EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000005981 (Gene tree)
Gene ID: 68015
Gene Symbol: Trap1
Alias: 2410002K23Rik|HSP75
Full Name: TNF receptor-associated protein 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 37857
Position: chr16: 4039971-4077827
Accession: 1915265
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000150354	-	431	-	ENSMUSP00000138307	113 (aa)	-	S4R1P4
ENSMUST00000137945	-	449	-	-	- (aa)	-	-
ENSMUST00000138594	-	621	-	-	- (aa)	-	-
ENSMUST00000006137	-	2320	-	ENSMUSP00000006137	706 (aa)	-	Q9CQN1

Gene Model

Click here to download ENSMUSG00000005981's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000005981's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000005981	Trap1	86	32.282	WBGene00000915	daf-21	92	32.885	Caenorhabditis_elegans
ENSMUSG00000005981	Trap1	90	53.846	FBgn0026761	Trap1	93	53.846	Drosophila_melanogaster
ENSMUSG00000005981	Trap1	86	48.039	FBgn0001233	Hsp83	84	48.039	Drosophila_melanogaster
ENSMUSG00000005981	Trap1	100	88.244	ENSG00000126602	TRAP1	100	94.286	Homo_sapiens
ENSMUSG00000005981	Trap1	90	31.742	ENSG00000166598	HSP90B1	67	59.375	Homo_sapiens
ENSMUSG00000005981	Trap1	86	45.813	ENSG00000080824	HSP90AA1	83	45.813	Homo_sapiens
ENSMUSG00000005981	Trap1	86	46.411	ENSG00000096384	HSP90AB1	84	46.411	Homo_sapiens
ENSMUSG00000005981	Trap1	90	31.601	ENSMUSG00000020048	Hsp90b1	89	32.184	Mus_musculus
ENSMUSG00000005981	Trap1	86	45.813	ENSMUSG00000021270	Hsp90aa1	92	46.277	Mus_musculus
ENSMUSG00000005981	Trap1	86	46.411	ENSMUSG00000023944	Hsp90ab1	86	58.333	Mus_musculus
ENSMUSG00000005981	Trap1	86	44.928	YPL240C	HSP82	85	44.928	Saccharomyces_cerevisiae
ENSMUSG00000005981	Trap1	86	43.961	YMR186W	HSC82	86	43.961	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005739	mitochondrion	14651853.18614015.	HDA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005743	mitochondrial inner membrane	21873635.	IBA	Component
GO:0005743	mitochondrial inner membrane	-	ISO	Component
GO:0005758	mitochondrial intermembrane space	-	ISO	Component
GO:0005759	mitochondrial matrix	-	ISO	Component
GO:0006457	protein folding	-	IEA	Process
GO:0009386	translational attenuation	-	ISO	Process
GO:0016020	membrane	-	IEA	Component
GO:0019901	protein kinase binding	21873635.	IBA	Function
GO:0019901	protein kinase binding	-	ISO	Function
GO:0051082	unfolded protein binding	-	IEA	Function
GO:1901856	negative regulation of cellular respiration	-	ISO	Process
GO:1903751	negative regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide	-	ISO	Process