EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000004996 (Gene tree)
Gene ID: 67873
Gene Symbol: Mri1
Alias: 2410018C20Rik
Full Name: methylthioribose-1-phosphate isomerase 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 7421 bases
Position: chr8:84249906-84257326
Accession: 1915123
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000122623	IF-2B	PF01008.17	1e-78	1	1
ENSMUSP00000117115	IF-2B	PF01008.17	2.1e-51	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000126435	-	2819	-	ENSMUSP00000122623	369 (aa)	-	Q9CQT1
ENSMUST00000005122	-	804	-	ENSMUSP00000005122	158 (aa)	-	F8WI95
ENSMUST00000140850	-	545	-	-	- (aa)	-	-
ENSMUST00000125498	-	684	-	ENSMUSP00000117115	228 (aa)	-	F6YY88
ENSMUST00000127747	-	1065	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000004996's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu00270	Cysteine and methionine metabolism	KEGG
mmu01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000004996's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000004996	Mri1	99	86.376	ENSG00000037757	MRI1	99	86.376	Homo_sapiens
ENSMUSG00000004996	Mri1	96	68.362	ENSAPOG00000009673	mri1	98	68.362	Acanthochromis_polyacanthus
ENSMUSG00000004996	Mri1	97	81.944	ENSAMEG00000012918	MRI1	99	82.500	Ailuropoda_melanoleuca
ENSMUSG00000004996	Mri1	96	68.362	ENSACIG00000009199	mri1	98	68.362	Amphilophus_citrinellus
ENSMUSG00000004996	Mri1	96	68.362	ENSAOCG00000009931	mri1	98	68.362	Amphiprion_ocellaris
ENSMUSG00000004996	Mri1	96	68.362	ENSAPEG00000013553	mri1	98	68.362	Amphiprion_percula
ENSMUSG00000004996	Mri1	96	68.362	ENSATEG00000019410	mri1	98	68.362	Anabas_testudineus
ENSMUSG00000004996	Mri1	96	71.549	ENSACAG00000003475	MRI1	98	71.268	Anolis_carolinensis
ENSMUSG00000004996	Mri1	99	84.741	ENSANAG00000020896	-	99	84.741	Aotus_nancymaae
ENSMUSG00000004996	Mri1	98	76.309	ENSANAG00000035382	-	100	76.309	Aotus_nancymaae
ENSMUSG00000004996	Mri1	96	68.362	ENSACLG00000020412	mri1	98	68.362	Astatotilapia_calliptera
ENSMUSG00000004996	Mri1	96	68.169	ENSAMXG00000011982	mri1	98	68.169	Astyanax_mexicanus
ENSMUSG00000004996	Mri1	97	86.275	ENSBTAG00000002524	MRI1	90	86.275	Bos_taurus
ENSMUSG00000004996	Mri1	94	42.939	WBGene00007236	C01G10.9	92	42.939	Caenorhabditis_elegans
ENSMUSG00000004996	Mri1	96	85.112	ENSCJAG00000044187	MRI1	95	85.112	Callithrix_jacchus
ENSMUSG00000004996	Mri1	99	84.469	ENSCAFG00000016615	MRI1	99	85.955	Canis_familiaris
ENSMUSG00000004996	Mri1	96	85.955	ENSCAFG00020006659	MRI1	99	85.955	Canis_lupus_dingo
ENSMUSG00000004996	Mri1	99	85.559	ENSCHIG00000019343	MRI1	99	85.559	Capra_hircus
ENSMUSG00000004996	Mri1	82	76.190	ENSTSYG00000034486	MRI1	100	77.143	Carlito_syrichta
ENSMUSG00000004996	Mri1	81	85.106	ENSCAPG00000015487	MRI1	99	84.810	Cavia_aperea
ENSMUSG00000004996	Mri1	98	81.994	ENSCPOG00000013191	MRI1	99	81.994	Cavia_porcellus
ENSMUSG00000004996	Mri1	99	84.196	ENSCCAG00000014292	-	98	84.196	Cebus_capucinus
ENSMUSG00000004996	Mri1	98	76.584	ENSCCAG00000035484	-	100	76.584	Cebus_capucinus
ENSMUSG00000004996	Mri1	99	82.803	ENSCATG00000029747	MRI1	99	70.300	Cercocebus_atys
ENSMUSG00000004996	Mri1	97	83.287	ENSCLAG00000013025	MRI1	99	83.287	Chinchilla_lanigera
ENSMUSG00000004996	Mri1	99	84.718	ENSCSAG00000006463	MRI1	99	84.718	Chlorocebus_sabaeus
ENSMUSG00000004996	Mri1	76	41.667	ENSCING00000000162	-	99	51.759	Ciona_intestinalis
ENSMUSG00000004996	Mri1	95	56.447	ENSCSAVG00000003107	-	98	55.874	Ciona_savignyi
ENSMUSG00000004996	Mri1	88	87.346	ENSCANG00000043216	MRI1	91	87.346	Colobus_angolensis_palliatus
ENSMUSG00000004996	Mri1	100	93.225	ENSCGRG00001015655	MRI1	100	93.225	Cricetulus_griseus_chok1gshd
ENSMUSG00000004996	Mri1	100	93.225	ENSCGRG00000005697	MRI1	100	93.225	Cricetulus_griseus_crigri
ENSMUSG00000004996	Mri1	96	67.797	ENSCSEG00000011410	mri1	98	67.797	Cynoglossus_semilaevis
ENSMUSG00000004996	Mri1	96	68.362	ENSCVAG00000023215	mri1	98	68.362	Cyprinodon_variegatus
ENSMUSG00000004996	Mri1	96	67.797	ENSDARG00000075754	mri1	96	76.023	Danio_rerio
ENSMUSG00000004996	Mri1	97	82.353	ENSDNOG00000047045	MRI1	99	82.353	Dasypus_novemcinctus
ENSMUSG00000004996	Mri1	98	82.271	ENSDORG00000010875	Mri1	99	82.271	Dipodomys_ordii
ENSMUSG00000004996	Mri1	96	56.233	FBgn0039849	CG11334	99	55.956	Drosophila_melanogaster
ENSMUSG00000004996	Mri1	99	78.981	ENSETEG00000017174	MRI1	99	85.079	Echinops_telfairi
ENSMUSG00000004996	Mri1	96	59.270	ENSEBUG00000014184	mri1	99	59.270	Eptatretus_burgeri
ENSMUSG00000004996	Mri1	96	83.427	ENSEASG00005000151	MRI1	99	83.427	Equus_asinus_asinus
ENSMUSG00000004996	Mri1	96	83.989	ENSECAG00000010706	MRI1	99	83.989	Equus_caballus
ENSMUSG00000004996	Mri1	96	61.017	ENSELUG00000016174	mri1	98	61.582	Esox_lucius
ENSMUSG00000004996	Mri1	99	80.255	ENSFCAG00000011508	MRI1	97	80.636	Felis_catus
ENSMUSG00000004996	Mri1	82	84.211	ENSFDAG00000017424	MRI1	92	84.454	Fukomys_damarensis
ENSMUSG00000004996	Mri1	96	68.644	ENSFHEG00000009358	MRI1	98	68.644	Fundulus_heteroclitus
ENSMUSG00000004996	Mri1	91	61.128	ENSGMOG00000002273	mri1	97	61.128	Gadus_morhua
ENSMUSG00000004996	Mri1	90	58.507	ENSGALG00000034575	MRI1	96	58.209	Gallus_gallus
ENSMUSG00000004996	Mri1	96	68.079	ENSGAFG00000010575	mri1	98	68.079	Gambusia_affinis
ENSMUSG00000004996	Mri1	91	68.249	ENSGACG00000018995	mri1	99	68.249	Gasterosteus_aculeatus
ENSMUSG00000004996	Mri1	98	73.961	ENSGAGG00000010411	MRI1	100	73.130	Gopherus_agassizii
ENSMUSG00000004996	Mri1	99	86.104	ENSGGOG00000006628	MRI1	99	86.104	Gorilla_gorilla
ENSMUSG00000004996	Mri1	96	68.362	ENSHBUG00000018620	mri1	98	68.362	Haplochromis_burtoni
ENSMUSG00000004996	Mri1	96	85.112	ENSHGLG00000010969	MRI1	98	85.112	Heterocephalus_glaber_female
ENSMUSG00000004996	Mri1	96	79.832	ENSHGLG00100007151	MRI1	99	79.832	Heterocephalus_glaber_male
ENSMUSG00000004996	Mri1	96	67.797	ENSHCOG00000014695	mri1	98	67.797	Hippocampus_comes
ENSMUSG00000004996	Mri1	96	68.927	ENSIPUG00000008756	mri1	98	68.927	Ictalurus_punctatus
ENSMUSG00000004996	Mri1	96	85.028	ENSSTOG00000020750	MRI1	98	85.028	Ictidomys_tridecemlineatus
ENSMUSG00000004996	Mri1	99	84.658	ENSJJAG00000018104	Mri1	99	84.658	Jaculus_jaculus
ENSMUSG00000004996	Mri1	96	68.362	ENSKMAG00000018700	mri1	98	68.362	Kryptolebias_marmoratus
ENSMUSG00000004996	Mri1	96	67.797	ENSLBEG00000004998	mri1	98	67.797	Labrus_bergylta
ENSMUSG00000004996	Mri1	96	68.362	ENSLACG00000006845	MRI1	99	68.362	Latimeria_chalumnae
ENSMUSG00000004996	Mri1	97	76.190	ENSLAFG00000012910	MRI1	100	76.190	Loxodonta_africana
ENSMUSG00000004996	Mri1	99	82.803	ENSMFAG00000044250	MRI1	99	87.937	Macaca_fascicularis
ENSMUSG00000004996	Mri1	99	86.104	ENSMMUG00000018068	MRI1	99	86.104	Macaca_mulatta
ENSMUSG00000004996	Mri1	99	86.104	ENSMNEG00000002628	MRI1	91	86.104	Macaca_nemestrina
ENSMUSG00000004996	Mri1	99	86.376	ENSMLEG00000035138	MRI1	99	86.376	Mandrillus_leucophaeus
ENSMUSG00000004996	Mri1	96	67.797	ENSMAMG00000011686	mri1	98	67.797	Mastacembelus_armatus
ENSMUSG00000004996	Mri1	96	68.362	ENSMZEG00005007657	mri1	98	68.362	Maylandia_zebra
ENSMUSG00000004996	Mri1	71	93.548	ENSMAUG00000003451	Mri1	99	93.548	Mesocricetus_auratus
ENSMUSG00000004996	Mri1	99	84.469	ENSMICG00000031875	MRI1	99	84.469	Microcebus_murinus
ENSMUSG00000004996	Mri1	99	94.262	ENSMOCG00000009591	Mri1	99	94.262	Microtus_ochrogaster
ENSMUSG00000004996	Mri1	96	68.362	ENSMMOG00000021373	mri1	68	68.362	Mola_mola
ENSMUSG00000004996	Mri1	96	77.746	ENSMODG00000011870	MRI1	100	77.746	Monodelphis_domestica
ENSMUSG00000004996	Mri1	96	67.232	ENSMALG00000006021	mri1	98	67.232	Monopterus_albus
ENSMUSG00000004996	Mri1	100	99.187	MGP_CAROLIEiJ_G0031299	Mri1	100	99.187	Mus_caroli
ENSMUSG00000004996	Mri1	100	97.019	MGP_PahariEiJ_G0022905	Mri1	100	97.019	Mus_pahari
ENSMUSG00000004996	Mri1	100	100.000	MGP_SPRETEiJ_G0032417	Mri1	100	100.000	Mus_spretus
ENSMUSG00000004996	Mri1	97	87.115	ENSMPUG00000003316	MRI1	99	87.115	Mustela_putorius_furo
ENSMUSG00000004996	Mri1	99	82.803	ENSMLUG00000004766	MRI1	99	85.634	Myotis_lucifugus
ENSMUSG00000004996	Mri1	98	87.879	ENSNGAG00000022102	Mri1	100	87.879	Nannospalax_galili
ENSMUSG00000004996	Mri1	96	60.674	ENSNBRG00000023766	mri1	98	60.674	Neolamprologus_brichardi
ENSMUSG00000004996	Mri1	99	86.849	ENSNLEG00000013138	MRI1	99	86.849	Nomascus_leucogenys
ENSMUSG00000004996	Mri1	99	72.611	ENSMEUG00000013717	MRI1	97	64.873	Notamacropus_eugenii
ENSMUSG00000004996	Mri1	79	84.239	ENSOPRG00000008859	-	99	85.870	Ochotona_princeps
ENSMUSG00000004996	Mri1	77	84.270	ENSOPRG00000015475	-	100	86.047	Ochotona_princeps
ENSMUSG00000004996	Mri1	99	81.918	ENSODEG00000019755	-	99	81.918	Octodon_degus
ENSMUSG00000004996	Mri1	99	80.255	ENSODEG00000010083	-	95	83.476	Octodon_degus
ENSMUSG00000004996	Mri1	96	68.362	ENSONIG00000017732	mri1	98	68.362	Oreochromis_niloticus
ENSMUSG00000004996	Mri1	85	78.981	ENSOANG00000012399	MRI1	97	78.981	Ornithorhynchus_anatinus
ENSMUSG00000004996	Mri1	99	81.529	ENSOCUG00000024840	MRI1	98	82.865	Oryctolagus_cuniculus
ENSMUSG00000004996	Mri1	96	67.797	ENSORLG00000011911	mri1	98	67.797	Oryzias_latipes
ENSMUSG00000004996	Mri1	96	67.797	ENSORLG00020005135	MRI1	98	67.797	Oryzias_latipes_hni
ENSMUSG00000004996	Mri1	96	67.797	ENSORLG00015003701	MRI1	98	67.797	Oryzias_latipes_hsok
ENSMUSG00000004996	Mri1	91	63.988	ENSOMEG00000013120	mri1	99	63.988	Oryzias_melastigma
ENSMUSG00000004996	Mri1	98	83.425	ENSOGAG00000007183	MRI1	99	83.425	Otolemur_garnettii
ENSMUSG00000004996	Mri1	99	70.620	ENSOARG00000008222	MRI1	99	70.620	Ovis_aries
ENSMUSG00000004996	Mri1	99	75.477	ENSPPAG00000033346	MRI1	99	74.114	Pan_paniscus
ENSMUSG00000004996	Mri1	98	85.319	ENSPPRG00000006539	MRI1	98	85.319	Panthera_pardus
ENSMUSG00000004996	Mri1	97	85.714	ENSPTIG00000005216	MRI1	99	85.714	Panthera_tigris_altaica
ENSMUSG00000004996	Mri1	99	85.559	ENSPTRG00000010563	MRI1	99	85.559	Pan_troglodytes
ENSMUSG00000004996	Mri1	99	86.376	ENSPANG00000010977	MRI1	99	86.376	Papio_anubis
ENSMUSG00000004996	Mri1	96	60.169	ENSPKIG00000003387	mri1	98	59.322	Paramormyrops_kingsleyae
ENSMUSG00000004996	Mri1	57	79.699	ENSPSIG00000004574	MRI1	89	80.814	Pelodiscus_sinensis
ENSMUSG00000004996	Mri1	96	68.644	ENSPMGG00000016429	mri1	98	68.644	Periophthalmus_magnuspinnatus
ENSMUSG00000004996	Mri1	100	93.225	ENSPEMG00000006105	Mri1	100	93.225	Peromyscus_maniculatus_bairdii
ENSMUSG00000004996	Mri1	96	63.099	ENSPMAG00000006128	mri1	99	63.099	Petromyzon_marinus
ENSMUSG00000004996	Mri1	96	76.966	ENSPCIG00000019032	MRI1	99	76.966	Phascolarctos_cinereus
ENSMUSG00000004996	Mri1	96	68.644	ENSPFOG00000004311	mri1	98	68.644	Poecilia_formosa
ENSMUSG00000004996	Mri1	96	68.362	ENSPLAG00000010852	mri1	98	68.362	Poecilia_latipinna
ENSMUSG00000004996	Mri1	96	68.644	ENSPMEG00000014113	mri1	98	68.644	Poecilia_mexicana
ENSMUSG00000004996	Mri1	82	71.053	ENSPREG00000000422	mri1	81	64.211	Poecilia_reticulata
ENSMUSG00000004996	Mri1	99	80.978	ENSPPYG00000010570	MRI1	99	80.978	Pongo_abelii
ENSMUSG00000004996	Mri1	98	84.211	ENSPCAG00000014275	MRI1	99	84.211	Procavia_capensis
ENSMUSG00000004996	Mri1	88	86.378	ENSPCOG00000021500	MRI1	99	86.378	Propithecus_coquereli
ENSMUSG00000004996	Mri1	99	84.615	ENSPVAG00000006322	MRI1	99	84.615	Pteropus_vampyrus
ENSMUSG00000004996	Mri1	96	68.362	ENSPNYG00000001542	mri1	98	68.362	Pundamilia_nyererei
ENSMUSG00000004996	Mri1	96	67.324	ENSPNAG00000012506	mri1	98	67.324	Pygocentrus_nattereri
ENSMUSG00000004996	Mri1	100	94.580	ENSRNOG00000026211	Mri1	100	94.580	Rattus_norvegicus
ENSMUSG00000004996	Mri1	99	86.376	ENSRBIG00000028556	MRI1	82	86.376	Rhinopithecus_bieti
ENSMUSG00000004996	Mri1	99	86.104	ENSRROG00000031188	MRI1	99	86.104	Rhinopithecus_roxellana
ENSMUSG00000004996	Mri1	93	39.706	YPR118W	-	97	39.066	Saccharomyces_cerevisiae
ENSMUSG00000004996	Mri1	86	85.893	ENSSBOG00000034840	-	98	85.893	Saimiri_boliviensis_boliviensis
ENSMUSG00000004996	Mri1	98	72.176	ENSSBOG00000029825	-	100	72.176	Saimiri_boliviensis_boliviensis
ENSMUSG00000004996	Mri1	96	77.465	ENSSHAG00000011531	MRI1	99	77.465	Sarcophilus_harrisii
ENSMUSG00000004996	Mri1	84	67.203	ENSSFOG00015018651	mri1	95	67.203	Scleropages_formosus
ENSMUSG00000004996	Mri1	96	67.797	ENSSMAG00000004636	mri1	98	67.797	Scophthalmus_maximus
ENSMUSG00000004996	Mri1	96	68.362	ENSSDUG00000002275	mri1	98	68.362	Seriola_dumerili
ENSMUSG00000004996	Mri1	96	68.362	ENSSLDG00000012900	mri1	98	68.362	Seriola_lalandi_dorsalis
ENSMUSG00000004996	Mri1	96	83.708	ENSSARG00000007904	MRI1	98	83.708	Sorex_araneus
ENSMUSG00000004996	Mri1	99	55.313	ENSSPUG00000002937	MRI1	99	55.041	Sphenodon_punctatus
ENSMUSG00000004996	Mri1	96	68.362	ENSSPAG00000008235	mri1	98	68.362	Stegastes_partitus
ENSMUSG00000004996	Mri1	97	86.555	ENSSSCG00000013756	MRI1	90	86.555	Sus_scrofa
ENSMUSG00000004996	Mri1	96	68.927	ENSTRUG00000010929	mri1	98	68.927	Takifugu_rubripes
ENSMUSG00000004996	Mri1	96	67.232	ENSTNIG00000014065	mri1	99	67.232	Tetraodon_nigroviridis
ENSMUSG00000004996	Mri1	65	90.132	ENSTBEG00000008620	MRI1	99	64.127	Tupaia_belangeri
ENSMUSG00000004996	Mri1	99	84.741	ENSTTRG00000010347	MRI1	99	84.741	Tursiops_truncatus
ENSMUSG00000004996	Mri1	97	86.275	ENSUAMG00000015405	MRI1	99	86.275	Ursus_americanus
ENSMUSG00000004996	Mri1	99	82.803	ENSUMAG00000004743	MRI1	99	84.181	Ursus_maritimus
ENSMUSG00000004996	Mri1	99	82.166	ENSVPAG00000011144	-	60	92.105	Vicugna_pacos
ENSMUSG00000004996	Mri1	96	85.674	ENSVVUG00000026734	MRI1	90	85.674	Vulpes_vulpes
ENSMUSG00000004996	Mri1	96	67.131	ENSXETG00000021867	mri1	99	67.131	Xenopus_tropicalis
ENSMUSG00000004996	Mri1	94	64.265	ENSXCOG00000014431	mri1	96	64.265	Xiphophorus_couchianus
ENSMUSG00000004996	Mri1	96	68.927	ENSXMAG00000027505	MRI1	98	68.927	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001650	fibrillar center	-	ISO	Component
GO:0005634	nucleus	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0008652	cellular amino acid biosynthetic process	-	IEA	Process
GO:0009086	methionine biosynthetic process	-	IEA	Process
GO:0016853	isomerase activity	-	IEA	Function
GO:0019509	L-methionine salvage from methylthioadenosine	21873635.	IBA	Process
GO:0042802	identical protein binding	-	ISO	Function
GO:0044237	cellular metabolic process	-	IEA	Process
GO:0044249	cellular biosynthetic process	-	IEA	Process
GO:0046523	S-methyl-5-thioribose-1-phosphate isomerase activity	21873635.	IBA	Function