EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000004865 (Gene tree)
Gene ID: 20815
Gene Symbol: Srpk1
Alias: SR protein-specific kinase 1
Full Name: serine/arginine-rich protein specific kinase 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 35062
Position: chr17: 28587648-28622709
Accession: 106908
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000233353	-	1035	-	ENSMUSP00000156908	345 (aa)	-	-
ENSMUST00000232751	-	1002	-	ENSMUSP00000156854	307 (aa)	-	-
ENSMUST00000114767	-	1299	-	ENSMUSP00000110415	35 (aa)	-	B2KF32
ENSMUST00000004987	-	2007	-	ENSMUSP00000004987	223 (aa)	-	F8WGJ7
ENSMUST00000126683	-	4956	-	-	- (aa)	-	-
ENSMUST00000233129	-	981	-	ENSMUSP00000156721	280 (aa)	-	UPI000035567C
ENSMUST00000232882	-	1900	-	-	- (aa)	-	-
ENSMUST00000145730	-	516	-	-	- (aa)	-	-
ENSMUST00000136504	-	1091	-	-	- (aa)	-	-
ENSMUST00000145023	-	584	-	-	- (aa)	-	-
ENSMUST00000233440	-	4804	-	-	- (aa)	-	-
ENSMUST00000130643	-	4653	XM_006523958	ENSMUSP00000116259	648 (aa)	XP_006524021	O70551
ENSMUST00000233794	-	620	-	ENSMUSP00000156541	146 (aa)	-	-

Gene Model

Click here to download ENSMUSG00000004865's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000004865's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000004865	Srpk1	100	98.400	ENSG00000096063	SRPK1	100	91.603	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0000245	spliceosomal complex assembly	21873635.	IBA	Process
GO:0000287	magnesium ion binding	9446799.	IDA	Function
GO:0000287	magnesium ion binding	-	ISO	Function
GO:0004672	protein kinase activity	-	IEA	Function
GO:0004674	protein serine/threonine kinase activity	21873635.	IBA	Function
GO:0004674	protein serine/threonine kinase activity	9446799.	IDA	Function
GO:0004674	protein serine/threonine kinase activity	-	ISO	Function
GO:0005515	protein binding	10196197.	IPI	Function
GO:0005524	ATP binding	9446799.	IDA	Function
GO:0005524	ATP binding	-	ISO	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005783	endoplasmic reticulum	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0006468	protein phosphorylation	9446799.	IDA	Process
GO:0006468	protein phosphorylation	-	ISO	Process
GO:0007059	chromosome segregation	-	ISO	Process
GO:0008380	RNA splicing	-	IEA	Process
GO:0010468	regulation of gene expression	21873635.	IBA	Process
GO:0016301	kinase activity	-	IEA	Function
GO:0016310	phosphorylation	-	IEA	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0030154	cell differentiation	-	IEA	Process
GO:0035556	intracellular signal transduction	21873635.	IBA	Process
GO:0035556	intracellular signal transduction	9446799.	IDA	Process
GO:0035556	intracellular signal transduction	-	ISO	Process
GO:0043231	intracellular membrane-bounded organelle	-	IEA	Component
GO:0045070	positive regulation of viral genome replication	-	ISO	Process
GO:0045071	negative regulation of viral genome replication	-	ISO	Process
GO:0050684	regulation of mRNA processing	21873635.	IBA	Process
GO:0050684	regulation of mRNA processing	9446799.	IDA	Process
GO:0050684	regulation of mRNA processing	-	ISO	Process