EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000004768 (Gene tree)
Gene ID
19335
Gene Symbol
Rab23
Alias
-
Full Name
RAB23%2C member RAS oncogene family
Gene Type
protein_coding
Species
Mus_musculus
Status
putative
Strand
Plus strand
Length
22678 bases
Position
chr1:33719887-33742564
Accession
99833
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000085625MMR_HSR1PF01926.231.5e-0511
ENSMUSP00000110828MMR_HSR1PF01926.231.5e-0511
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000138024-4398-ENSMUSP0000013789664 (aa)-M0QWL7
ENSMUST00000151482-1087--- (aa)--
ENSMUST00000150593-1966--- (aa)--
ENSMUST00000115174-4218-ENSMUSP00000110828237 (aa)-Q9D4I9
ENSMUST00000195006-444--- (aa)--
ENSMUST00000132066-1764--- (aa)--
ENSMUST00000135330-2047--- (aa)--
ENSMUST00000140354-2557--- (aa)--
ENSMUST00000088287-4322XM_006495801ENSMUSP00000085625237 (aa)XP_006495864Q9D4I9
ENSMUST00000122822-437--- (aa)--
Gene Model
Click here to download ENSMUSG00000004768's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000004768's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000004768Rab236639.873ENSMUSG00000030704Rab6a7639.873
ENSMUSG00000004768Rab237235.465ENSMUSG00000073639Rab188335.465
ENSMUSG00000004768Rab236935.119ENSMUSG00000023460Rab126835.119
ENSMUSG00000004768Rab237234.682ENSMUSG00000021062Rab158134.682
ENSMUSG00000004768Rab236830.061ENSMUSG00000064147Rab446230.061
ENSMUSG00000004768Rab237034.337ENSMUSG00000026878Rab147734.337
ENSMUSG00000004768Rab236738.125ENSMUSG00000017831Rab5a7438.125
ENSMUSG00000004768Rab236637.654ENSMUSG00000043463Rab9b8037.654
ENSMUSG00000004768Rab236533.766ENSMUSG00000027519Rab22a7933.766
ENSMUSG00000004768Rab237034.337ENSMUSG00000020149Rab1a8234.337
ENSMUSG00000004768Rab238130.570ENSMUSG00000056515Rab319430.570
ENSMUSG00000004768Rab236131.507ENSMUSG00000025499Hras9231.818
ENSMUSG00000004768Rab237435.227ENSMUSG00000019173Rab5c8135.227
ENSMUSG00000004768Rab237034.337ENSMUSG00000024870Rab1b8334.337
ENSMUSG00000004768Rab236731.765ENSMUSG00000029641Rasl11a6931.765
ENSMUSG00000004768Rab238032.984ENSMUSG00000004771Rab11a9234.752
ENSMUSG00000004768Rab236438.462ENSMUSG00000002059Rab347338.621
ENSMUSG00000004768Rab236531.410ENSMUSG00000030265Kras9432.778
ENSMUSG00000004768Rab237437.500ENSMUSG00000030643Rab3010041.121
ENSMUSG00000004768Rab236737.500ENSMUSG00000000711Rab5b7437.500
ENSMUSG00000004768Rab238632.850ENSMUSG00000022159Rab2b9432.850
ENSMUSG00000004768Rab236536.129ENSMUSG00000028945Rheb8436.129
ENSMUSG00000004768Rab237731.383ENSMUSG00000031104Rab33a7931.383
ENSMUSG00000004768Rab238332.487ENSMUSG00000047187Rab2a9531.863
ENSMUSG00000004768Rab236641.139ENSMUSG00000032549Rab6b7641.139
ENSMUSG00000004768Rab237033.918ENSMUSG00000079477Rab79443.478
ENSMUSG00000004768Rab236833.129ENSMUSG00000083649Rasl2-97433.129
ENSMUSG00000004768Rab237738.172ENSMUSG00000020175Rab366938.172
ENSMUSG00000004768Rab237532.086ENSMUSG00000049907Rasl11b7432.086
ENSMUSG00000004768Rab238231.795ENSMUSG00000008601Rab258931.795
ENSMUSG00000004768Rab236536.538ENSMUSG00000031202Rab39b7336.538
ENSMUSG00000004768Rab238033.508ENSMUSG00000077450Rab11b9735.417
ENSMUSG00000004768Rab236939.394ENSMUSG00000027935Rab138139.394
ENSMUSG00000004768Rab236735.152ENSMUSG00000027739Rab33b7235.152
ENSMUSG00000004768Rab236534.375ENSMUSG00000079316Rab97934.375
ENSMUSG00000004768Rab237333.143ENSMUSG00000020732Rab377933.143
ENSMUSG00000004768Rab236630.909ENSMUSG00000020657Dnajc276030.909
ENSMUSG00000004768Rab236132.192ENSMUSG00000027852Nras9535.862
ENSMUSG00000004768Rab237534.831ENSMUSG00000029518Rab359533.684
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000004768Rab2310093.249ENSG00000112210RAB2310093.249Homo_sapiens
ENSMUSG00000004768Rab239982.479ENSAPOG00000008892rab239982.479Acanthochromis_polyacanthus
ENSMUSG00000004768Rab2310092.827ENSAMEG00000006825RAB2310092.827Ailuropoda_melanoleuca
ENSMUSG00000004768Rab239972.458ENSACIG00000020496rab239972.458Amphilophus_citrinellus
ENSMUSG00000004768Rab239982.203ENSAOCG00000004234rab239982.203Amphiprion_ocellaris
ENSMUSG00000004768Rab239982.203ENSAPEG00000019758rab239982.203Amphiprion_percula
ENSMUSG00000004768Rab239981.356ENSATEG00000020913rab239981.356Anabas_testudineus
ENSMUSG00000004768Rab237492.614ENSAPLG00000003715RAB239992.614Anas_platyrhynchos
ENSMUSG00000004768Rab2310086.555ENSACAG00000006656RAB2310086.555Anolis_carolinensis
ENSMUSG00000004768Rab2310092.827ENSANAG00000027052-10092.827Aotus_nancymaae
ENSMUSG00000004768Rab239981.780ENSACLG00000002819rab239981.780Astatotilapia_calliptera
ENSMUSG00000004768Rab239984.746ENSAMXG00000014960rab239984.746Astyanax_mexicanus
ENSMUSG00000004768Rab2310093.249ENSBTAG00000005362RAB2310093.249Bos_taurus
ENSMUSG00000004768Rab2310092.827ENSCJAG00000010247RAB2310092.827Callithrix_jacchus
ENSMUSG00000004768Rab2310093.671ENSCAFG00000002459RAB2310093.671Canis_familiaris
ENSMUSG00000004768Rab2310093.671ENSCAFG00020015900RAB2310093.671Canis_lupus_dingo
ENSMUSG00000004768Rab2310093.249ENSCHIG00000009815RAB2310093.249Capra_hircus
ENSMUSG00000004768Rab239993.220ENSTSYG00000029126RAB239993.220Carlito_syrichta
ENSMUSG00000004768Rab2310089.030ENSCPOG00000030218RAB2310089.030Cavia_porcellus
ENSMUSG00000004768Rab2310092.405ENSCCAG00000020364RAB2310092.405Cebus_capucinus
ENSMUSG00000004768Rab2310093.249ENSCATG00000027876RAB2310093.249Cercocebus_atys
ENSMUSG00000004768Rab2310090.717ENSCLAG00000000797RAB2310090.717Chinchilla_lanigera
ENSMUSG00000004768Rab2310093.249ENSCSAG00000013438RAB2310093.249Chlorocebus_sabaeus
ENSMUSG00000004768Rab2310086.498ENSCPBG00000022640RAB2310086.498Chrysemys_picta_bellii
ENSMUSG00000004768Rab239966.942ENSCING00000001155-9967.769Ciona_intestinalis
ENSMUSG00000004768Rab239964.286ENSCSAVG00000001356-9964.854Ciona_savignyi
ENSMUSG00000004768Rab2310092.405ENSCANG00000031065RAB2310092.405Colobus_angolensis_palliatus
ENSMUSG00000004768Rab2310094.515ENSCGRG00001008994Rab2310094.515Cricetulus_griseus_chok1gshd
ENSMUSG00000004768Rab239993.644ENSCGRG00000013630Rab2310093.644Cricetulus_griseus_crigri
ENSMUSG00000004768Rab239973.504ENSCSEG00000010565rab239973.504Cynoglossus_semilaevis
ENSMUSG00000004768Rab239980.932ENSCVAG00000020501rab239980.932Cyprinodon_variegatus
ENSMUSG00000004768Rab239983.475ENSDARG00000004151rab239984.188Danio_rerio
ENSMUSG00000004768Rab2310089.873ENSDNOG00000015501RAB2310089.873Dasypus_novemcinctus
ENSMUSG00000004768Rab239991.102ENSDORG00000028344Rab239991.102Dipodomys_ordii
ENSMUSG00000004768Rab239459.009FBgn0037364Rab238259.009Drosophila_melanogaster
ENSMUSG00000004768Rab239764.224ENSEBUG00000010861-9264.224Eptatretus_burgeri
ENSMUSG00000004768Rab2310092.405ENSEASG00005003529RAB2310092.405Equus_asinus_asinus
ENSMUSG00000004768Rab2310092.405ENSECAG00000013427RAB2310092.405Equus_caballus
ENSMUSG00000004768Rab239991.949ENSEEUG00000015045RAB239991.949Erinaceus_europaeus
ENSMUSG00000004768Rab239980.932ENSELUG00000020788rab239982.203Esox_lucius
ENSMUSG00000004768Rab2310093.249ENSFCAG00000044358RAB2310093.249Felis_catus
ENSMUSG00000004768Rab2310085.232ENSFALG00000001708RAB2310085.232Ficedula_albicollis
ENSMUSG00000004768Rab2310089.873ENSFDAG00000014834RAB2310089.873Fukomys_damarensis
ENSMUSG00000004768Rab239980.508ENSFHEG00000023069rab239980.932Fundulus_heteroclitus
ENSMUSG00000004768Rab239982.203ENSGMOG00000005102rab239982.203Gadus_morhua
ENSMUSG00000004768Rab2310084.388ENSGALG00000016279RAB2310084.388Gallus_gallus
ENSMUSG00000004768Rab239980.085ENSGAFG00000007684rab239980.085Gambusia_affinis
ENSMUSG00000004768Rab239981.356ENSGACG00000006151rab239981.356Gasterosteus_aculeatus
ENSMUSG00000004768Rab2310086.920ENSGAGG00000012709RAB2310086.920Gopherus_agassizii
ENSMUSG00000004768Rab239972.881ENSHBUG00000007966rab239972.881Haplochromis_burtoni
ENSMUSG00000004768Rab2310091.983ENSHGLG00000013030-10091.983Heterocephalus_glaber_female
ENSMUSG00000004768Rab2310076.349ENSHGLG00000009371-10076.349Heterocephalus_glaber_female
ENSMUSG00000004768Rab2310091.983ENSHGLG00100005945-10091.983Heterocephalus_glaber_male
ENSMUSG00000004768Rab2310076.349ENSHGLG00100017177-10076.349Heterocephalus_glaber_male
ENSMUSG00000004768Rab239970.339ENSHCOG00000013919rab239970.763Hippocampus_comes
ENSMUSG00000004768Rab239974.576ENSIPUG00000016494rab239975.214Ictalurus_punctatus
ENSMUSG00000004768Rab2310094.093ENSSTOG00000010962RAB2310094.093Ictidomys_tridecemlineatus
ENSMUSG00000004768Rab2310092.827ENSJJAG00000020094Rab2310092.827Jaculus_jaculus
ENSMUSG00000004768Rab239981.780ENSKMAG00000018270rab239981.780Kryptolebias_marmoratus
ENSMUSG00000004768Rab239981.356ENSLBEG00000013176rab239981.356Labrus_bergylta
ENSMUSG00000004768Rab239984.746ENSLACG00000004025RAB239984.746Latimeria_chalumnae
ENSMUSG00000004768Rab239984.810ENSLOCG00000016999rab239984.810Lepisosteus_oculatus
ENSMUSG00000004768Rab2310093.249ENSLAFG00000007209RAB2310093.249Loxodonta_africana
ENSMUSG00000004768Rab2310093.249ENSMFAG00000032369RAB2310093.249Macaca_fascicularis
ENSMUSG00000004768Rab2310093.249ENSMMUG00000018003RAB2310093.249Macaca_mulatta
ENSMUSG00000004768Rab2310093.249ENSMNEG00000037012RAB2310093.249Macaca_nemestrina
ENSMUSG00000004768Rab2310093.249ENSMLEG00000042429RAB2310093.249Mandrillus_leucophaeus
ENSMUSG00000004768Rab239982.203ENSMAMG00000015456rab239982.203Mastacembelus_armatus
ENSMUSG00000004768Rab239981.780ENSMZEG00005005441rab239981.780Maylandia_zebra
ENSMUSG00000004768Rab2310084.388ENSMGAG00000013882RAB2310084.388Meleagris_gallopavo
ENSMUSG00000004768Rab2310093.671ENSMICG00000014037RAB2310093.671Microcebus_murinus
ENSMUSG00000004768Rab2310094.093ENSMOCG00000000444Rab2310094.093Microtus_ochrogaster
ENSMUSG00000004768Rab239972.458ENSMMOG00000007703rab239972.458Mola_mola
ENSMUSG00000004768Rab2310089.873ENSMODG00000018720RAB2310089.873Monodelphis_domestica
ENSMUSG00000004768Rab239980.932ENSMALG00000002136rab239980.932Monopterus_albus
ENSMUSG00000004768Rab2310098.734MGP_CAROLIEiJ_G0014015Rab2310098.734Mus_caroli
ENSMUSG00000004768Rab2310097.890MGP_PahariEiJ_G0027261Rab2310097.890Mus_pahari
ENSMUSG00000004768Rab2310099.578MGP_SPRETEiJ_G0014820Rab2310099.578Mus_spretus
ENSMUSG00000004768Rab2310083.193ENSMPUG00000002642RAB2310083.193Mustela_putorius_furo
ENSMUSG00000004768Rab2310091.983ENSMLUG00000004058RAB2310091.983Myotis_lucifugus
ENSMUSG00000004768Rab2310094.093ENSNGAG00000018038Rab2310094.093Nannospalax_galili
ENSMUSG00000004768Rab239981.780ENSNBRG00000013691rab239981.780Neolamprologus_brichardi
ENSMUSG00000004768Rab2310093.671ENSNLEG00000027830RAB2310093.671Nomascus_leucogenys
ENSMUSG00000004768Rab2310089.873ENSODEG00000016056RAB2310089.873Octodon_degus
ENSMUSG00000004768Rab239981.013ENSONIG00000009749rab239981.013Oreochromis_niloticus
ENSMUSG00000004768Rab2310088.608ENSOANG00000001398RAB2310088.608Ornithorhynchus_anatinus
ENSMUSG00000004768Rab2310093.671ENSOCUG00000004816RAB2310093.671Oryctolagus_cuniculus
ENSMUSG00000004768Rab239980.085ENSORLG00000010115rab239980.085Oryzias_latipes
ENSMUSG00000004768Rab239980.085ENSORLG00020020220rab239980.085Oryzias_latipes_hni
ENSMUSG00000004768Rab239979.237ENSORLG00015004033rab239979.237Oryzias_latipes_hsok
ENSMUSG00000004768Rab239979.661ENSOMEG00000001706rab239979.661Oryzias_melastigma
ENSMUSG00000004768Rab2310092.405ENSOGAG00000005675RAB2310092.405Otolemur_garnettii
ENSMUSG00000004768Rab2310093.249ENSOARG00000005749RAB2310093.249Ovis_aries
ENSMUSG00000004768Rab2310093.249ENSPPAG00000010023RAB2310093.249Pan_paniscus
ENSMUSG00000004768Rab2310092.827ENSPPRG00000012453RAB2310092.827Panthera_pardus
ENSMUSG00000004768Rab2310093.249ENSPTIG00000009435RAB2310093.249Panthera_tigris_altaica
ENSMUSG00000004768Rab2310093.671ENSPTRG00000043341RAB2310093.671Pan_troglodytes
ENSMUSG00000004768Rab2310093.249ENSPANG00000017772RAB2310093.249Papio_anubis
ENSMUSG00000004768Rab238186.528ENSPKIG00000024310rab239586.528Paramormyrops_kingsleyae
ENSMUSG00000004768Rab2310086.498ENSPSIG00000015579RAB2310086.498Pelodiscus_sinensis
ENSMUSG00000004768Rab239971.186ENSPMGG00000008577rab239971.186Periophthalmus_magnuspinnatus
ENSMUSG00000004768Rab2310094.515ENSPEMG00000023271Rab2310094.515Peromyscus_maniculatus_bairdii
ENSMUSG00000004768Rab239966.102ENSPMAG00000006835-9966.102Petromyzon_marinus
ENSMUSG00000004768Rab2310090.295ENSPCIG00000007267RAB2310090.295Phascolarctos_cinereus
ENSMUSG00000004768Rab239980.085ENSPFOG00000011493rab239980.085Poecilia_formosa
ENSMUSG00000004768Rab239979.661ENSPLAG00000011697rab239979.661Poecilia_latipinna
ENSMUSG00000004768Rab239980.085ENSPMEG00000017300rab239980.085Poecilia_mexicana
ENSMUSG00000004768Rab239970.763ENSPREG00000022509rab239971.186Poecilia_reticulata
ENSMUSG00000004768Rab2310093.671ENSPPYG00000016739RAB2310093.671Pongo_abelii
ENSMUSG00000004768Rab2310093.249ENSPCOG00000028471RAB2310093.249Propithecus_coquereli
ENSMUSG00000004768Rab2310083.122ENSPVAG00000017693RAB2310083.122Pteropus_vampyrus
ENSMUSG00000004768Rab239981.780ENSPNYG00000019639rab239981.780Pundamilia_nyererei
ENSMUSG00000004768Rab239985.169ENSPNAG00000024728rab239985.169Pygocentrus_nattereri
ENSMUSG00000004768Rab2310097.046ENSRNOG00000012629Rab2310097.046Rattus_norvegicus
ENSMUSG00000004768Rab2310088.430ENSRBIG00000030547RAB2310088.430Rhinopithecus_bieti
ENSMUSG00000004768Rab2310092.827ENSRROG00000035920RAB2310092.827Rhinopithecus_roxellana
ENSMUSG00000004768Rab2310092.405ENSSBOG00000033237RAB2310092.405Saimiri_boliviensis_boliviensis
ENSMUSG00000004768Rab2310089.873ENSSHAG00000006379RAB2310089.873Sarcophilus_harrisii
ENSMUSG00000004768Rab239985.043ENSSFOG00015012604rab239985.043Scleropages_formosus
ENSMUSG00000004768Rab239980.932ENSSMAG00000006341rab239980.932Scophthalmus_maximus
ENSMUSG00000004768Rab239981.356ENSSDUG00000023508rab239981.356Seriola_dumerili
ENSMUSG00000004768Rab239981.356ENSSLDG00000000287rab239981.356Seriola_lalandi_dorsalis
ENSMUSG00000004768Rab2310091.561ENSSARG00000013689RAB2310091.561Sorex_araneus
ENSMUSG00000004768Rab2310087.764ENSSPUG00000006274RAB2310087.764Sphenodon_punctatus
ENSMUSG00000004768Rab239982.203ENSSPAG00000010373rab239982.203Stegastes_partitus
ENSMUSG00000004768Rab2310091.561ENSSSCG00000029539RAB2310091.561Sus_scrofa
ENSMUSG00000004768Rab2310085.654ENSTGUG00000012794RAB2310085.654Taeniopygia_guttata
ENSMUSG00000004768Rab239979.661ENSTRUG00000015697rab239979.661Takifugu_rubripes
ENSMUSG00000004768Rab239981.356ENSTNIG00000016575rab239981.356Tetraodon_nigroviridis
ENSMUSG00000004768Rab2310093.249ENSUAMG00000013367RAB2310093.249Ursus_americanus
ENSMUSG00000004768Rab2310093.249ENSUMAG00000018629RAB2310093.249Ursus_maritimus
ENSMUSG00000004768Rab238166.492ENSVPAG00000006805RAB2310066.492Vicugna_pacos
ENSMUSG00000004768Rab2310093.249ENSVVUG00000008535RAB2310093.249Vulpes_vulpes
ENSMUSG00000004768Rab239978.903ENSXETG00000004449rab239978.903Xenopus_tropicalis
ENSMUSG00000004768Rab239979.661ENSXCOG00000011864rab239979.661Xiphophorus_couchianus
ENSMUSG00000004768Rab239980.085ENSXMAG00000009387rab239980.085Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000045autophagosome assembly21873635.IBAProcess
GO:0000045autophagosome assembly-ISOProcess
GO:0000166nucleotide binding-IEAFunction
GO:0001843neural tube closure7720556.9636176.IMPProcess
GO:0003924GTPase activity21873635.IBAFunction
GO:0003924GTPase activity-ISOFunction
GO:0005525GTP binding-IEAFunction
GO:0005737cytoplasm-ISOComponent
GO:0005768endosome-IEAComponent
GO:0005776autophagosome21873635.IBAComponent
GO:0005776autophagosome-ISOComponent
GO:0005813centrosome-ISOComponent
GO:0005829cytosol-ISOComponent
GO:0005886plasma membrane16463280.IDAComponent
GO:0005886plasma membrane-ISOComponent
GO:0006886intracellular protein transport21873635.IBAProcess
GO:0006968cellular defense response-ISOProcess
GO:0007165signal transduction11449277.IMPProcess
GO:0007275multicellular organism development-IEAProcess
GO:0007399nervous system development11449277.IMPProcess
GO:0008589regulation of smoothened signaling pathway19004860.IGIProcess
GO:0010008endosome membrane21873635.IBAComponent
GO:0010008endosome membrane16463280.IDAComponent
GO:0015031protein transport-IEAProcess
GO:0016020membrane-IEAComponent
GO:0021513spinal cord dorsal/ventral patterning14603322.16364285.IGIProcess
GO:0021513spinal cord dorsal/ventral patterning15755804.16364285.IMPProcess
GO:0021904dorsal/ventral neural tube patterning7720556.IMPProcess
GO:0030054cell junction-ISOComponent
GO:0031410cytoplasmic vesicle-IEAComponent
GO:0032482Rab protein signal transduction21873635.IBAProcess
GO:0042308negative regulation of protein import into nucleus-ISOProcess
GO:0042733embryonic digit morphogenesis9636176.15755804.IMPProcess
GO:0045335phagocytic vesicle-ISOComponent
GO:0045861negative regulation of proteolysis16364285.IMPProcess
GO:0046039GTP metabolic process-ISOProcess
GO:0060271cilium assembly-ISOProcess
GO:0097094craniofacial suture morphogenesis-ISOProcess

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