EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000004951 (Gene tree)
Gene ID: 15507
Gene Symbol: Hspb1
Alias: Hsp25
Full Name: heat shock protein 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 1645
Position: chr5: 135887919-135889563
Accession: 96240
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000111155	-	930	-	ENSMUSP00000106785	147 (aa)	-	D3YZ06
ENSMUST00000005077	-	903	-	ENSMUSP00000005077	209 (aa)	-	P14602

Gene Model

Click here to download ENSMUSG00000004951's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04010	MAPK signaling pathway	KEGG
mmu04370	VEGF signaling pathway	KEGG
mmu05146	Amoebiasis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000004951's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000004951	Hspb1	100	84.354	ENSG00000106211	HSPB1	100	83.254	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000502	proteasome complex	-	ISO	Component
GO:0001932	regulation of protein phosphorylation	-	ISO	Process
GO:0005080	protein kinase C binding	15731106.	IDA	Function
GO:0005634	nucleus	11774370.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	11774370.25446099.	IDA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0005886	plasma membrane	14627610.	IDA	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0006469	negative regulation of protein kinase activity	15731106.	IDA	Process
GO:0006986	response to unfolded protein	10859165.	NAS	Process
GO:0008426	protein kinase C inhibitor activity	15731106.	IDA	Function
GO:0010976	positive regulation of neuron projection development	-	ISO	Process
GO:0019901	protein kinase binding	-	ISO	Function
GO:0030018	Z disc	14627610.	IDA	Component
GO:0030424	axon	-	ISO	Component
GO:0030425	dendrite	-	ISO	Component
GO:0031430	M band	-	ISO	Component
GO:0031674	I band	-	ISO	Component
GO:0032731	positive regulation of interleukin-1 beta production	12385642.	IDA	Process
GO:0035556	intracellular signal transduction	-	ISO	Process
GO:0035924	cellular response to vascular endothelial growth factor stimulus	-	ISO	Process
GO:0038033	positive regulation of endothelial cell chemotaxis by VEGF-activated vascular endothelial growth factor receptor signaling pathway	-	ISO	Process
GO:0042535	positive regulation of tumor necrosis factor biosynthetic process	12385642.	IDA	Process
GO:0042802	identical protein binding	-	ISO	Function
GO:0042803	protein homodimerization activity	-	ISO	Function
GO:0043122	regulation of I-kappaB kinase/NF-kappaB signaling	12385642.	IDA	Process
GO:0043130	ubiquitin binding	-	ISO	Function
GO:0043204	perikaryon	-	ISO	Component
GO:0043292	contractile fiber	14627610.	IDA	Component
GO:0043536	positive regulation of blood vessel endothelial cell migration	-	ISO	Process
GO:0044183	protein binding involved in protein folding	-	ISO	Function
GO:0045202	synapse	-	ISO	Component
GO:0045766	positive regulation of angiogenesis	-	ISO	Process
GO:0061077	chaperone-mediated protein folding	-	ISO	Process
GO:0097512	cardiac myofibril	-	ISO	Component
GO:0098839	postsynaptic density membrane	-	ISO	Component
GO:0099641	anterograde axonal protein transport	-	ISO	Process
GO:1902176	negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway	15731106.	IDA	Process
GO:1903202	negative regulation of oxidative stress-induced cell death	-	ISO	Process
GO:2001028	positive regulation of endothelial cell chemotaxis	-	ISO	Process
GO:2001234	negative regulation of apoptotic signaling pathway	15731106.	IDA	Process