EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000007836 (Gene tree)
Gene ID: 77134
Gene Symbol: Hnrnpa0
Alias: 1110055B05Rik|3010025E17Rik|Hnrpa0
Full Name: heterogeneous nuclear ribonucleoprotein A0
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 2678 bases
Position: chr13:58125879-58128556
Accession: 1924384
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000007980	RRM_1	PF00076.22	5.2e-31	1	2
ENSMUSP00000007980	RRM_1	PF00076.22	5.2e-31	2	2

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25993413	Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression	IC & MEF	2015	Boucas J	DOI: 10.1371/journal.pone.0125745
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000007980	-	2678	-	ENSMUSP00000007980	305 (aa)	-	Q9CX86

Gene Model

Click here to download ENSMUSG00000007836's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000007836's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000007836	Hnrnpa0	86	34.173	ENSMUSG00000000568	Hnrnpd	100	37.838
ENSMUSG00000007836	Hnrnpa0	56	43.421	ENSMUSG00000045193	Cirbp	94	38.614
ENSMUSG00000007836	Hnrnpa0	56	34.706	ENSMUSG00000029328	Hnrnpdl	51	34.706
ENSMUSG00000007836	Hnrnpa0	96	51.163	ENSMUSG00000046434	Hnrnpa1	68	59.551
ENSMUSG00000007836	Hnrnpa0	59	43.646	ENSMUSG00000054256	Msi1	57	42.949
ENSMUSG00000007836	Hnrnpa0	50	33.113	ENSMUSG00000011257	Pabpc4	55	32.278
ENSMUSG00000007836	Hnrnpa0	59	41.989	ENSMUSG00000069769	Msi2	99	41.228
ENSMUSG00000007836	Hnrnpa0	89	53.137	ENSMUSG00000059005	Hnrnpa3	60	60.894
ENSMUSG00000007836	Hnrnpa0	91	49.640	ENSMUSG00000004980	Hnrnpa2b1	59	55.307
ENSMUSG00000007836	Hnrnpa0	54	35.065	ENSMUSG00000031134	Rbmx	82	33.333
ENSMUSG00000007836	Hnrnpa0	73	34.118	ENSMUSG00000069565	Dazap1	99	34.615
ENSMUSG00000007836	Hnrnpa0	58	35.882	ENSMUSG00000020358	Hnrnpab	57	35.882
ENSMUSG00000007836	Hnrnpa0	50	31.613	ENSMUSG00000054582	Pabpc1l	56	30.864

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000007836	Hnrnpa0	89	87.912	ENSG00000177733	HNRNPA0	88	86.447	Homo_sapiens
ENSMUSG00000007836	Hnrnpa0	59	56.667	ENSAPOG00000014678	-	52	56.742	Acanthochromis_polyacanthus
ENSMUSG00000007836	Hnrnpa0	59	62.011	ENSAPOG00000003364	HNRNPA0	58	63.068	Acanthochromis_polyacanthus
ENSMUSG00000007836	Hnrnpa0	67	52.941	ENSAPOG00000003688	hnrnpa3	50	56.742	Acanthochromis_polyacanthus
ENSMUSG00000007836	Hnrnpa0	77	58.710	ENSAPOG00000003641	hnrnpa3	69	57.143	Acanthochromis_polyacanthus
ENSMUSG00000007836	Hnrnpa0	59	69.061	ENSAPOG00000003387	HNRNPA0	62	69.663	Acanthochromis_polyacanthus
ENSMUSG00000007836	Hnrnpa0	57	56.738	ENSAMEG00000004293	-	66	57.554	Ailuropoda_melanoleuca
ENSMUSG00000007836	Hnrnpa0	70	92.558	ENSAMEG00000016316	HNRNPA0	58	98.889	Ailuropoda_melanoleuca
ENSMUSG00000007836	Hnrnpa0	68	67.633	ENSACIG00000021834	HNRNPA0	78	70.056	Amphilophus_citrinellus
ENSMUSG00000007836	Hnrnpa0	58	63.068	ENSATEG00000003526	-	93	63.068	Anabas_testudineus
ENSMUSG00000007836	Hnrnpa0	89	88.235	ENSANAG00000017086	HNRNPA0	87	86.397	Aotus_nancymaae
ENSMUSG00000007836	Hnrnpa0	95	52.759	ENSACLG00000008973	HNRNPA0	55	59.659	Astatotilapia_calliptera
ENSMUSG00000007836	Hnrnpa0	89	89.011	ENSBTAG00000016929	HNRNPA0	86	86.813	Bos_taurus
ENSMUSG00000007836	Hnrnpa0	89	88.971	ENSCJAG00000006112	HNRNPA0	88	87.500	Callithrix_jacchus
ENSMUSG00000007836	Hnrnpa0	89	87.050	ENSCAFG00000001132	HNRNPA0	88	86.331	Canis_familiaris
ENSMUSG00000007836	Hnrnpa0	89	87.050	ENSCAFG00020008142	HNRNPA0	88	86.331	Canis_lupus_dingo
ENSMUSG00000007836	Hnrnpa0	89	89.706	ENSCHIG00000002602	HNRNPA0	88	88.235	Capra_hircus
ENSMUSG00000007836	Hnrnpa0	89	89.706	ENSCPOG00000026092	HNRNPA0	89	87.500	Cavia_porcellus
ENSMUSG00000007836	Hnrnpa0	89	88.971	ENSCCAG00000010302	HNRNPA0	87	87.500	Cebus_capucinus
ENSMUSG00000007836	Hnrnpa0	89	87.546	ENSCATG00000021167	HNRNPA0	87	86.447	Cercocebus_atys
ENSMUSG00000007836	Hnrnpa0	89	83.456	ENSCLAG00000015132	HNRNPA0	63	100.000	Chinchilla_lanigera
ENSMUSG00000007836	Hnrnpa0	89	87.912	ENSCSAG00000000499	HNRNPA0	89	86.447	Chlorocebus_sabaeus
ENSMUSG00000007836	Hnrnpa0	90	80.364	ENSCPBG00000008738	HNRNPA0	89	79.273	Chrysemys_picta_bellii
ENSMUSG00000007836	Hnrnpa0	89	87.912	ENSCANG00000038062	HNRNPA0	87	86.447	Colobus_angolensis_palliatus
ENSMUSG00000007836	Hnrnpa0	67	44.608	ENSCGRG00001010070	-	57	46.927	Cricetulus_griseus_chok1gshd
ENSMUSG00000007836	Hnrnpa0	96	96.587	ENSCGRG00001005548	Hnrnpa0	88	94.853	Cricetulus_griseus_chok1gshd
ENSMUSG00000007836	Hnrnpa0	67	44.608	ENSCGRG00000007592	-	56	46.927	Cricetulus_griseus_crigri
ENSMUSG00000007836	Hnrnpa0	89	48.162	ENSCGRG00000003686	-	63	56.983	Cricetulus_griseus_crigri
ENSMUSG00000007836	Hnrnpa0	73	52.018	ENSDARG00000059351	hnrnpa3	74	56.425	Danio_rerio
ENSMUSG00000007836	Hnrnpa0	68	55.072	ENSDNOG00000031964	-	60	58.659	Dasypus_novemcinctus
ENSMUSG00000007836	Hnrnpa0	89	85.870	ENSDNOG00000030903	HNRNPA0	87	86.594	Dasypus_novemcinctus
ENSMUSG00000007836	Hnrnpa0	89	44.280	ENSETEG00000007747	-	62	48.045	Echinops_telfairi
ENSMUSG00000007836	Hnrnpa0	62	52.910	ENSEBUG00000016570	HNRNPA0	53	53.933	Eptatretus_burgeri
ENSMUSG00000007836	Hnrnpa0	89	86.397	ENSECAG00000032164	HNRNPA0	88	87.132	Equus_caballus
ENSMUSG00000007836	Hnrnpa0	97	47.973	ENSELUG00000023080	hnrnpa3	62	56.425	Esox_lucius
ENSMUSG00000007836	Hnrnpa0	89	87.956	ENSFCAG00000040261	HNRNPA0	88	85.401	Felis_catus
ENSMUSG00000007836	Hnrnpa0	96	80.808	ENSFALG00000014395	HNRNPA0	81	79.273	Ficedula_albicollis
ENSMUSG00000007836	Hnrnpa0	59	46.961	ENSFDAG00000014067	-	52	47.486	Fukomys_damarensis
ENSMUSG00000007836	Hnrnpa0	72	38.813	ENSFDAG00000018739	-	63	44.693	Fukomys_damarensis
ENSMUSG00000007836	Hnrnpa0	90	73.529	ENSFDAG00000019780	HNRNPA0	75	98.889	Fukomys_damarensis
ENSMUSG00000007836	Hnrnpa0	57	64.000	ENSFHEG00000008390	HNRNPA0	51	64.000	Fundulus_heteroclitus
ENSMUSG00000007836	Hnrnpa0	64	70.440	ENSFHEG00000008384	HNRNPA0	80	70.440	Fundulus_heteroclitus
ENSMUSG00000007836	Hnrnpa0	60	65.027	ENSGMOG00000016232	HNRNPA0	63	65.922	Gadus_morhua
ENSMUSG00000007836	Hnrnpa0	96	81.973	ENSGALG00000006160	HNRNPA0	89	81.319	Gallus_gallus
ENSMUSG00000007836	Hnrnpa0	98	48.993	ENSGACG00000004477	hnrnpa3	59	57.303	Gasterosteus_aculeatus
ENSMUSG00000007836	Hnrnpa0	89	81.022	ENSGAGG00000005632	HNRNPA0	89	80.292	Gopherus_agassizii
ENSMUSG00000007836	Hnrnpa0	59	68.508	ENSHBUG00000023868	HNRNPA0	69	69.101	Haplochromis_burtoni
ENSMUSG00000007836	Hnrnpa0	59	54.696	ENSHGLG00000014577	-	66	55.307	Heterocephalus_glaber_female
ENSMUSG00000007836	Hnrnpa0	89	87.132	ENSHGLG00000018216	HNRNPA0	89	90.074	Heterocephalus_glaber_female
ENSMUSG00000007836	Hnrnpa0	57	67.429	ENSHCOG00000007174	HNRNPA0	96	67.045	Hippocampus_comes
ENSMUSG00000007836	Hnrnpa0	59	56.667	ENSIPUG00000019815	RO32	53	56.425	Ictalurus_punctatus
ENSMUSG00000007836	Hnrnpa0	96	87.075	ENSJJAG00000006954	Hnrnpa0	88	83.883	Jaculus_jaculus
ENSMUSG00000007836	Hnrnpa0	67	51.471	ENSLBEG00000016767	hnrnpa3	57	52.083	Labrus_bergylta
ENSMUSG00000007836	Hnrnpa0	97	64.952	ENSLACG00000014480	HNRNPA0	59	80.556	Latimeria_chalumnae
ENSMUSG00000007836	Hnrnpa0	58	61.783	ENSLAFG00000027712	-	54	63.399	Loxodonta_africana
ENSMUSG00000007836	Hnrnpa0	89	87.912	ENSMFAG00000030522	HNRNPA0	87	86.447	Macaca_fascicularis
ENSMUSG00000007836	Hnrnpa0	59	51.955	ENSMNEG00000038943	-	73	51.955	Macaca_nemestrina
ENSMUSG00000007836	Hnrnpa0	89	87.912	ENSMNEG00000015863	HNRNPA0	87	86.447	Macaca_nemestrina
ENSMUSG00000007836	Hnrnpa0	89	87.546	ENSMLEG00000026629	HNRNPA0	87	86.447	Mandrillus_leucophaeus
ENSMUSG00000007836	Hnrnpa0	68	65.217	ENSMAMG00000017754	HNRNPA0	69	69.886	Mastacembelus_armatus
ENSMUSG00000007836	Hnrnpa0	95	52.759	ENSMZEG00005001055	HNRNPA0	55	59.659	Maylandia_zebra
ENSMUSG00000007836	Hnrnpa0	59	100.000	ENSMAUG00000018485	Hnrnpa0	60	100.000	Mesocricetus_auratus
ENSMUSG00000007836	Hnrnpa0	65	98.378	ENSMODG00000014720	HNRNPA0	71	98.378	Monodelphis_domestica
ENSMUSG00000007836	Hnrnpa0	65	75.281	ENSMODG00000002463	-	95	75.281	Monodelphis_domestica
ENSMUSG00000007836	Hnrnpa0	95	49.828	ENSMALG00000009691	hnrnpa3	75	56.180	Monopterus_albus
ENSMUSG00000007836	Hnrnpa0	100	99.023	MGP_CAROLIEiJ_G0018593	Hnrnpa0	100	99.023	Mus_caroli
ENSMUSG00000007836	Hnrnpa0	100	98.052	MGP_PahariEiJ_G0019657	Hnrnpa0	100	98.052	Mus_pahari
ENSMUSG00000007836	Hnrnpa0	100	97.411	MGP_SPRETEiJ_G0019473	Hnrnpa0	100	97.411	Mus_spretus
ENSMUSG00000007836	Hnrnpa0	89	85.145	ENSMPUG00000019790	HNRNPA0	88	86.957	Mustela_putorius_furo
ENSMUSG00000007836	Hnrnpa0	89	86.765	ENSMLUG00000012683	-	87	87.500	Myotis_lucifugus
ENSMUSG00000007836	Hnrnpa0	59	96.111	ENSMLUG00000028644	-	56	94.652	Myotis_lucifugus
ENSMUSG00000007836	Hnrnpa0	89	87.868	ENSNGAG00000008883	Hnrnpa0	89	87.132	Nannospalax_galili
ENSMUSG00000007836	Hnrnpa0	89	87.546	ENSNLEG00000008518	HNRNPA0	86	87.546	Nomascus_leucogenys
ENSMUSG00000007836	Hnrnpa0	89	88.235	ENSMEUG00000013675	HNRNPA0	87	87.132	Notamacropus_eugenii
ENSMUSG00000007836	Hnrnpa0	89	88.645	ENSODEG00000019566	HNRNPA0	89	87.179	Octodon_degus
ENSMUSG00000007836	Hnrnpa0	89	52.399	ENSODEG00000016578	-	57	60.335	Octodon_degus
ENSMUSG00000007836	Hnrnpa0	67	53.431	ENSORLG00000025332	-	57	58.523	Oryzias_latipes
ENSMUSG00000007836	Hnrnpa0	59	60.000	ENSORLG00000027074	-	79	60.795	Oryzias_latipes
ENSMUSG00000007836	Hnrnpa0	67	53.431	ENSORLG00000025015	-	57	58.523	Oryzias_latipes
ENSMUSG00000007836	Hnrnpa0	96	44.620	ENSORLG00020007109	-	58	61.047	Oryzias_latipes_hni
ENSMUSG00000007836	Hnrnpa0	66	54.229	ENSORLG00020022487	-	62	58.523	Oryzias_latipes_hni
ENSMUSG00000007836	Hnrnpa0	96	47.115	ENSORLG00020008203	-	59	60.894	Oryzias_latipes_hni
ENSMUSG00000007836	Hnrnpa0	95	47.557	ENSORLG00020007505	-	58	62.069	Oryzias_latipes_hni
ENSMUSG00000007836	Hnrnpa0	95	47.297	ENSORLG00015016157	-	60	60.920	Oryzias_latipes_hsok
ENSMUSG00000007836	Hnrnpa0	95	46.984	ENSORLG00015016507	-	55	60.335	Oryzias_latipes_hsok
ENSMUSG00000007836	Hnrnpa0	57	61.143	ENSORLG00015016169	HNRNPA0	59	60.571	Oryzias_latipes_hsok
ENSMUSG00000007836	Hnrnpa0	59	63.687	ENSORLG00015016302	HNRNPA0	57	64.407	Oryzias_latipes_hsok
ENSMUSG00000007836	Hnrnpa0	95	47.440	ENSORLG00015015185	-	60	61.628	Oryzias_latipes_hsok
ENSMUSG00000007836	Hnrnpa0	95	50.166	ENSORLG00015017144	-	58	61.714	Oryzias_latipes_hsok
ENSMUSG00000007836	Hnrnpa0	71	54.128	ENSORLG00015015182	-	77	61.582	Oryzias_latipes_hsok
ENSMUSG00000007836	Hnrnpa0	99	44.516	ENSORLG00015016236	HNRNPA0	59	53.947	Oryzias_latipes_hsok
ENSMUSG00000007836	Hnrnpa0	91	85.455	ENSOGAG00000025754	HNRNPA0	76	98.889	Otolemur_garnettii
ENSMUSG00000007836	Hnrnpa0	90	89.011	ENSOARG00000015434	HNRNPA0	90	87.132	Ovis_aries
ENSMUSG00000007836	Hnrnpa0	89	87.912	ENSPPAG00000005303	HNRNPA0	86	86.447	Pan_paniscus
ENSMUSG00000007836	Hnrnpa0	89	88.278	ENSPPRG00000014655	HNRNPA0	88	86.813	Panthera_pardus
ENSMUSG00000007836	Hnrnpa0	89	87.912	ENSPTRG00000017273	HNRNPA0	86	86.447	Pan_troglodytes
ENSMUSG00000007836	Hnrnpa0	89	87.546	ENSPANG00000012900	HNRNPA0	87	86.447	Papio_anubis
ENSMUSG00000007836	Hnrnpa0	60	72.527	ENSPKIG00000020270	HNRNPA0	63	72.778	Paramormyrops_kingsleyae
ENSMUSG00000007836	Hnrnpa0	59	72.222	ENSPKIG00000020281	-	53	72.472	Paramormyrops_kingsleyae
ENSMUSG00000007836	Hnrnpa0	67	52.941	ENSPKIG00000022916	hnrnpa3	64	56.425	Paramormyrops_kingsleyae
ENSMUSG00000007836	Hnrnpa0	51	55.484	ENSPMGG00000000747	hnrnpa3	72	56.209	Periophthalmus_magnuspinnatus
ENSMUSG00000007836	Hnrnpa0	89	79.412	ENSPEMG00000020274	Hnrnpa0	86	75.000	Peromyscus_maniculatus_bairdii
ENSMUSG00000007836	Hnrnpa0	73	49.776	ENSPMAG00000004449	-	90	50.935	Petromyzon_marinus
ENSMUSG00000007836	Hnrnpa0	64	69.591	ENSPMEG00000017025	HNRNPA0	98	69.591	Poecilia_mexicana
ENSMUSG00000007836	Hnrnpa0	64	69.811	ENSPREG00000010619	HNRNPA0	76	69.375	Poecilia_reticulata
ENSMUSG00000007836	Hnrnpa0	73	50.893	ENSPREG00000005411	hnrnpa3	59	55.307	Poecilia_reticulata
ENSMUSG00000007836	Hnrnpa0	89	87.912	ENSPPYG00000015814	HNRNPA0	88	86.447	Pongo_abelii
ENSMUSG00000007836	Hnrnpa0	89	46.256	ENSPPYG00000012967	-	71	61.875	Pongo_abelii
ENSMUSG00000007836	Hnrnpa0	82	58.824	ENSPNYG00000008424	hnrnpa3	74	57.143	Pundamilia_nyererei
ENSMUSG00000007836	Hnrnpa0	60	69.231	ENSPNAG00000023333	HNRNPA0	94	59.507	Pygocentrus_nattereri
ENSMUSG00000007836	Hnrnpa0	99	97.705	ENSRNOG00000039876	LOC681410	100	97.705	Rattus_norvegicus
ENSMUSG00000007836	Hnrnpa0	89	87.912	ENSRBIG00000023673	HNRNPA0	88	86.447	Rhinopithecus_bieti
ENSMUSG00000007836	Hnrnpa0	58	56.442	ENSRROG00000034643	-	53	56.442	Rhinopithecus_roxellana
ENSMUSG00000007836	Hnrnpa0	89	87.912	ENSRROG00000002558	HNRNPA0	88	86.447	Rhinopithecus_roxellana
ENSMUSG00000007836	Hnrnpa0	59	72.222	ENSSFOG00015002650	HNRNPA0	56	72.222	Scleropages_formosus
ENSMUSG00000007836	Hnrnpa0	67	53.431	ENSSDUG00000000381	hnrnpa3	57	57.303	Seriola_dumerili
ENSMUSG00000007836	Hnrnpa0	89	81.319	ENSSPUG00000016613	HNRNPA0	89	81.319	Sphenodon_punctatus
ENSMUSG00000007836	Hnrnpa0	67	52.941	ENSSPAG00000008969	hnrnpa3	53	56.742	Stegastes_partitus
ENSMUSG00000007836	Hnrnpa0	89	75.636	ENSTGUG00000001186	HNRNPA0	89	74.909	Taeniopygia_guttata
ENSMUSG00000007836	Hnrnpa0	59	59.777	ENSTRUG00000021494	-	59	60.227	Takifugu_rubripes
ENSMUSG00000007836	Hnrnpa0	89	85.294	ENSTTRG00000000499	HNRNPA0	88	86.765	Tursiops_truncatus
ENSMUSG00000007836	Hnrnpa0	89	86.643	ENSVVUG00000014736	HNRNPA0	88	86.643	Vulpes_vulpes
ENSMUSG00000007836	Hnrnpa0	95	70.000	ENSXETG00000003833	hnrnpa0	57	82.123	Xenopus_tropicalis
ENSMUSG00000007836	Hnrnpa0	64	70.000	ENSXMAG00000019804	HNRNPA0	95	70.414	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0006954	inflammatory response	12456657.	IDA	Process
GO:0017091	AU-rich element binding	21873635.	IBA	Function
GO:0017091	AU-rich element binding	12456657.	IDA	Function
GO:0017091	AU-rich element binding	-	ISO	Function
GO:0019901	protein kinase binding	-	ISO	Function
GO:0032496	response to lipopolysaccharide	12456657.	IDA	Process
GO:0070935	3'-UTR-mediated mRNA stabilization	21873635.	IBA	Process
GO:0070935	3'-UTR-mediated mRNA stabilization	12456657.	IDA	Process
GO:1990904	ribonucleoprotein complex	21873635.	IBA	Component