EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000006215 (Gene tree)
Gene ID: 22642
Gene Symbol: Zbtb17
Alias: Miz1|Zfp100|mZ13
Full Name: zinc finger and BTB domain containing 17
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 23277 bases
Position: chr4:141444654-141467930
Accession: 107410
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000006377	zf-C2H2	PF00096.26	3.6e-60	1	10
ENSMUSP00000006377	zf-C2H2	PF00096.26	3.6e-60	2	10
ENSMUSP00000006377	zf-C2H2	PF00096.26	3.6e-60	3	10
ENSMUSP00000006377	zf-C2H2	PF00096.26	3.6e-60	4	10
ENSMUSP00000006377	zf-C2H2	PF00096.26	3.6e-60	5	10
ENSMUSP00000006377	zf-C2H2	PF00096.26	3.6e-60	6	10
ENSMUSP00000006377	zf-C2H2	PF00096.26	3.6e-60	7	10
ENSMUSP00000006377	zf-C2H2	PF00096.26	3.6e-60	8	10
ENSMUSP00000006377	zf-C2H2	PF00096.26	3.6e-60	9	10
ENSMUSP00000006377	zf-C2H2	PF00096.26	3.6e-60	10	10
ENSMUSP00000006377	zf-met	PF12874.7	3.3e-11	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000142020	-	2973	-	-	- (aa)	-	-
ENSMUST00000123477	-	771	-	-	- (aa)	-	-
ENSMUST00000006377	-	2722	XM_006538727	ENSMUSP00000006377	794 (aa)	XP_006538790	Q60821
ENSMUST00000130482	-	867	-	-	- (aa)	-	-
ENSMUST00000142438	-	3478	-	-	- (aa)	-	-
ENSMUST00000142695	-	785	-	-	- (aa)	-	-
ENSMUST00000144899	-	338	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000006215's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04110	Cell cycle	KEGG
mmu05200	Pathways in cancer	KEGG
mmu05202	Transcriptional misregulation in cancer	KEGG
mmu05222	Small cell lung cancer	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000006215's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000006215	Zbtb17	55	41.083	ENSMUSG00000054519	Zfp867	81	41.083
ENSMUSG00000006215	Zbtb17	63	42.606	ENSMUSG00000023892	Zfp51	82	42.183
ENSMUSG00000006215	Zbtb17	58	40.968	ENSMUSG00000089857	Zfp882	85	42.985
ENSMUSG00000006215	Zbtb17	56	42.731	ENSMUSG00000114923	Gm49345	88	43.974
ENSMUSG00000006215	Zbtb17	58	40.000	ENSMUSG00000030823	9130019O22Rik	67	40.000
ENSMUSG00000006215	Zbtb17	56	38.606	ENSMUSG00000057551	Zfp317	76	40.000
ENSMUSG00000006215	Zbtb17	79	45.175	ENSMUSG00000037730	Mynn	85	46.354
ENSMUSG00000006215	Zbtb17	58	42.042	ENSMUSG00000057396	Zfp759	87	42.560
ENSMUSG00000006215	Zbtb17	61	40.576	ENSMUSG00000063108	Zfp26	79	43.413
ENSMUSG00000006215	Zbtb17	75	38.288	ENSMUSG00000095432	Zfp748	91	44.109
ENSMUSG00000006215	Zbtb17	62	43.182	ENSMUSG00000047603	Zfp235	71	44.248
ENSMUSG00000006215	Zbtb17	56	42.638	ENSMUSG00000074472	Zfp872	83	41.964
ENSMUSG00000006215	Zbtb17	56	43.506	ENSMUSG00000055305	Zfp93	68	43.243
ENSMUSG00000006215	Zbtb17	59	46.746	ENSMUSG00000087598	Zfp111	72	46.746
ENSMUSG00000006215	Zbtb17	63	41.791	ENSMUSG00000069743	Zfp820	83	41.791
ENSMUSG00000006215	Zbtb17	61	43.939	ENSMUSG00000052675	Zfp112	61	43.939
ENSMUSG00000006215	Zbtb17	55	43.322	ENSMUSG00000048728	Zfp454	83	42.424
ENSMUSG00000006215	Zbtb17	58	47.260	ENSMUSG00000091474	2610021A01Rik	54	47.260
ENSMUSG00000006215	Zbtb17	78	39.568	ENSMUSG00000027439	Gzf1	83	39.568
ENSMUSG00000006215	Zbtb17	59	43.976	ENSMUSG00000056019	Zfp709	81	43.976
ENSMUSG00000006215	Zbtb17	58	42.857	ENSMUSG00000012640	Zfp715	68	39.314
ENSMUSG00000006215	Zbtb17	55	44.224	ENSMUSG00000092416	Zfp141	55	44.224
ENSMUSG00000006215	Zbtb17	72	34.627	ENSMUSG00000023902	Zscan10	78	43.165

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000006215	Zbtb17	97	62.313	ENSACLG00000016405	zbtb17	84	72.650	Astatotilapia_calliptera
ENSMUSG00000006215	Zbtb17	98	95.524	ENSCGRG00001019408	Zbtb17	100	95.472	Cricetulus_griseus_chok1gshd
ENSMUSG00000006215	Zbtb17	57	75.180	ENSEBUG00000014704	ZBTB17	88	75.180	Eptatretus_burgeri
ENSMUSG00000006215	Zbtb17	60	78.218	ENSKMAG00000004080	zbtb17	82	76.718	Kryptolebias_marmoratus
ENSMUSG00000006215	Zbtb17	98	96.031	ENSMAUG00000001376	Zbtb17	100	95.844	Mesocricetus_auratus
ENSMUSG00000006215	Zbtb17	98	86.003	ENSMOCG00000005017	Zbtb17	100	90.323	Microtus_ochrogaster
ENSMUSG00000006215	Zbtb17	80	68.639	ENSMALG00000008493	zbtb17	66	78.814	Monopterus_albus
ENSMUSG00000006215	Zbtb17	100	99.496	MGP_CAROLIEiJ_G0026744	Zbtb17	100	99.496	Mus_caroli
ENSMUSG00000006215	Zbtb17	100	99.244	MGP_PahariEiJ_G0029075	Zbtb17	100	99.244	Mus_pahari
ENSMUSG00000006215	Zbtb17	100	100.000	MGP_SPRETEiJ_G0027723	Zbtb17	100	100.000	Mus_spretus
ENSMUSG00000006215	Zbtb17	100	90.692	ENSMLUG00000025202	ZBTB17	100	90.692	Myotis_lucifugus
ENSMUSG00000006215	Zbtb17	79	49.113	ENSNBRG00000021960	zbtb17	90	66.412	Neolamprologus_brichardi
ENSMUSG00000006215	Zbtb17	73	79.579	ENSORLG00015022210	zbtb17	78	79.079	Oryzias_latipes_hsok
ENSMUSG00000006215	Zbtb17	94	77.874	ENSOMEG00000011926	zbtb17	77	77.874	Oryzias_melastigma
ENSMUSG00000006215	Zbtb17	100	96.222	ENSPEMG00000021923	Zbtb17	100	96.222	Peromyscus_maniculatus_bairdii
ENSMUSG00000006215	Zbtb17	59	67.257	ENSPREG00000010261	zbtb17	86	77.605	Poecilia_reticulata
ENSMUSG00000006215	Zbtb17	98	91.128	ENSPVAG00000013802	ZBTB17	100	90.898	Pteropus_vampyrus
ENSMUSG00000006215	Zbtb17	78	71.038	ENSPNYG00000012572	zbtb17	74	68.720	Pundamilia_nyererei
ENSMUSG00000006215	Zbtb17	100	96.754	ENSRNOG00000010436	Zbtb17	100	96.754	Rattus_norvegicus
ENSMUSG00000006215	Zbtb17	61	78.020	ENSSLDG00000013170	zbtb17	93	71.848	Seriola_lalandi_dorsalis
ENSMUSG00000006215	Zbtb17	77	77.966	ENSTRUG00000003277	zbtb17	98	86.992	Takifugu_rubripes
ENSMUSG00000006215	Zbtb17	97	62.562	ENSTNIG00000010902	zbtb17	64	74.131	Tetraodon_nigroviridis
ENSMUSG00000006215	Zbtb17	76	69.884	ENSTBEG00000005023	-	87	84.177	Tupaia_belangeri

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000978	RNA polymerase II proximal promoter sequence-specific DNA binding	-	ISO	Function
GO:0001047	core promoter binding	-	ISO	Function
GO:0001223	transcription coactivator binding	-	ISO	Function
GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	-	ISO	Function
GO:0001702	gastrulation with mouth forming second	14560010.	IMP	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	14560010.	IDA	Function
GO:0003700	DNA-binding transcription factor activity	-	ISO	Function
GO:0005515	protein binding	15752756.18045875.19164764.20190815.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	18045875.	IDA	Component
GO:0007275	multicellular organism development	-	IEA	Process
GO:0007398	ectoderm development	14560010.	IMP	Process
GO:0008134	transcription factor binding	-	ISO	Function
GO:0008285	negative regulation of cell proliferation	-	ISO	Process
GO:0032991	protein-containing complex	-	ISO	Component
GO:0032993	protein-DNA complex	-	ISO	Component
GO:0045893	positive regulation of transcription, DNA-templated	18045875.	IDA	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0071158	positive regulation of cell cycle arrest	-	ISO	Process