EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000004558 (Gene tree)
Gene ID: 29811
Gene Symbol: Ndrg2
Alias: Ndr2
Full Name: N-myc downstream regulated gene 2
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 8888
Position: chr14: 51905271-51914158
Accession: 1352498
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000226364	-	435	-	-	- (aa)	-	-
ENSMUST00000228164	-	635	-	ENSMUSP00000153830	176 (aa)	-	A0A2I3BPL1
ENSMUST00000226122	-	384	-	-	- (aa)	-	-
ENSMUST00000228620	-	439	-	-	- (aa)	-	-
ENSMUST00000226698	-	508	-	-	- (aa)	-	-
ENSMUST00000227237	-	1060	-	ENSMUSP00000153938	273 (aa)	-	A0A2I3BPW0
ENSMUST00000226184	-	602	-	ENSMUSP00000154135	114 (aa)	-	A0A2I3BQM5
ENSMUST00000226366	-	427	-	-	- (aa)	-	-
ENSMUST00000004673	-	2099	XM_006519098	ENSMUSP00000004673	371 (aa)	XP_006519161	Q9QYG0
ENSMUST00000226528	-	384	-	ENSMUSP00000154716	114 (aa)	-	A0A2I3BS20
ENSMUST00000111632	-	2103	XM_006519099	ENSMUSP00000107259	357 (aa)	XP_006519162	Q9QYG0
ENSMUST00000227402	-	896	-	ENSMUSP00000154279	238 (aa)	-	A0A2I3BQR5
ENSMUST00000228173	-	481	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000004558's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000004558's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000004558	Ndrg2	100	58.763	ENSMUSG00000036564	Ndrg4	98	63.582	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001818	negative regulation of cytokine production	19815093.	IMP	Process
GO:0005634	nucleus	16520977.	IDA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	16520977.	IDA	Component
GO:0005794	Golgi apparatus	-	ISO	Component
GO:0007165	signal transduction	21873635.	IBA	Process
GO:0007165	signal transduction	-	ISO	Process
GO:0007275	multicellular organism development	-	IEA	Process
GO:0007399	nervous system development	-	IEA	Process
GO:0010574	regulation of vascular endothelial growth factor production	19815093.	IMP	Process
GO:0016055	Wnt signaling pathway	-	IEA	Process
GO:0030154	cell differentiation	-	IEA	Process
GO:0042995	cell projection	-	IEA	Component
GO:0048662	negative regulation of smooth muscle cell proliferation	16520977.	IDA	Process
GO:0070373	negative regulation of ERK1 and ERK2 cascade	19815093.	IMP	Process
GO:0090361	regulation of platelet-derived growth factor production	19815093.	IMP	Process
GO:0098978	glutamatergic synapse	-	ISO	Component
GO:0099173	postsynapse organization	-	ISO	Process