Ppan	83	83.333	ENSOARG00000014981	-	83	83.333	Ovis_aries
ENSMUSG00000004100	Ppan	88	88.824	ENSPPAG00000039744	-	97	75.914	Pan_paniscus
ENSMUSG00000004100	Ppan	95	84.753	ENSPPRG00000023895	-	95	84.753	Panthera_pardus
ENSMUSG00000004100	Ppan	85	83.960	ENSPTIG00000015960	-	95	83.960	Panthera_tigris_altaica
ENSMUSG00000004100	Ppan	88	88.824	ENSPTRG00000010459	PPAN	97	75.699	Pan_troglodytes
ENSMUSG00000004100	Ppan	88	89.412	ENSPANG00000005948	-	91	78.947	Papio_anubis
ENSMUSG00000004100	Ppan	88	61.850	ENSPMGG00000001212	ppan	81	60.235	Periophthalmus_magnuspinnatus
ENSMUSG00000004100	Ppan	99	89.009	ENSPEMG00000015393	Ppan	99	89.009	Peromyscus_maniculatus_bairdii
ENSMUSG00000004100	Ppan	96	68.282	ENSPCIG00000018786	-	84	68.282	Phascolarctos_cinereus
ENSMUSG00000004100	Ppan	88	61.176	ENSPFOG00000005396	ppan	76	61.985	Poecilia_formosa
ENSMUSG00000004100	Ppan	88	61.765	ENSPLAG00000021445	ppan	76	61.985	Poecilia_latipinna
ENSMUSG00000004100	Ppan	88	61.538	ENSPMEG00000011625	ppan	76	62.228	Poecilia_mexicana
ENSMUSG00000004100	Ppan	88	61.765	ENSPREG00000006330	ppan	76	62.228	Poecilia_reticulata
ENSMUSG00000004100	Ppan	88	87.647	ENSPPYG00000009543	-	54	79.350	Pongo_abelii
ENSMUSG00000004100	Ppan	77	82.825	ENSPCAG00000007303	-	90	82.825	Procavia_capensis
ENSMUSG00000004100	Ppan	88	88.824	ENSPCOG00000027096	-	99	78.879	Propithecus_coquereli
ENSMUSG00000004100	Ppan	98	80.303	ENSPVAG00000003673	-	97	80.303	Pteropus_vampyrus
ENSMUSG00000004100	Ppan	100	55.556	ENSPNYG00000013872	ppan	93	55.556	Pundamilia_nyererei
ENSMUSG00000004100	Ppan	89	65.497	ENSPNAG00000017058	ppan	78	61.574	Pygocentrus_nattereri
ENSMUSG00000004100	Ppan	99	91.239	ENSRNOG00000020608	Ppan	99	91.239	Rattus_norvegicus
ENSMUSG00000004100	Ppan	88	88.824	ENSRBIG00000041320	-	97	75.378	Rhinopithecus_bieti
ENSMUSG00000004100	Ppan	88	88.824	ENSRROG00000038245	-	100	83.990	Rhinopithecus_roxellana
ENSMUSG00000004100	Ppan	88	88.824	ENSRROG00000034660	-	97	75.594	Rhinopithecus_roxellana
ENSMUSG00000004100	Ppan	84	38.418	YHR066W	-	99	33.333	Saccharomyces_cerevisiae
ENSMUSG00000004100	Ppan	85	38.462	YDR312W	-	99	34.341	Saccharomyces_cerevisiae
ENSMUSG00000004100	Ppan	88	87.647	ENSSBOG00000026246	-	100	72.318	Saimiri_boliviensis_boliviensis
ENSMUSG00000004100	Ppan	79	69.681	ENSSHAG00000009305	-	90	69.681	Sarcophilus_harrisii
ENSMUSG00000004100	Ppan	96	57.384	ENSSFOG00015023726	ppan	91	57.384	Scleropages_formosus
ENSMUSG00000004100	Ppan	88	64.118	ENSSMAG00000004098	ppan	80	61.163	Scophthalmus_maximus
ENSMUSG00000004100	Ppan	88	65.089	ENSSDUG00000021301	ppan	76	64.792	Seriola_dumerili
ENSMUSG00000004100	Ppan	88	65.089	ENSSLDG00000016106	ppan	77	64.548	Seriola_lalandi_dorsalis
ENSMUSG00000004100	Ppan	97	59.570	ENSSPAG00000000160	ppan	86	59.570	Stegastes_partitus
ENSMUSG00000004100	Ppan	98	82.863	ENSSSCG00000013662	PPAN	97	82.863	Sus_scrofa
ENSMUSG00000004100	Ppan	86	62.963	ENSTRUG00000007656	ppan	79	62.963	Takifugu_rubripes
ENSMUSG00000004100	Ppan	90	62.069	ENSTNIG00000018564	ppan	86	64.604	Tetraodon_nigroviridis
ENSMUSG00000004100	Ppan	88	88.235	ENSTBEG00000002721	-	64	88.430	Tupaia_belangeri
ENSMUSG00000004100	Ppan	88	89.412	ENSTTRG00000004530	-	99	75.589	Tursiops_truncatus
ENSMUSG00000004100	Ppan	66	74.219	ENSUAMG00000007239	-	93	84.889	Ursus_americanus
ENSMUSG00000004100	Ppan	96	84.768	ENSVVUG00000028309	-	98	83.405	Vulpes_vulpes
ENSMUSG00000004100	Ppan	92	61.785	ENSXETG00000022055	ppan	80	61.785	Xenopus_tropicalis
ENSMUSG00000004100	Ppan	87	62.228	ENSXMAG00000028708	ppan	76	62.228	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000027	ribosomal large subunit assembly	21873635.	IBA	Process
GO:0001560	regulation of cell growth by extracellular stimulus	10873382.	ISO	Process
GO:0005634	nucleus	-	ISO	Component
GO:0030687	preribosome, large subunit precursor	21873635.	IBA	Component