EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000007603 (Gene tree)
Gene ID: 224907
Gene Symbol: Dus3l
Alias: -
Full Name: dihydrouridine synthase 3-like (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 5337 bases
Position: chr17:56764757-56770093
Accession: 2147092
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000007747	Dus	PF01207.17	1.1e-56	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000233290	-	2128	-	-	- (aa)	-	-
ENSMUST00000233549	-	2749	-	-	- (aa)	-	-
ENSMUST00000007747	-	2025	XM_006524161	ENSMUSP00000007747	637 (aa)	XP_006524224	A0A0R4IZY9
ENSMUST00000232684	-	2184	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000007603's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000007603's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000007603	Dus3l	97	82.775	ENSG00000141994	DUS3L	99	91.317	Homo_sapiens
ENSMUSG00000007603	Dus3l	99	59.077	ENSAPOG00000016764	dus3l	97	59.968	Acanthochromis_polyacanthus
ENSMUSG00000007603	Dus3l	99	79.563	ENSAMEG00000012423	-	99	79.444	Ailuropoda_melanoleuca
ENSMUSG00000007603	Dus3l	99	59.014	ENSAOCG00000004343	dus3l	99	59.014	Amphiprion_ocellaris
ENSMUSG00000007603	Dus3l	99	58.923	ENSAPEG00000005828	dus3l	99	58.384	Amphiprion_percula
ENSMUSG00000007603	Dus3l	99	59.571	ENSATEG00000011064	dus3l	98	60.315	Anabas_testudineus
ENSMUSG00000007603	Dus3l	96	65.210	ENSAPLG00000004636	-	100	65.323	Anas_platyrhynchos
ENSMUSG00000007603	Dus3l	81	50.190	ENSACAG00000012955	-	85	50.190	Anolis_carolinensis
ENSMUSG00000007603	Dus3l	100	79.818	ENSANAG00000021997	DUS3L	100	91.036	Aotus_nancymaae
ENSMUSG00000007603	Dus3l	99	59.685	ENSACLG00000011576	dus3l	99	59.685	Astatotilapia_calliptera
ENSMUSG00000007603	Dus3l	98	49.137	ENSAMXG00000043269	dus3l	97	50.000	Astyanax_mexicanus
ENSMUSG00000007603	Dus3l	99	79.020	ENSBTAG00000011842	DUS3L	96	79.843	Bos_taurus
ENSMUSG00000007603	Dus3l	86	48.841	WBGene00021377	Y37E11B.5	94	48.663	Caenorhabditis_elegans
ENSMUSG00000007603	Dus3l	100	79.035	ENSCJAG00000016997	DUS3L	95	91.317	Callithrix_jacchus
ENSMUSG00000007603	Dus3l	97	79.841	ENSCAFG00000018762	DUS3L	99	79.475	Canis_familiaris
ENSMUSG00000007603	Dus3l	97	79.841	ENSCAFG00020018976	-	99	79.475	Canis_lupus_dingo
ENSMUSG00000007603	Dus3l	99	79.020	ENSCHIG00000021327	-	96	79.843	Capra_hircus
ENSMUSG00000007603	Dus3l	95	73.927	ENSCAPG00000012525	DUS3L	100	73.927	Cavia_aperea
ENSMUSG00000007603	Dus3l	99	75.819	ENSCPOG00000021236	DUS3L	96	76.442	Cavia_porcellus
ENSMUSG00000007603	Dus3l	99	80.092	ENSCCAG00000036889	DUS3L	94	91.597	Cebus_capucinus
ENSMUSG00000007603	Dus3l	97	83.043	ENSCATG00000040809	DUS3L	99	92.157	Cercocebus_atys
ENSMUSG00000007603	Dus3l	100	79.380	ENSCLAG00000008470	DUS3L	99	79.690	Chinchilla_lanigera
ENSMUSG00000007603	Dus3l	97	82.726	ENSCSAG00000009883	DUS3L	99	82.280	Chlorocebus_sabaeus
ENSMUSG00000007603	Dus3l	98	61.686	ENSCPBG00000011136	-	98	61.755	Chrysemys_picta_bellii
ENSMUSG00000007603	Dus3l	98	51.905	ENSCING00000004940	zf(c3h)-5	93	55.268	Ciona_intestinalis
ENSMUSG00000007603	Dus3l	86	56.420	ENSCSAVG00000000525	-	100	56.341	Ciona_savignyi
ENSMUSG00000007603	Dus3l	97	83.201	ENSCANG00000036677	DUS3L	99	92.437	Colobus_angolensis_palliatus
ENSMUSG00000007603	Dus3l	97	92.013	ENSCGRG00001023361	Dus3l	97	92.013	Cricetulus_griseus_chok1gshd
ENSMUSG00000007603	Dus3l	97	92.013	ENSCGRG00000005214	Dus3l	97	92.013	Cricetulus_griseus_crigri
ENSMUSG00000007603	Dus3l	97	59.683	ENSCSEG00000014994	dus3l	99	58.604	Cynoglossus_semilaevis
ENSMUSG00000007603	Dus3l	94	55.702	ENSCVAG00000007874	dus3l	97	55.751	Cyprinodon_variegatus
ENSMUSG00000007603	Dus3l	98	59.492	ENSDARG00000099528	dus3l	100	80.357	Danio_rerio
ENSMUSG00000007603	Dus3l	68	71.918	ENSDNOG00000048551	-	94	71.491	Dasypus_novemcinctus
ENSMUSG00000007603	Dus3l	81	85.139	ENSDORG00000006754	Dus3l	97	85.139	Dipodomys_ordii
ENSMUSG00000007603	Dus3l	85	47.834	FBgn0032819	CG10463	94	47.049	Drosophila_melanogaster
ENSMUSG00000007603	Dus3l	56	84.483	ENSETEG00000004749	-	57	84.483	Echinops_telfairi
ENSMUSG00000007603	Dus3l	86	61.319	ENSEBUG00000010532	dus3l	78	61.319	Eptatretus_burgeri
ENSMUSG00000007603	Dus3l	67	69.108	ENSEASG00005023094	-	96	69.383	Equus_asinus_asinus
ENSMUSG00000007603	Dus3l	97	78.072	ENSECAG00000019359	-	99	78.030	Equus_caballus
ENSMUSG00000007603	Dus3l	98	60.374	ENSELUG00000015033	dus3l	97	60.692	Esox_lucius
ENSMUSG00000007603	Dus3l	97	79.014	ENSFCAG00000027534	-	99	90.756	Felis_catus
ENSMUSG00000007603	Dus3l	97	62.370	ENSFALG00000001343	-	99	62.519	Ficedula_albicollis
ENSMUSG00000007603	Dus3l	98	62.776	ENSFDAG00000014182	DUS3L	99	57.609	Fukomys_damarensis
ENSMUSG00000007603	Dus3l	100	59.601	ENSFHEG00000010091	dus3l	98	60.410	Fundulus_heteroclitus
ENSMUSG00000007603	Dus3l	60	75.526	ENSGMOG00000011366	dus3l	99	75.526	Gadus_morhua
ENSMUSG00000007603	Dus3l	97	62.186	ENSGALG00000001800	-	99	62.353	Gallus_gallus
ENSMUSG00000007603	Dus3l	100	59.601	ENSGAFG00000008857	dus3l	97	60.856	Gambusia_affinis
ENSMUSG00000007603	Dus3l	97	58.946	ENSGACG00000004109	dus3l	100	59.871	Gasterosteus_aculeatus
ENSMUSG00000007603	Dus3l	96	64.274	ENSGAGG00000005527	-	99	64.434	Gopherus_agassizii
ENSMUSG00000007603	Dus3l	99	76.425	ENSGGOG00000027433	DUS3L	94	81.513	Gorilla_gorilla
ENSMUSG00000007603	Dus3l	99	59.685	ENSHBUG00000022232	dus3l	99	59.685	Haplochromis_burtoni
ENSMUSG00000007603	Dus3l	99	79.907	ENSHGLG00000013475	DUS3L	99	79.907	Heterocephalus_glaber_female
ENSMUSG00000007603	Dus3l	99	80.062	ENSHGLG00100007077	DUS3L	99	80.062	Heterocephalus_glaber_male
ENSMUSG00000007603	Dus3l	100	59.034	ENSHCOG00000016072	dus3l	98	60.000	Hippocampus_comes
ENSMUSG00000007603	Dus3l	98	62.539	ENSIPUG00000004025	dus3l	97	63.391	Ictalurus_punctatus
ENSMUSG00000007603	Dus3l	100	80.465	ENSSTOG00000025017	DUS3L	100	80.465	Ictidomys_tridecemlineatus
ENSMUSG00000007603	Dus3l	99	81.975	ENSJJAG00000023742	Dus3l	99	81.975	Jaculus_jaculus
ENSMUSG00000007603	Dus3l	100	59.692	ENSKMAG00000009675	dus3l	97	60.476	Kryptolebias_marmoratus
ENSMUSG00000007603	Dus3l	95	57.329	ENSLBEG00000015795	dus3l	95	57.329	Labrus_bergylta
ENSMUSG00000007603	Dus3l	97	58.858	ENSLACG00000001204	dus3l	97	58.858	Latimeria_chalumnae
ENSMUSG00000007603	Dus3l	98	58.285	ENSLOCG00000010531	dus3l	97	58.651	Lepisosteus_oculatus
ENSMUSG00000007603	Dus3l	99	76.507	ENSLAFG00000027552	-	100	75.417	Loxodonta_africana
ENSMUSG00000007603	Dus3l	97	83.201	ENSMFAG00000031910	DUS3L	99	92.437	Macaca_fascicularis
ENSMUSG00000007603	Dus3l	56	92.157	ENSMMUG00000031027	DUS3L	99	92.157	Macaca_mulatta
ENSMUSG00000007603	Dus3l	81	92.070	ENSMNEG00000036509	DUS3L	96	92.070	Macaca_nemestrina
ENSMUSG00000007603	Dus3l	97	83.043	ENSMLEG00000043222	DUS3L	99	92.157	Mandrillus_leucophaeus
ENSMUSG00000007603	Dus3l	97	60.222	ENSMAMG00000015637	dus3l	97	60.380	Mastacembelus_armatus
ENSMUSG00000007603	Dus3l	99	59.528	ENSMZEG00005026661	dus3l	99	59.528	Maylandia_zebra
ENSMUSG00000007603	Dus3l	97	65.008	ENSMGAG00000001547	-	100	65.008	Meleagris_gallopavo
ENSMUSG00000007603	Dus3l	97	91.761	ENSMAUG00000008347	Dus3l	99	91.523	Mesocricetus_auratus
ENSMUSG00000007603	Dus3l	97	81.340	ENSMICG00000007097	DUS3L	96	81.240	Microcebus_murinus
ENSMUSG00000007603	Dus3l	99	91.837	ENSMOCG00000021796	Dus3l	99	91.837	Microtus_ochrogaster
ENSMUSG00000007603	Dus3l	97	60.348	ENSMMOG00000018377	dus3l	97	60.443	Mola_mola
ENSMUSG00000007603	Dus3l	99	65.547	ENSMODG00000001339	-	93	66.170	Monodelphis_domestica
ENSMUSG00000007603	Dus3l	96	58.387	ENSMALG00000007559	dus3l	95	58.387	Monopterus_albus
ENSMUSG00000007603	Dus3l	100	99.058	MGP_CAROLIEiJ_G0021789	Dus3l	100	99.058	Mus_caroli
ENSMUSG00000007603	Dus3l	100	97.174	MGP_PahariEiJ_G0020778	Dus3l	100	97.174	Mus_pahari
ENSMUSG00000007603	Dus3l	100	100.000	MGP_SPRETEiJ_G0022700	Dus3l	100	100.000	Mus_spretus
ENSMUSG00000007603	Dus3l	97	78.537	ENSMPUG00000006188	-	100	77.182	Mustela_putorius_furo
ENSMUSG00000007603	Dus3l	97	79.147	ENSMLUG00000007159	-	99	79.045	Myotis_lucifugus
ENSMUSG00000007603	Dus3l	100	84.891	ENSNGAG00000017157	Dus3l	100	84.891	Nannospalax_galili
ENSMUSG00000007603	Dus3l	100	53.846	ENSNBRG00000015011	dus3l	99	53.846	Neolamprologus_brichardi
ENSMUSG00000007603	Dus3l	97	82.803	ENSNLEG00000013734	DUS3L	88	92.157	Nomascus_leucogenys
ENSMUSG00000007603	Dus3l	78	75.403	ENSMEUG00000014401	-	100	75.403	Notamacropus_eugenii
ENSMUSG00000007603	Dus3l	78	86.607	ENSOPRG00000000954	DUS3L	81	86.607	Ochotona_princeps
ENSMUSG00000007603	Dus3l	100	79.499	ENSODEG00000015771	DUS3L	97	80.614	Octodon_degus
ENSMUSG00000007603	Dus3l	99	58.915	ENSONIG00000019793	dus3l	99	58.915	Oreochromis_niloticus
ENSMUSG00000007603	Dus3l	97	64.606	ENSOANG00000004386	-	96	64.606	Ornithorhynchus_anatinus
ENSMUSG00000007603	Dus3l	98	60.380	ENSORLG00000030245	dus3l	95	60.800	Oryzias_latipes
ENSMUSG00000007603	Dus3l	98	60.539	ENSOMEG00000023500	dus3l	96	60.731	Oryzias_melastigma
ENSMUSG00000007603	Dus3l	100	75.655	ENSOGAG00000016549	DUS3L	96	76.800	Otolemur_garnettii
ENSMUSG00000007603	Dus3l	90	72.758	ENSOARG00000007052	-	96	73.473	Ovis_aries
ENSMUSG00000007603	Dus3l	97	82.567	ENSPPAG00000038054	DUS3L	88	91.597	Pan_paniscus
ENSMUSG00000007603	Dus3l	97	78.855	ENSPPRG00000000633	-	88	90.196	Panthera_pardus
ENSMUSG00000007603	Dus3l	97	82.409	ENSPTRG00000010343	DUS3L	88	91.317	Pan_troglodytes
ENSMUSG00000007603	Dus3l	97	69.649	ENSPANG00000015039	DUS3L	99	84.551	Papio_anubis
ENSMUSG00000007603	Dus3l	95	62.821	ENSPKIG00000018035	dus3l	96	62.821	Paramormyrops_kingsleyae
ENSMUSG00000007603	Dus3l	86	67.067	ENSPSIG00000004965	-	99	65.359	Pelodiscus_sinensis
ENSMUSG00000007603	Dus3l	97	59.069	ENSPMGG00000021422	dus3l	93	59.069	Periophthalmus_magnuspinnatus
ENSMUSG00000007603	Dus3l	99	89.937	ENSPEMG00000020784	Dus3l	99	90.110	Peromyscus_maniculatus_bairdii
ENSMUSG00000007603	Dus3l	98	61.587	ENSPMAG00000007671	dus3l	97	61.624	Petromyzon_marinus
ENSMUSG00000007603	Dus3l	53	86.607	ENSPCIG00000008483	-	96	86.607	Phascolarctos_cinereus
ENSMUSG00000007603	Dus3l	100	59.327	ENSPFOG00000006750	dus3l	97	60.568	Poecilia_formosa
ENSMUSG00000007603	Dus3l	100	59.939	ENSPLAG00000011636	dus3l	97	61.502	Poecilia_latipinna
ENSMUSG00000007603	Dus3l	98	59.335	ENSPMEG00000011343	dus3l	94	60.292	Poecilia_mexicana
ENSMUSG00000007603	Dus3l	97	60.759	ENSPREG00000012315	dus3l	97	60.759	Poecilia_reticulata
ENSMUSG00000007603	Dus3l	97	79.715	ENSPPYG00000009435	DUS3L	97	79.621	Pongo_abelii
ENSMUSG00000007603	Dus3l	53	71.818	ENSPCAG00000005233	-	67	71.818	Procavia_capensis
ENSMUSG00000007603	Dus3l	97	82.456	ENSPCOG00000026203	DUS3L	96	82.353	Propithecus_coquereli
ENSMUSG00000007603	Dus3l	77	92.632	ENSPVAG00000010503	-	77	92.632	Pteropus_vampyrus
ENSMUSG00000007603	Dus3l	99	60.000	ENSPNYG00000009052	dus3l	99	60.000	Pundamilia_nyererei
ENSMUSG00000007603	Dus3l	100	63.063	ENSPNAG00000022347	dus3l	97	64.087	Pygocentrus_nattereri
ENSMUSG00000007603	Dus3l	100	94.192	ENSRNOG00000050381	Dus3l	99	94.192	Rattus_norvegicus
ENSMUSG00000007603	Dus3l	97	73.059	ENSRBIG00000025322	DUS3L	99	72.881	Rhinopithecus_bieti
ENSMUSG00000007603	Dus3l	97	83.360	ENSRROG00000037008	DUS3L	99	92.437	Rhinopithecus_roxellana
ENSMUSG00000007603	Dus3l	85	36.923	YLR401C	-	88	37.521	Saccharomyces_cerevisiae
ENSMUSG00000007603	Dus3l	99	80.121	ENSSBOG00000020402	DUS3L	88	91.597	Saimiri_boliviensis_boliviensis
ENSMUSG00000007603	Dus3l	98	68.692	ENSSHAG00000014156	-	97	69.085	Sarcophilus_harrisii
ENSMUSG00000007603	Dus3l	98	59.843	ENSSFOG00015008797	dus3l	96	60.193	Scleropages_formosus
ENSMUSG00000007603	Dus3l	99	58.537	ENSSMAG00000004896	dus3l	98	59.903	Scophthalmus_maximus
ENSMUSG00000007603	Dus3l	100	59.571	ENSSDUG00000013517	dus3l	99	60.877	Seriola_dumerili
ENSMUSG00000007603	Dus3l	99	60.809	ENSSLDG00000016115	dus3l	98	61.844	Seriola_lalandi_dorsalis
ENSMUSG00000007603	Dus3l	52	81.818	ENSSPUG00000011128	-	94	81.818	Sphenodon_punctatus
ENSMUSG00000007603	Dus3l	99	56.434	ENSSPAG00000018660	dus3l	99	58.293	Stegastes_partitus
ENSMUSG00000007603	Dus3l	97	81.429	ENSSSCG00000040968	-	96	81.429	Sus_scrofa
ENSMUSG00000007603	Dus3l	96	66.880	ENSTGUG00000001021	-	100	67.360	Taeniopygia_guttata
ENSMUSG00000007603	Dus3l	52	68.882	ENSTGUG00000014885	-	100	68.882	Taeniopygia_guttata
ENSMUSG00000007603	Dus3l	100	57.911	ENSTRUG00000013055	dus3l	98	58.517	Takifugu_rubripes
ENSMUSG00000007603	Dus3l	98	60.000	ENSTNIG00000017537	dus3l	99	60.317	Tetraodon_nigroviridis
ENSMUSG00000007603	Dus3l	63	91.873	ENSTTRG00000013600	-	67	91.873	Tursiops_truncatus
ENSMUSG00000007603	Dus3l	97	80.604	ENSUAMG00000024269	-	100	83.948	Ursus_americanus
ENSMUSG00000007603	Dus3l	97	74.451	ENSUMAG00000010831	-	99	74.543	Ursus_maritimus
ENSMUSG00000007603	Dus3l	97	79.524	ENSVVUG00000013781	-	99	79.167	Vulpes_vulpes
ENSMUSG00000007603	Dus3l	100	63.804	ENSXETG00000027405	dus3l	97	65.135	Xenopus_tropicalis
ENSMUSG00000007603	Dus3l	70	67.191	ENSXCOG00000019852	dus3l	100	67.191	Xiphophorus_couchianus
ENSMUSG00000007603	Dus3l	100	58.295	ENSXMAG00000015252	dus3l	98	58.295	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003824	catalytic activity	-	IEA	Function
GO:0008033	tRNA processing	-	IEA	Process
GO:0016491	oxidoreductase activity	-	IEA	Function
GO:0017150	tRNA dihydrouridine synthase activity	21873635.	IBA	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0050660	flavin adenine dinucleotide binding	-	IEA	Function