EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000006456 (Gene tree)
Gene ID: 56275
Gene Symbol: Rbm14
Alias: 1300007E16Rik|PSP2|p16
Full Name: RNA binding motif protein 14
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 11066 bases
Position: chr19:4800569-4811634
Accession: 1929092
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000109424	RRM_5	PF13893.6	6.3e-08	1	2
ENSMUSP00000109424	RRM_5	PF13893.6	6.3e-08	2	2
ENSMUSP00000006625	RRM_5	PF13893.6	7.7e-08	1	2
ENSMUSP00000006625	RRM_5	PF13893.6	7.7e-08	2	2
ENSMUSP00000109424	RRM_1	PF00076.22	2.6e-28	1	2
ENSMUSP00000109424	RRM_1	PF00076.22	2.6e-28	2	2
ENSMUSP00000006625	RRM_1	PF00076.22	3.2e-28	1	2
ENSMUSP00000006625	RRM_1	PF00076.22	3.2e-28	2	2
ENSMUSP00000137466	RRM_1	PF00076.22	6.6e-19	1	2
ENSMUSP00000137466	RRM_1	PF00076.22	6.6e-19	2	2

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25993413	Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression	IC & MEF	2015	Boucas J	DOI: 10.1371/journal.pone.0125745
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000180008	-	370	-	ENSMUSP00000137466	119 (aa)	-	J3QPT3
ENSMUST00000113793	-	3508	-	ENSMUSP00000109424	614 (aa)	-	E9QL13
ENSMUST00000006625	-	3165	-	ENSMUSP00000006625	669 (aa)	-	Q8C2Q3

Gene Model

Click here to download ENSMUSG00000006456's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000006456's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000006456	Rbm14	94	41.964	ENSMUSG00000094936	Rbm4	97	44.604
ENSMUSG00000006456	Rbm14	94	41.964	ENSMUSG00000033760	Rbm4b	91	44.286
ENSMUSG00000006456	Rbm14	89	31.061	ENSMUSG00000069565	Dazap1	76	31.061
ENSMUSG00000006456	Rbm14	97	99.130	ENSMUSG00000096370	Gm21992	100	96.610

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000006456	Rbm14	100	99.160	ENSG00000239306	RBM14	100	99.160	Homo_sapiens
ENSMUSG00000006456	Rbm14	94	57.018	ENSACAG00000012696	RBM14	99	46.088	Anolis_carolinensis
ENSMUSG00000006456	Rbm14	95	39.437	ENSACAG00000028084	-	85	40.714	Anolis_carolinensis
ENSMUSG00000006456	Rbm14	100	98.206	ENSANAG00000035377	RBM14	100	98.206	Aotus_nancymaae
ENSMUSG00000006456	Rbm14	100	98.505	ENSBTAG00000001225	RBM14	100	98.505	Bos_taurus
ENSMUSG00000006456	Rbm14	100	99.160	ENSCJAG00000001294	RBM14	100	99.160	Callithrix_jacchus
ENSMUSG00000006456	Rbm14	100	98.356	ENSCAFG00000012405	RBM14	100	98.356	Canis_familiaris
ENSMUSG00000006456	Rbm14	100	98.356	ENSCAFG00020015516	RBM14	100	98.356	Canis_lupus_dingo
ENSMUSG00000006456	Rbm14	100	98.505	ENSCHIG00000020952	RBM14	100	98.505	Capra_hircus
ENSMUSG00000006456	Rbm14	100	99.160	ENSTSYG00000000450	RBM14	100	99.160	Carlito_syrichta
ENSMUSG00000006456	Rbm14	85	94.664	ENSCAPG00000012991	RBM14	96	94.664	Cavia_aperea
ENSMUSG00000006456	Rbm14	100	99.160	ENSCPOG00000008019	RBM14	100	99.160	Cavia_porcellus
ENSMUSG00000006456	Rbm14	100	97.907	ENSCCAG00000019303	RBM14	100	97.907	Cebus_capucinus
ENSMUSG00000006456	Rbm14	94	96.429	ENSCCAG00000034251	-	96	96.667	Cebus_capucinus
ENSMUSG00000006456	Rbm14	100	98.356	ENSCATG00000036313	RBM14	100	98.356	Cercocebus_atys
ENSMUSG00000006456	Rbm14	100	99.160	ENSCLAG00000015277	RBM14	100	99.160	Chinchilla_lanigera
ENSMUSG00000006456	Rbm14	99	95.763	ENSCSAG00000008356	-	80	95.763	Chlorocebus_sabaeus
ENSMUSG00000006456	Rbm14	94	63.717	ENSCPBG00000023808	RBM14	99	52.894	Chrysemys_picta_bellii
ENSMUSG00000006456	Rbm14	100	99.160	ENSCANG00000028611	RBM14	100	99.160	Colobus_angolensis_palliatus
ENSMUSG00000006456	Rbm14	100	100.000	ENSCGRG00001024921	Rbm14	100	100.000	Cricetulus_griseus_chok1gshd
ENSMUSG00000006456	Rbm14	100	100.000	ENSCGRG00000010784	Rbm14	100	100.000	Cricetulus_griseus_crigri
ENSMUSG00000006456	Rbm14	100	97.907	ENSDNOG00000043225	RBM14	100	97.907	Dasypus_novemcinctus
ENSMUSG00000006456	Rbm14	100	99.160	ENSDORG00000002474	Rbm14	100	99.160	Dipodomys_ordii
ENSMUSG00000006456	Rbm14	99	42.857	ENSEBUG00000008661	-	62	43.038	Eptatretus_burgeri
ENSMUSG00000006456	Rbm14	100	98.356	ENSEASG00005005062	RBM14	100	98.356	Equus_asinus_asinus
ENSMUSG00000006456	Rbm14	100	98.356	ENSECAG00000022859	RBM14	100	98.356	Equus_caballus
ENSMUSG00000006456	Rbm14	100	99.160	ENSFCAG00000007392	RBM14	100	99.160	Felis_catus
ENSMUSG00000006456	Rbm14	94	59.821	ENSFALG00000002071	RBM14	100	41.022	Ficedula_albicollis
ENSMUSG00000006456	Rbm14	100	99.160	ENSFDAG00000002787	RBM14	100	99.160	Fukomys_damarensis
ENSMUSG00000006456	Rbm14	95	55.752	ENSGMOG00000009633	rbm14b	65	55.752	Gadus_morhua
ENSMUSG00000006456	Rbm14	94	63.717	ENSGALG00000035260	RBM14	96	52.823	Gallus_gallus
ENSMUSG00000006456	Rbm14	94	57.143	ENSGACG00000019028	rbm14b	65	57.143	Gasterosteus_aculeatus
ENSMUSG00000006456	Rbm14	84	52.039	ENSGAGG00000008555	-	99	50.310	Gopherus_agassizii
ENSMUSG00000006456	Rbm14	99	63.025	ENSGAGG00000001366	-	84	63.025	Gopherus_agassizii
ENSMUSG00000006456	Rbm14	100	98.356	ENSGGOG00000014455	RBM14	100	98.356	Gorilla_gorilla
ENSMUSG00000006456	Rbm14	100	98.319	ENSHGLG00000012589	RBM14	100	98.319	Heterocephalus_glaber_female
ENSMUSG00000006456	Rbm14	100	97.479	ENSHGLG00100011836	RBM14	100	97.479	Heterocephalus_glaber_male
ENSMUSG00000006456	Rbm14	95	56.637	ENSHCOG00000012571	rbm14b	97	56.637	Hippocampus_comes
ENSMUSG00000006456	Rbm14	100	99.160	ENSSTOG00000009796	RBM14	100	99.160	Ictidomys_tridecemlineatus
ENSMUSG00000006456	Rbm14	100	99.160	ENSJJAG00000020814	Rbm14	100	99.160	Jaculus_jaculus
ENSMUSG00000006456	Rbm14	94	55.357	ENSLACG00000017750	-	54	53.947	Latimeria_chalumnae
ENSMUSG00000006456	Rbm14	84	92.487	ENSLAFG00000009086	RBM14	100	92.487	Loxodonta_africana
ENSMUSG00000006456	Rbm14	100	98.356	ENSMFAG00000003827	RBM4	100	98.356	Macaca_fascicularis
ENSMUSG00000006456	Rbm14	100	98.356	ENSMMUG00000020363	RBM14	100	98.356	Macaca_mulatta
ENSMUSG00000006456	Rbm14	100	98.505	ENSMNEG00000014872	RBM14	100	98.505	Macaca_nemestrina
ENSMUSG00000006456	Rbm14	100	99.160	ENSMLEG00000024601	RBM14	100	99.160	Mandrillus_leucophaeus
ENSMUSG00000006456	Rbm14	97	63.248	ENSMGAG00000016129	-	97	63.248	Meleagris_gallopavo
ENSMUSG00000006456	Rbm14	100	100.000	ENSMAUG00000017509	Rbm14	100	100.000	Mesocricetus_auratus
ENSMUSG00000006456	Rbm14	100	98.206	ENSMICG00000031929	RBM14	100	98.206	Microcebus_murinus
ENSMUSG00000006456	Rbm14	100	100.000	ENSMOCG00000002491	Rbm14	100	100.000	Microtus_ochrogaster
ENSMUSG00000006456	Rbm14	99	83.636	ENSMODG00000007884	RBM14	100	83.967	Monodelphis_domestica
ENSMUSG00000006456	Rbm14	100	48.739	ENSMALG00000019079	-	95	50.000	Monopterus_albus
ENSMUSG00000006456	Rbm14	100	100.000	MGP_CAROLIEiJ_G0022517	Rbm14	100	100.000	Mus_caroli
ENSMUSG00000006456	Rbm14	100	100.000	MGP_PahariEiJ_G0014014	Rbm14	100	100.000	Mus_pahari
ENSMUSG00000006456	Rbm14	100	100.000	MGP_SPRETEiJ_G0023431	Rbm14	100	100.000	Mus_spretus
ENSMUSG00000006456	Rbm14	100	98.356	ENSMPUG00000003440	RBM14	100	98.356	Mustela_putorius_furo
ENSMUSG00000006456	Rbm14	100	97.160	ENSMLUG00000015545	-	100	97.160	Myotis_lucifugus
ENSMUSG00000006456	Rbm14	100	93.333	ENSMLUG00000024395	-	100	73.244	Myotis_lucifugus
ENSMUSG00000006456	Rbm14	100	99.160	ENSNGAG00000019304	Rbm14	100	99.160	Nannospalax_galili
ENSMUSG00000006456	Rbm14	100	98.058	ENSNLEG00000006197	RBM14	95	98.058	Nomascus_leucogenys
ENSMUSG00000006456	Rbm14	85	84.091	ENSMEUG00000005742	RBM14	100	84.615	Notamacropus_eugenii
ENSMUSG00000006456	Rbm14	100	97.608	ENSOPRG00000009139	RBM14	100	97.608	Ochotona_princeps
ENSMUSG00000006456	Rbm14	100	99.160	ENSODEG00000017717	RBM14	100	99.160	Octodon_degus
ENSMUSG00000006456	Rbm14	97	89.655	ENSOANG00000001240	-	97	89.655	Ornithorhynchus_anatinus
ENSMUSG00000006456	Rbm14	100	98.505	ENSOCUG00000022838	RBM14	100	98.505	Oryctolagus_cuniculus
ENSMUSG00000006456	Rbm14	100	47.899	ENSOMEG00000006508	-	93	48.980	Oryzias_melastigma
ENSMUSG00000006456	Rbm14	100	97.907	ENSOGAG00000032829	RBM14	100	97.907	Otolemur_garnettii
ENSMUSG00000006456	Rbm14	100	92.697	ENSOARG00000007565	RBM14	100	92.996	Ovis_aries
ENSMUSG00000006456	Rbm14	100	98.206	ENSPPAG00000033403	RBM14	100	98.206	Pan_paniscus
ENSMUSG00000006456	Rbm14	100	99.160	ENSPPRG00000003716	RBM14	100	99.160	Panthera_pardus
ENSMUSG00000006456	Rbm14	86	98.080	ENSPTIG00000016775	RBM14	86	98.080	Panthera_tigris_altaica
ENSMUSG00000006456	Rbm14	100	98.206	ENSPTRG00000003934	RBM14	100	98.206	Pan_troglodytes
ENSMUSG00000006456	Rbm14	100	98.356	ENSPANG00000004924	RBM14	100	98.356	Papio_anubis
ENSMUSG00000006456	Rbm14	97	52.895	ENSPSIG00000003436	RBM14	99	52.640	Pelodiscus_sinensis
ENSMUSG00000006456	Rbm14	100	47.899	ENSPMGG00000018869	-	89	48.966	Periophthalmus_magnuspinnatus
ENSMUSG00000006456	Rbm14	94	92.857	ENSPCIG00000008541	RBM14	92	93.333	Phascolarctos_cinereus
ENSMUSG00000006456	Rbm14	100	98.356	ENSPPYG00000003015	RBM14	100	98.356	Pongo_abelii
ENSMUSG00000006456	Rbm14	94	99.107	ENSPCAG00000003334	RBM14	90	98.492	Procavia_capensis
ENSMUSG00000006456	Rbm14	100	99.160	ENSPCOG00000016329	RBM14	100	99.160	Propithecus_coquereli
ENSMUSG00000006456	Rbm14	94	99.107	ENSPVAG00000010483	RBM14	74	96.099	Pteropus_vampyrus
ENSMUSG00000006456	Rbm14	100	99.402	ENSRNOG00000045568	Rbm14	100	99.402	Rattus_norvegicus
ENSMUSG00000006456	Rbm14	100	98.356	ENSRBIG00000043267	RBM14	100	98.356	Rhinopithecus_bieti
ENSMUSG00000006456	Rbm14	100	98.356	ENSRROG00000044302	RBM14	100	98.356	Rhinopithecus_roxellana
ENSMUSG00000006456	Rbm14	100	99.160	ENSSBOG00000031468	RBM14	100	99.160	Saimiri_boliviensis_boliviensis
ENSMUSG00000006456	Rbm14	84	79.791	ENSSHAG00000008478	RBM14	100	79.617	Sarcophilus_harrisii
ENSMUSG00000006456	Rbm14	94	99.107	ENSSARG00000006530	RBM14	100	91.330	Sorex_araneus
ENSMUSG00000006456	Rbm14	94	69.620	ENSSPUG00000005905	RBM14	100	53.453	Sphenodon_punctatus
ENSMUSG00000006456	Rbm14	100	98.206	ENSSSCG00000038008	RBM14	100	98.206	Sus_scrofa
ENSMUSG00000006456	Rbm14	100	90.433	ENSTBEG00000003641	RBM14	100	90.433	Tupaia_belangeri
ENSMUSG00000006456	Rbm14	94	99.107	ENSTTRG00000011156	RBM14	89	97.761	Tursiops_truncatus
ENSMUSG00000006456	Rbm14	99	98.350	ENSUAMG00000014883	RBM14	99	97.537	Ursus_americanus
ENSMUSG00000006456	Rbm14	86	89.681	ENSUMAG00000011736	RBM14	95	89.681	Ursus_maritimus
ENSMUSG00000006456	Rbm14	98	98.173	ENSVVUG00000010624	RBM14	100	98.197	Vulpes_vulpes
ENSMUSG00000006456	Rbm14	94	61.607	ENSXETG00000026650	rbm14	99	39.846	Xenopus_tropicalis
ENSMUSG00000006456	Rbm14	96	44.737	ENSXETG00000030260	-	56	44.348	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002218	activation of innate immune response	21873635.	IBA	Process
GO:0002218	activation of innate immune response	-	ISO	Process
GO:0002376	immune system process	-	IEA	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005667	transcription factor complex	21873635.	IBA	Component
GO:0005667	transcription factor complex	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0016575	histone deacetylation	-	ISO	Process
GO:0016607	nuclear speck	21873635.	IBA	Component
GO:0016607	nuclear speck	-	ISO	Component
GO:0030374	nuclear receptor transcription coactivator activity	21873635.	IBA	Function
GO:0030374	nuclear receptor transcription coactivator activity	-	ISO	Function
GO:0045087	innate immune response	-	IEA	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0046600	negative regulation of centriole replication	-	ISO	Process
GO:0060395	SMAD protein signal transduction	23390484.	IDA	Process
GO:0098534	centriole assembly	25385835.	IMP	Process
GO:0098534	centriole assembly	-	ISO	Process