EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000006457 (Gene tree)
Gene ID: 11474
Gene Symbol: Actn3
Alias: -
Full Name: actinin alpha 3
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 16687
Position: chr19: 4861223-4877909
Accession: 99678
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000138811	-	982	-	-	- (aa)	-	-
ENSMUST00000006626	-	2880	-	ENSMUSP00000006626	900 (aa)	-	O88990

Gene Model

Click here to download ENSMUSG00000006457's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu05412	Arrhythmogenic right ventricular cardiomyopathy (ARVC)	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000006457's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001649	osteoblast differentiation	21784188.	IMP	Process
GO:0003779	actin binding	-	IEA	Function
GO:0005509	calcium ion binding	-	IEA	Function
GO:0005515	protein binding	11114196.22693585.	IPI	Function
GO:0005865	striated muscle thin filament	8618961.	TAS	Component
GO:0005903	brush border	22114352.	IDA	Component
GO:0006936	muscle contraction	8618961.	IDA	Process
GO:0014728	regulation of the force of skeletal muscle contraction	17828264.	IMP	Process
GO:0014732	skeletal muscle atrophy	24234654.	IMP	Process
GO:0014883	transition between fast and slow fiber	17828264.	IMP	Process
GO:0014894	response to denervation involved in regulation of muscle adaptation	24234654.	IMP	Process
GO:0030017	sarcomere	16585392.24840128.	IDA	Component
GO:0030018	Z disc	20215401.20368620.	IDA	Component
GO:0030674	protein binding, bridging	8618961.	TAS	Function
GO:0031448	positive regulation of fast-twitch skeletal muscle fiber contraction	18178581.	IMP	Process
GO:0042803	protein homodimerization activity	15841212.	TAS	Function
GO:0045820	negative regulation of glycolytic process	17828264.	IMP	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0048633	positive regulation of skeletal muscle tissue growth	18178581.24234654.	IMP	Process
GO:0048743	positive regulation of skeletal muscle fiber development	18178581.	IMP	Process
GO:0051015	actin filament binding	15465019.	IDA	Function
GO:0051015	actin filament binding	8618961.	TAS	Function
GO:0060349	bone morphogenesis	21784188.	IMP	Process
GO:0070885	negative regulation of calcineurin-NFAT signaling cascade	24234654.	IMP	Process
GO:0090257	regulation of muscle system process	18178581.	IMP	Process
GO:0090324	negative regulation of oxidative phosphorylation	18178581.24234654.	IMP	Process
GO:0120163	negative regulation of cold-induced thermogenesis	25590636.	IMP	Process
GO:1900159	positive regulation of bone mineralization involved in bone maturation	21784188.	IMP	Process
GO:1901078	negative regulation of relaxation of muscle	18178581.	IMP	Process
GO:1903715	regulation of aerobic respiration	17828264.	IMP	Process
GO:1904025	positive regulation of glucose catabolic process to lactate via pyruvate	17828264.	IMP	Process