EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000004929 (Gene tree)
Gene ID: 50492
Gene Symbol: Thop1
Alias: EP24.15
Full Name: thimet oligopeptidase 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 12525
Position: chr10: 81070035-81082559
Accession: 1354165
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000166404	-	935	-	-	- (aa)	-	-
ENSMUST00000171484	-	466	-	-	- (aa)	-	-
ENSMUST00000166015	-	733	-	-	- (aa)	-	-
ENSMUST00000005057	-	2832	-	ENSMUSP00000005057	687 (aa)	-	A0A0R4IZY0
ENSMUST00000167658	-	1877	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000004929's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04614	Renin-angiotensin system	KEGG
mmu05143	African trypanosomiasis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000004929's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000004929	Thop1	99	89.605	ENSG00000172009	THOP1	100	91.716	Homo_sapiens
ENSMUSG00000004929	Thop1	96	64.688	ENSG00000123213	NLN	99	65.217	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004222	metalloendopeptidase activity	21873635.	IBA	Function
GO:0004222	metalloendopeptidase activity	10969067.	IDA	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0005758	mitochondrial intermembrane space	21873635.	IBA	Component
GO:0006508	proteolysis	21873635.	IBA	Process
GO:0006518	peptide metabolic process	21873635.	IBA	Process
GO:0006518	peptide metabolic process	10969067.	IDA	Process
GO:0008233	peptidase activity	-	ISO	Function
GO:0008237	metallopeptidase activity	-	IEA	Function
GO:0016787	hydrolase activity	-	IEA	Function
GO:0035556	intracellular signal transduction	10969067.	IDA	Process
GO:0042277	peptide binding	-	ISO	Function
GO:0046872	metal ion binding	-	IEA	Function