EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000005103 (Gene tree)
Gene ID: 22388
Gene Symbol: Wdr1
Alias: Aip1|D5Wsu185e|rede
Full Name: WD repeat domain 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 36409
Position: chr5: 38526813-38563221
Accession: 1337100
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000202199	-	3909	-	-	- (aa)	-	-
ENSMUST00000201330	-	353	-	-	- (aa)	-	-
ENSMUST00000201538	-	554	-	-	- (aa)	-	-
ENSMUST00000202496	-	316	-	-	- (aa)	-	-
ENSMUST00000201456	-	659	-	-	- (aa)	-	-
ENSMUST00000202766	-	673	-	-	- (aa)	-	-
ENSMUST00000201260	-	2139	-	ENSMUSP00000143937	333 (aa)	-	A0A0J9YU05
ENSMUST00000005234	-	3089	XM_006503863	ENSMUSP00000005234	606 (aa)	XP_006503926	O88342
ENSMUST00000201150	-	1886	-	-	- (aa)	-	-
ENSMUST00000200909	-	833	-	-	- (aa)	-	-
ENSMUST00000201059	-	682	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000005103's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000005103's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000005103	Wdr1	100	95.215	ENSG00000071127	WDR1	100	95.215	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002446	neutrophil mediated immunity	17515402.	IMP	Process
GO:0003779	actin binding	10036186.	ISO	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0005884	actin filament	20631256.	ISO	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0005911	cell-cell junction	-	ISO	Component
GO:0007605	sensory perception of sound	10036186.	ISO	Process
GO:0008360	regulation of cell shape	25915128.	IMP	Process
GO:0015629	actin cytoskeleton	10036186.	ISO	Component
GO:0030036	actin cytoskeleton organization	24840128.	IMP	Process
GO:0030042	actin filament depolymerization	21873635.	IBA	Process
GO:0030043	actin filament fragmentation	25915128.	IMP	Process
GO:0030054	cell junction	-	ISO	Component
GO:0030220	platelet formation	17515402.	IMP	Process
GO:0030834	regulation of actin filament depolymerization	-	ISO	Process
GO:0030836	positive regulation of actin filament depolymerization	21873635.	IBA	Process
GO:0030836	positive regulation of actin filament depolymerization	24840128.	IGI	Process
GO:0030864	cortical actin cytoskeleton	21873635.	IBA	Component
GO:0030865	cortical cytoskeleton organization	17515402.	IMP	Process
GO:0040011	locomotion	21873635.	IBA	Process
GO:0042247	establishment of planar polarity of follicular epithelium	25915128.	IMP	Process
GO:0042643	actomyosin, actin portion	21873635.	IBA	Component
GO:0042995	cell projection	-	IEA	Component
GO:0043209	myelin sheath	17634366.	HDA	Component
GO:0043297	apical junction assembly	-	ISO	Process
GO:0045199	maintenance of epithelial cell apical/basal polarity	-	ISO	Process
GO:0045214	sarcomere organization	21873635.	IBA	Process
GO:0045214	sarcomere organization	24840128.	IMP	Process
GO:0048713	regulation of oligodendrocyte differentiation	20631256.	ISO	Process
GO:0051015	actin filament binding	21873635.	IBA	Function
GO:0060307	regulation of ventricular cardiac muscle cell membrane repolarization	24840128.	IMP	Process
GO:1990266	neutrophil migration	17515402.	IMP	Process